Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: drm
Assembly: GCA_004794745.1
Location: QBLH01002544.1:324285-370997[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.7e-05 0.0013 18.6 2.6 1 23 267 289 267 289 0.98

2 9 2.4e-07 1.9e-05 24.4 0.7 1 21 295 315 295 316 0.95

3 9 1.1e-05 0.00085 19.2 1.9 1 23 319 341 319 341 0.96

4 9 4.9e-08 3.8e-06 26.6 3.6 1 23 347 369 347 369 0.98

5 9 4.5e-05 0.0035 17.3 2.6 1 23 623 645 623 645 0.98

6 9 1.4e-07 1.1e-05 25.1 1.8 1 23 651 673 651 673 0.97

7 9 3.1e-05 0.0024 17.8 1.1 1 23 679 701 679 701 0.96

8 9 6.2e-07 4.8e-05 23.1 2.4 1 23 707 729 707 729 0.98

9 9 7e-05 0.0054 16.7 5.2 1 23 735 757 735 757 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.7e-05	0.0013	18.6	2.6	1	23	267	289	267	289	0.98
2	9	2.4e-07	1.9e-05	24.4	0.7	1	21	295	315	295	316	0.95
3	9	1.1e-05	0.00085	19.2	1.9	1	23	319	341	319	341	0.96
4	9	4.9e-08	3.8e-06	26.6	3.6	1	23	347	369	347	369	0.98
5	9	4.5e-05	0.0035	17.3	2.6	1	23	623	645	623	645	0.98
6	9	1.4e-07	1.1e-05	25.1	1.8	1	23	651	673	651	673	0.97
7	9	3.1e-05	0.0024	17.8	1.1	1	23	679	701	679	701	0.96
8	9	6.2e-07	4.8e-05	23.1	2.4	1	23	707	729	707	729	0.98
9	9	7e-05	0.0054	16.7	5.2	1	23	735	757	735	757	0.97

Sequence Information

Coding Sequence: CGGCAAATACCTCCACCCCCCTCCAACCCTTCCTCGCCCCCTCCCACCCTCGCCGGTGCGTCTTGCGGACGCGTGGCGACGAGTGTGACGACGGCGGCGGGAGAAGCCGCGGTTGTCCACGGGTGGgtagcgtcgcgacgccccgCGGGGTCACCCCAACCCGGAAGCTCCGCCCCTGTGGAAGTCGGGCCGCCAACCGGCGTATCCAGCGCACGGGATACGGTAGGAGGAGCCACCGTGTCGTCATCGTTGGCGCCAGGTAAACGGCGATCCTCTCAGGGCCCGGCCGTGGCACTCGGCCGCTTAGTATCGCGCCGACTCTCGAGCGCGGGGAGGACGCAGATGGAGACAAAAACGGAGCCGCTGACGCCGCCGCAGACGCCACCGACGATTGACAGACCGATGCATCAGCATCAACATCAGCATCAGCATCAGCATCAGCATCAGCAGCAACATCAACATCAACATCAACATCAACATCagcatcagcagcagcagcagcagcagcagcagcatgtGGTTTTTTCAACCTCGAAATGGGCCAAGTCAAACTTCCTCAACGGCAGATACGTCCAGCCGCAACACGTTCAGGCGGCGCACAGCGTTCCTAACAACCATCAGGTCCTCAGTAATTGGTTGAAGGACCCTATCGCGGCCCTGTTCACATTTCGGGGTTGCTGCCCCCAACGCCCTTATCTGTACTATCAGGGTCATCCGGGTATGTTTCCGGTACCGCCACCGCCGCAGCCGCCGTCGTTCCTCGCTCGGAGACCAACGGGTCAGAGGCCCAAGAAACAGTTTATCTGCAAGTTTTGCAATCGACAGTTCACGAAGAGCTACAATCTGCTAATTCACGAAAGGACGCACACCGACGAGCGACCGTACTCGTGCGACATATGCGGAAAGGCTTTCCGCAGGCAGGATCATCTGAGGGATCAtcgTAAGGAGAAACCGTTCAAATGCAACGAGTGCGGCAAAGGTTTCTGCCAAAGTAGGACTCTGGCGGTTCATAAAGTCATGCATATGGAGGAGTCGCCGCACAAGTGCACGATATGCGGTCGGAGCTTCAATCAGAGGAGCAATCTGAAGACGCACCTTCTGACGCACGCGGACGTTCCGCAGGACCTCAGGATCGAGACCTCGGTGTCGTCGGACTCGAGGATCATGTCCTCTACCGAGGTTAGACAAATGGCAGAGCGGAGTGTCGCCCTGCGGCTTCAGGGTGCCCTCCTCTCTGCCCTGCAGCGGGCGGCGCTCCTGCCGCCGGGACACGCCGCCGCGGCGGCGTTTAATCTGCAGGCCCTGGAGACGTACTTGACGCTTCATCGTCTTCATGCGAGCGGCGCGACTTCCGGTGTCGCGCAGACCGCGGGCGCTACCGCGACCGTCGCTGGTAATCAGAGATGTTCGTCGTTGAGCACGAATGTCGACGTGGCCCTGAGTCCGACAGCCATCAAGAATGACCACCTAACGGCGGATCAGCTGCTCCGATCGGCCGCTTCGGCGATAAGCGAGGACGACGAGGCACGGCTGGAGTTCGTGACCGATACCGAAGAGGACCTGGCGCTGCTcacggaggaggaggaagtcCTGCTGAGCGAAACGTCCGGAACGAGCTCCTCTACCGCGAACCACGAGCTGCTTCTACGGCGAATATCCGAAGGGAATCGCGCGAGTACGTCGGTGACGACGGTCTCGCGATCATCGTCTTTGACGGCTCCGACGTCTTTCGCGTCGTCGAGTTCCTCGGGTTGCTCCTCGACCTCGTCCACCTCGTCGTCCTCCTCTTCGTCCGTGCCACACGCTTCGATCGCGATCGACTCGAGTGTACCAAGGACTTGCCGTACGTCCCGACCTAAGAAACAGTTCATTTGTAAGTTCTGCAGCCGGCAATTCACGAAGAGCTACAATCTGTTGATCCACGAGAGGACGCATACCGACGAGCGGCCGTACTCGTGCGATATATGTGGCAAAGCCTTCCGACGGCAGGATCATCTCAGAGATCACAGgTATATACACAGCAAGGAGAAACCGTTTAAATGCGCCGAATGCGGCAAAGGATTTTGCCAGAGCAGGACACTGGCTGTccacaaaattttacatatggAGGAGTCGCCGCACAAATGTCCCGTCTGTGCCAGGAGTTTCAATCAGAGGAGCAATCTGAAAACTCATCTTCTTACGCACACGGATATCAAGCCTTATCATTGCGCCTCATGCGGCAAGGTTTTTCGCAGAAATTGTGATCTGAGGAGACACTCGTTGACTCACAATCTGGGAGTACCGTCGTCGCCACCGCCATCGGTGATACCGGTTTCCGGCTCGAGCACCATTGTTCTTCAGGAGACGTCT
Protein Sequence: RQIPPPPSNPSSPPPTLAGASCGRVATSVTTAAGEAAVVHGWVASRRPAGSPQPGSSAPVEVGPPTGVSSARDTVGGATVSSSLAPGKRRSSQGPAVALGRLVSRRLSSAGRTQMETKTEPLTPPQTPPTIDRPMHQHQHQHQHQHQHQQQHQHQHQHQHQHQQQQQQQQQHVVFSTSKWAKSNFLNGRYVQPQHVQAAHSVPNNHQVLSNWLKDPIAALFTFRGCCPQRPYLYYQGHPGMFPVPPPPQPPSFLARRPTGQRPKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRKEKPFKCNECGKGFCQSRTLAVHKVMHMEESPHKCTICGRSFNQRSNLKTHLLTHADVPQDLRIETSVSSDSRIMSSTEVRQMAERSVALRLQGALLSALQRAALLPPGHAAAAAFNLQALETYLTLHRLHASGATSGVAQTAGATATVAGNQRCSSLSTNVDVALSPTAIKNDHLTADQLLRSAASAISEDDEARLEFVTDTEEDLALLTEEEEVLLSETSGTSSSTANHELLLRRISEGNRASTSVTTVSRSSSLTAPTSFASSSSSGCSSTSSTSSSSSSSVPHASIAIDSSVPRTCRTSRPKKQFICKFCSRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCAECGKGFCQSRTLAVHKILHMEESPHKCPVCARSFNQRSNLKTHLLTHTDIKPYHCASCGKVFRRNCDLRRHSLTHNLGVPSSPPPSVIPVSGSSTIVLQETS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -