Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: mecom-b
Assembly: GCA_004794745.1
Location: QBLH01001065.1:396647-557383[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.75 59 4.0 0.1 1 23 73 96 73 96 0.93

2 11 1.1e-05 0.00087 19.2 0.7 1 23 102 129 102 130 0.93

3 11 6.4e-06 0.0005 19.9 2.6 1 23 136 158 136 158 0.95

4 11 3.9e-05 0.0031 17.4 5.0 1 23 164 186 164 186 0.99

5 11 0.00078 0.061 13.4 0.7 2 21 194 213 193 214 0.95

6 11 9.2e-09 7.2e-07 28.9 1.2 1 23 570 592 570 592 0.99

7 11 4.8e-07 3.8e-05 23.5 1.7 1 23 598 621 598 621 0.97

8 11 1.4e-05 0.0011 18.9 3.4 1 23 627 649 627 649 0.99

9 11 9.2e-09 7.2e-07 28.9 1.2 1 23 1514 1536 1514 1536 0.99

10 11 4.8e-07 3.8e-05 23.5 1.7 1 23 1542 1565 1542 1565 0.97

11 11 1.4e-05 0.0011 18.9 3.4 1 23 1571 1593 1571 1593 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.75	59	4.0	0.1	1	23	73	96	73	96	0.93
2	11	1.1e-05	0.00087	19.2	0.7	1	23	102	129	102	130	0.93
3	11	6.4e-06	0.0005	19.9	2.6	1	23	136	158	136	158	0.95
4	11	3.9e-05	0.0031	17.4	5.0	1	23	164	186	164	186	0.99
5	11	0.00078	0.061	13.4	0.7	2	21	194	213	193	214	0.95
6	11	9.2e-09	7.2e-07	28.9	1.2	1	23	570	592	570	592	0.99
7	11	4.8e-07	3.8e-05	23.5	1.7	1	23	598	621	598	621	0.97
8	11	1.4e-05	0.0011	18.9	3.4	1	23	627	649	627	649	0.99
9	11	9.2e-09	7.2e-07	28.9	1.2	1	23	1514	1536	1514	1536	0.99
10	11	4.8e-07	3.8e-05	23.5	1.7	1	23	1542	1565	1542	1565	0.97
11	11	1.4e-05	0.0011	18.9	3.4	1	23	1571	1593	1571	1593	0.99

Sequence Information

Coding Sequence: atgtcgttATCGTATAATGCAAGAAATgAACAATCCATGAGTCCACTTGTCACGCCACTCCTGTGGCCCTCGCGCGGTTCTGGATCACCCTCTCAGCACAGTGGAACTGTCGACGAGGACAAGGAGGAcgaggaagaaggagaaacGAGATGTACTGTCTGCGACAAGCCattggATAGCCACCTGGTGACCTGTCATAGATACCCAGCGGAACAGCACCGCTGTGACAGTTGTCCCCGTGCTTACGCTTGGCGGCCACTTCTGGTACGACATCGTGCTATCGTTCACGGTGATCTTAGAAACTATCCCTGCGAAAATTGTCCAAAGTCGAACATCCGGCAGGTCTTCACGGACCCATCAAACCTACAACGCCATATCAGAACGCATCACGTGGGGGCGAGGAGCCACGCTTGCACGGAATGCGGCAAGACCTTCGCGACCAGTTCCGGCCTGAAACAGCACACCCACATTCACAGTAGCGTGAAACCCTTCCAGTGCGAGGTCTGTTTTAAGGCGTACACGCAGTTCTCCAATTTATGCCGGCACAAACGCATGCACGCCGACTGTCGCATGCAGATCAAGTGCGTTAAATGCGGACAATCCTTCAGCACGGTAACATCGTTATCGAAACATAAGCGATTTTGCGACTCCACGACTCCGACTGGTCCGCCTGGAACCATGCCTCAATTACCGACGCCAGCGACGAGCCCCTTTCTGGTGTATCCACGACCTCCCGTGAGCCTGCCAGGTGGCTTGCCTTTTTATCCGCCTAGTCTGATGGGTCCTTATCCAGGAATTTTCCCAAATGCTCCGAATTTTCTCAACACTCCTCTGCTTTTCCCGCCGAAAATCGAAGAGGTCGAGAAGAGGAGCGACAGTCCCAAGAAGGAACGTTTTACCCCTCCAAGAGTGTTGTCGCAACACAATAAGGTCTCTCCCTCCACGGCGGAGGAGGCCACTTCCACGTTTAGGCCATCTCCGGCTAGACCTCCTGTTCAACCGACGCCGGAAAGTGATGACGATCTTTCAAAGAGAAGAGAAGCTAGAAGCAACGAACGAAAAATGGAAACTGAAAGCACTTTGAAGGAGGAGGCGACCGAGCAACCGTTGGATCTAAGGGTTCAGACTAAGAAACAGGACGCTATTTCAAAAACCGCAAATAGGAAAAGCCGTACTCCGTCGCCAGCCCCAGTACCGATGGAGGAAACGCCCGCACCTCCCGATCGTCCGAAATCGGAAGAGGATGTTGCCGCTCCCCCGCCGATGGAACTCGAGTCTAAGGATGTCCAAGGAAGTAGCCCGCACTTGAGGACCAGTCTGTCAATTGAACAACCGCCGACCAATACACCACCTCACATGGCTTATCCCAGACCGATACACCCGTTGTTCCTCGAAACGATGTATCGCGGTCCAACGGGAACCTTCCCGGGATTTCCCAGCGCACCGCCACCTCCAGGAGGAGGTACTCCGGAATCTAGGCTGATACCTCCACTTCCACCCTTCGCTCCACCGCGCGGGCTTCCTTTTTTAGGCTCGCTTATGAACGGGCTCAGCGGCGCTAGGCCAGGAGCAGGATTCGATCTGCTTGCCCGGCCGCCGCTGAGCGCGTTCCCTGGGGTAAAGCCGTTCCAAGAGGCAGTAATGACGCCCcatcatcaccatcatcatcaccaTCACCATCACGTCCACGGCAAGATGAAGGATCGGTACTCCTGTAAATTTTGCGGCAAAGTGTTCCCTCGCTCTGCCAATTTAACGAGGCATCTGAGAACGCACACCGGCGAGCAGCCGTACAAGTGTAAGTACTGCGAGAGGTCCTTCAGCATCTCAAGCAACCTGCAGAGACACGTCAGGAATATCCACGACAAGCAGCGGCCGTTCAAGTGTCCGCTCTGCGAGAGGTGCTTCGGACAGCAGACCAACCTCGACAGACATCTGAAGAAGCACGAGGCTGACGACGGTAGCGGAGTGGTGTCGGTCGCCGATTCGCCTGGAAGCAGCAACGAAAACGAGCGAGAGGATACCTACTTCGACGAGATCAGATCCTTCATGGGCAAGGTCACTTACGGCGGTGAGAGCGGCTACGGGTTGCCGCATCACCCGGCCTATATTCCCAATCGTCTGCACGAGATAAACGAGTCCAAGATGGAGGTCGAGTatgacgaggacgaggacagCGAGGAAGGTGTGTCTCCGTTGGAGGAGACAGACGGACTGTCGCCGATCGAGGCCAAGGAATCCCCGTCGCCCTCGCAGTACGACCTGAAGCTGAGGGAGAAGCAGGAGCTGCTCAATAATAATACCGCGGAGCCGACCTCGGCATCGAAGGCTTCTGGGAACGTATCCTCTGCCGACACGCCGACCTGGTCCACGTATCTTCCAGGAAGAATCGCGAGGTTTCGAGAACGTTACGATGGCGATGGTGGTGGCAGTGATGGTGGTGTCGGTGGTGATGGCGCGCCAAGCAGGAGGCTCACGGAGAAAagggaggagaaggaagaagtGGTGAACGTCGAGAAACCGAGGCGTAATCTGAAGCGTAGATGCATCGATAGCAATCGGCGGCTATCCTACTCGACCGCCGCCGCTGATCTCCAAGGCACATTAGATCGCGGGGCGAGGCGAGAAGGGAGACGCCGTACCGTGGACGGTGCCACGCCGACGATGGTGCGCGCCCGCGCCACCGTTGAGGAGAGCTGTTGTGAGCCCGAAGGAGTTTCGAGCGAGAGAAGAGGAGCATCGAGCGGACCGGCTACGAGCGAGCAGGAGCGAGCAAGATCGAGTGAAAGTAACGCGCCGCTGGCCGGCCGGCTGGCCGGCCACGCGTCCTGCCCGCGCATAAGACGCACATTTGAGATGGAGGAGGAAGGCACCGCTCCTCGTGGGACATTGCGCTATGTTCGCGAGGATGGCAGGCGTGGGAATTCGCTGAtctatttattgatttatccCTCGGAGTCGACATCGTGCACATGGTGCTCTGTCAGATGCGACGGAAGCTGTAAGTCGATCTTCACCGAGATCCTATCGTCTTCTCTCCCACGCGACGCGGTTTCGTTAGCCGGCGCGACCAAGTCGCTTTTTCCACATAACGAACTCCTTGTAAGAGCGGCCGCGACAAGCGACGTCGCGGATCGAACATTCGAAAGCGAGGAGGACGCTATGGGAAACCCTGACAAAGAAAGATTCTCCGGCTTCGGCCACGACTTGACTCACATGCGCATGATCCTTCGACAAAGCCAAAGGATCGAGTTGTGTGCGAAGATAATCGGAACGCGGGGCGCTGATCgcaacgcgccgcgccgcgccgaacTCCATCGGCTCGGGATATGTCAAAGAACGGCGTTTACGAAACGCTCCTCCGTCGTTTACGACAGTCGCGATTTCGCGAGAGGTCGACCGCGAAGCGTCTCCGAGAATCGGTCGGAAAAAGCGGCTCAGAAGAGGCCCGTGGGGCACGCTGTACAAACTGAGGCTAACGACGAGTTCACGGATAATAATCCCGGGTCGTGTTATTCCACGACGATGAAATACGAAACTTGGGTGGCGGAGATATTCCGCGAAGTATTACTCTCGATAAACCCGAGGAGCAACAGCCGGGCGTGTTCGCCCGGTACGGGGCCCCGACCATTGCGCTTCCTCCGCGCGATGCGCCGCGATGGCCAGCTCTCTAAAGGGCCGCAATATCCATATCCGTTATCGTTGCGCACCGTAGTTCTCTCGCCCACtgaaaaaaatagaattacgGGGGACATCGAGGCGCGACTCAATGCGCGGCTTTGTGGTTCAACGAGAACGCGTTTAGCTGCACAACGGATGCGATCGGATTTAGCCGATTATCCGCGGCAAGCCGGTTACAGCGTTGCGCCCACGGGAAGTAAATTGGCACGAAAATTACAACGAGCTGACGAGGATTCGAACAGGATTCGAGCATCGACAATAAAGACGAGTTTGCGGCCGTCGAGATGCCCCATAGTCGATGAAAGTCGAGAAGGCGTTACGATATCTCTATTAGCACATCGAGATTTAAGCAGTGTGATGAGCGGATACCTCGGTAGCATCACCCTGCCCCCGACGTTGCTGCACGACCCGAAGTACCCTCCAGCCATGCGGGAGAAAGACTCGAGTCCGAGAAAGATGCCGGGCCACATAAGCCCAAAGCAAGCTAGCATTTATCCTCTGAGCGTCCGCGTGCCGGACGTAGAGGAGCTGCCATACGATCTCAGCCACGGTCACGGCCGCGGCATGTCGAGCCCGACGAatcagcaacagcagcagccgcACATGAGTCCCGCGGCCCGACCGCCCCAGCCGCATAATCAGGACGAGCTCGACTGCGAGCCGCTTGATCTTCGTGTCGATCACAAGAAGGAGCGGCTCAGGGATGAGAATCAGAACGAGATCGAGGTGCTGAATCAGAACAGCCTGGGCGGTGGTAGTCTGCCCTACCACACGGTGCTCTTTCCACAGCATCACGCGATGCACCCGCTCGTTCTGGAAGCAATGTACAGGTCACATCATCACAGCTCGCCAGACAGATACTCCTGCAAATTCTGCGGTAAGGTCTTCCCTAGATCGGCGAACCTGACGAGACACCTGAGGACGCATACCGGCGAGCAACCGTATAAGTGCAAATACTGCGAGAGGAGCTTCAGCATCTCCAGCAACCTTCAGCGTCACGTCAGAAACATCCACAACAAGGAAAAGCCGTTTAAGTGTCCGCTTTGCGAGAGATGCTTCGGCCAACAAACCAATCTGGATCGTCATCTGAAGAAGCACGACGCGGATGGGCCGACGATACTGGATGAGGTCAGATCGAGGTATCACGGTCAACTTCCGCGAGCCGACGATTCCTACTTCGAGGAGATCCGCAGCTTCATGGGAAAGATCACCTCGCAACGACAGAGCATACCGTACTTCCCTGGTCTACTAGGTCACGCAACTGATGACTTCAGAAACGACAAGCAGCAACTGCAGCTGGAGGAAAAGCGAGGCGACTCGTCGTACTTCAGCGACCGGGACAATCTCAGTTCGAGGTCGAGCAGTACGGCCAGCAGGCCGGAGAGCGTCCAGGAGGAACAAAGGGAAGTGAACTCGCCGCCACTCTCTCCCGGCAATAATACCTGA
Protein Sequence: MSLSYNARNEQSMSPLVTPLLWPSRGSGSPSQHSGTVDEDKEDEEEGETRCTVCDKPLDSHLVTCHRYPAEQHRCDSCPRAYAWRPLLVRHRAIVHGDLRNYPCENCPKSNIRQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTTPTGPPGTMPQLPTPATSPFLVYPRPPVSLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLLFPPKIEEVEKRSDSPKKERFTPPRVLSQHNKVSPSTAEEATSTFRPSPARPPVQPTPESDDDLSKRREARSNERKMETESTLKEEATEQPLDLRVQTKKQDAISKTANRKSRTPSPAPVPMEETPAPPDRPKSEEDVAAPPPMELESKDVQGSSPHLRTSLSIEQPPTNTPPHMAYPRPIHPLFLETMYRGPTGTFPGFPSAPPPPGGGTPESRLIPPLPPFAPPRGLPFLGSLMNGLSGARPGAGFDLLARPPLSAFPGVKPFQEAVMTPHHHHHHHHHHHVHGKMKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDTYFDEIRSFMGKVTYGGESGYGLPHHPAYIPNRLHEINESKMEVEYDEDEDSEEGVSPLEETDGLSPIEAKESPSPSQYDLKLREKQELLNNNTAEPTSASKASGNVSSADTPTWSTYLPGRIARFRERYDGDGGGSDGGVGGDGAPSRRLTEKREEKEEVVNVEKPRRNLKRRCIDSNRRLSYSTAAADLQGTLDRGARREGRRRTVDGATPTMVRARATVEESCCEPEGVSSERRGASSGPATSEQERARSSESNAPLAGRLAGHASCPRIRRTFEMEEEGTAPRGTLRYVREDGRRGNSLIYLLIYPSESTSCTWCSVRCDGSCKSIFTEILSSSLPRDAVSLAGATKSLFPHNELLVRAAATSDVADRTFESEEDAMGNPDKERFSGFGHDLTHMRMILRQSQRIELCAKIIGTRGADRNAPRRAELHRLGICQRTAFTKRSSVVYDSRDFARGRPRSVSENRSEKAAQKRPVGHAVQTEANDEFTDNNPGSCYSTTMKYETWVAEIFREVLLSINPRSNSRACSPGTGPRPLRFLRAMRRDGQLSKGPQYPYPLSLRTVVLSPTEKNRITGDIEARLNARLCGSTRTRLAAQRMRSDLADYPRQAGYSVAPTGSKLARKLQRADEDSNRIRASTIKTSLRPSRCPIVDESREGVTISLLAHRDLSSVMSGYLGSITLPPTLLHDPKYPPAMREKDSSPRKMPGHISPKQASIYPLSVRVPDVEELPYDLSHGHGRGMSSPTNQQQQQPHMSPAARPPQPHNQDELDCEPLDLRVDHKKERLRDENQNEIEVLNQNSLGGGSLPYHTVLFPQHHAMHPLVLEAMYRSHHHSSPDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILDEVRSRYHGQLPRADDSYFEEIRSFMGKITSQRQSIPYFPGLLGHATDDFRNDKQQLQLEEKRGDSSYFSDRDNLSSRSSSTASRPESVQEEQREVNSPPLSPGNNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -