Tlon010974.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- -
- Assembly
- GCA_004794745.1
- Location
- QBLH01002056.1:89114-98474[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.19 1e+02 2.5 1.2 32 41 6 15 3 18 0.86 2 9 2.9e-07 0.00016 21.1 0.3 1 43 34 77 34 78 0.94 3 9 4.4e-05 0.025 14.1 1.8 5 41 94 128 90 130 0.93 4 9 1.7e-08 9.3e-06 25.1 0.8 1 41 149 190 149 191 0.95 5 9 7.7e-10 4.3e-07 29.4 0.7 3 41 206 242 204 244 0.93 6 9 2.5e-06 0.0014 18.1 1.1 1 41 283 324 283 325 0.90 7 9 3.2e-09 1.8e-06 27.4 0.2 3 41 340 376 338 388 0.96 8 9 1e-05 0.0058 16.2 2.9 1 40 397 437 397 439 0.84 9 9 2.4e-05 0.013 15.0 0.2 3 26 454 475 452 480 0.89
Sequence Information
- Coding Sequence
- ATGGTTTCAACTTGTACTGGAAATTTACGACAACATCTAAGAAGACATTCCACAAGAAGTCGGAATAAGACAATTATAATGGCACCGAGAAGAAGACACAGCAAGttgtggaattatttcgaggaaTTAAAACCTTTACTGGTAAAGTGCACCacctgtaaaaaagaaattcagatACCTCATCGATCAAGGCTTGTGTCAATATTTAGAGCACACTTATCAATTAAacatggaatatttattaataatgacacTTTCACACTACCTGACGACTTGAGACAATATTACTCGGAGTTATCGGGATGTaaagcaaaatgtaaaaattgtgaCAGAACATTGTCTTTCTTATCAAGTATGGAACatttacgaaaacatttaagaagacATTCCACAAAAATCCAGAGTCGAGATGAGACGGTTATAATGACACCGACAAGAAAACGTAGCAAgttttggaattatttcgaaaaattgaaacCATTGCTAGTAAAGTGCACGACctgtaaaagagaaattaaggTATCTAGCCCAGGAAACTACACAAACGTAATGAGAAGGCACTTAAGTAGACatggaatatttctcgataatggCACTCTCTCACTACCTGAcgatttaaaacaatattactcGAAGTTACCGGAATATAAGgcaaaatgcaataattgCGGCAAAACATTATCCTTCTTaacaaattttagaaatttacgaacacatttaagaaaacattccACAAGTATCCAGAGTACAGATGAAGAAAATCTACAAACGCTTGTTGATGCAATCGCTGTACCACATTTAGTGTCAGACAATCTGTATTACGGGACGACACCGACAAAAAAACGCAGCAAgttttggaattatttcgaggaaTTGAAACCTTTGCTAGTAAAGTGCACGACctgtaaaagagaaattaaggTATCTCACCCAACAAAATACACAAGAGTAATGAGAATGCACTTAAGTAGACatggaatatttctcgataatgaCATTCTCTCACTACCTAACgacttaaaacaatattactcGGAGTTACCGAgatataaggcaaaatgtaataattgtggCAAAGCAGTGTCTTtcttaacaaatattgaaaatttacgaGTACATTTAAGAAGACATTACACAAGAATCCTGAGTCGAGATGAGACGGTTATAATGGCACTGAAAAGAAAACGCAGCAAgttttggaattatttcaaaaaattgaaacctTTACTAGTAAAGTGCACGAcctgtaaaagaaaaattaaggtATCTCACCAAACAcgctacataaaattaatgagagTGCACTTAAGTAGACatggaatatttctcgataatgaCACTTACACACTACCTGACgacttaaaacaatattactcGGAGTTACCGAgatataaggcaaaatgtaataattgtggCAAANAATTGTGGCAAAGCAGTGTCTTtcttaacaaatattga
- Protein Sequence
- MVSTCTGNLRQHLRRHSTRSRNKTIIMAPRRRHSKLWNYFEELKPLLVKCTTCKKEIQIPHRSRLVSIFRAHLSIKHGIFINNDTFTLPDDLRQYYSELSGCKAKCKNCDRTLSFLSSMEHLRKHLRRHSTKIQSRDETVIMTPTRKRSKFWNYFEKLKPLLVKCTTCKREIKVSSPGNYTNVMRRHLSRHGIFLDNGTLSLPDDLKQYYSKLPEYKAKCNNCGKTLSFLTNFRNLRTHLRKHSTSIQSTDEENLQTLVDAIAVPHLVSDNLYYGTTPTKKRSKFWNYFEELKPLLVKCTTCKREIKVSHPTKYTRVMRMHLSRHGIFLDNDILSLPNDLKQYYSELPRYKAKCNNCGKAVSFLTNIENLRVHLRRHYTRILSRDETVIMALKRKRSKFWNYFKKLKPLLVKCTTCKRKIKVSHQTRYIKLMRVHLSRHGIFLDNDTYTLPDDLKQYYSELPRYKAKCNNCGKXLWQSSVFLNKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -