Tlon012724.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- -
- Assembly
- GCA_004794745.1
- Location
- QBLH01001430.1:1-11385[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6.7e-07 0.00037 20.0 1.2 1 43 44 87 44 88 0.93 2 14 3e-08 1.7e-05 24.3 0.2 3 41 102 138 100 140 0.94 3 14 3.2e-06 0.0018 17.8 1.9 2 34 160 190 159 202 0.82 4 14 0.00018 0.1 12.2 0.5 9 41 223 253 219 255 0.89 5 14 4e-07 0.00022 20.7 0.7 2 41 272 312 271 313 0.96 6 14 5.9e-06 0.0033 16.9 0.9 9 41 334 364 330 366 0.89 7 14 3.7e-07 0.0002 20.8 2.5 2 43 383 425 382 426 0.87 8 14 5e-05 0.028 14.0 0.0 5 41 442 476 438 478 0.94 9 14 5.7e-07 0.00032 20.2 1.6 1 41 494 535 494 536 0.97 10 14 9.7e-05 0.055 13.0 2.3 9 41 557 587 553 589 0.90 11 14 6.4e-07 0.00036 20.0 3.7 1 41 608 649 608 651 0.94 12 14 2.1e-09 1.2e-06 28.0 0.4 3 43 665 703 663 704 0.96 13 14 3.1e-08 1.7e-05 24.2 0.6 1 43 720 763 720 764 0.95 14 14 2.3e-08 1.3e-05 24.7 0.2 5 41 780 814 776 816 0.94
Sequence Information
- Coding Sequence
- atGCCTTCTTTTATCCATTGtgacaaattttacaaacgcTTATTGTTGTGGCGATCACTGTATCACATTCATTATCAGACGATTAATCTGTATTACAGGACTGTTATATTGGCACTGACAAGAAAACGTAGCAAGttgtggaattatttcgagaagTTGAATCATTCGCTGGTAAAGTGCACGACctgtaaagaagaaattaagacACCTAATCCAACAAGACgcacaaaaataatgaaagcacacatattaaatgtacatGGAATATCTCTTGATGATGAGACTGTCACACTACCTGACgacttaaaacaatattactcGGAGTTAACGggatataaggcaaaatgtaataattgtggCAAAGCAGTGTCTTtcttaacaaatattgaaaatttacgaGTACATTTAAGAAGACATTCAATCCTTCCAACAAGAATCCAGAGTCGAAATGAGACAACACCGACAAAAAAACGCAACAAGttgtggaattatttcgaggaaTTGAATCCTTCGCTGGTAAAGTGCACgacctgtaaaaaagaaattaaggtaTCTCATCCAACAAACTGCACAAGAATATTTAGAGTACACTTATTAAATGTACACGgaatatttcttgataatgACATTTATACACTACCTGACGACTTAAGGCAATGTTACTCAGAAATACCGggatataaggcaaaatgtaataattgcggCGAAACAGTGTCCTTCTTAAAAGATGTTGGATCTTTACGAAgacatttaagaaaacattccACAAGAAGCCAGAGTCAAGATGAGACGACACCGACAAAAAAACGCAACAAGttgtggaattatttcgaggaaTTGAATCCTTTGCTGGTAAAGTGCACgacctgtaaaaaagaaatcaagatATCTCGTCCATCAAACCGTATAACAATATTCAGAGTACATTTAAAGAGACatggaatatttctcgataatgaCATTCGTACACTACCTGACGACTTAAGGCAATGTTACTCAGAATTACCGggatataaggcaaaatgtaataattgcggCAAAACATTGTCCTTCTTAACAGATATTGGATCTTTACGAAgacatttaagaaaacattccACAAGAATCCAGAGTCAAGATGAAACAACACCGACAAAAAAACGCAACAAGttgtggaattatttcgaggaaTTGAATCCTTCGCTGGTAAAGTGCACGACCtgtaagaaagaaattaaggtATCTCATCCAACAAACTGCACAAGAATATTTAGAGCacacttatttaaaaaacatggaATATCTCTTGATAATGACATTCGTACACTACCTGACGACTTAAGGCAATATTACTCGGAGTTACCGggatataaggcaaaatgtaataattgcgaCGTAACATTGTCCTTCTTAAGAGATGTTGGATCTTTACGAAATCATTTAAGAAGACATTCCACAAGAATCCAGAGTCAAGATAAGACGAAACCGACAAAAAAACGCAGCAAGTTAtggaattatttcgaggaaTTGAATCCTTCGCTGGTAAAGTGCACGACCTGTAAAAAAGAAGTTAAGATATCTTGTCCATCAAACCATACACCAATATTTAGAGCACATTTAAAGAGACAtggaatatttatcgataatgaCACTGTCACACTACCTGACGACTTAAGGCAATGTTACTCGAAATTACCGggatataaggcaaaatgtaataattgcggCGAAACAATATCCTTCTTAAAAACTGTTGGACATTTACGAACACATTTAAGAAGGCATTCCACAATAACCCAGAGTCGAGATAAGACAGTTATAACGGCACCGAGAAGAAAATACAGCAAGTTGTggaattatttcaaagaattgaaTTCTTCGCTGATAAAGTGCACgacctgtaaaaaaaagattaaggtATCTCACCCAGAAAACTGCATAACAATAATGAGAGTACACTTAAGTAGACATGGAATATTTATCCATAATGACACTCACACACTATCTGACGacttaaaacattattactcGGAGTTACCGAaatataaggcaaaatgtaataattgtggCGAAGCAGTGTCTTTTTTAACAAGTATGAGAAATTTACGAGAACATTTAAGAAGAAGACATTTCACAACAATACAGAGTCGTTATAAGACGGCACAGACAAAAAAACGCAGCAAgttttggaattatttcgaggaaTTAAAACCTTCGCTGGTAAAGTGCACaacctgtaaaaaaaaaattaagatacctTATCCAAAAAGCCGTACAACAATATTCAGAGCACACTTATTAAATGTACATAGAATTTCTCTTGATAATAAGATTTGTACACTACCTGACGACTTAAGGCAATATTACTCGGAGTTATCGGGATATaaagcaaaatgtaataattgtggCAAAGTAGTGTCTTTCTtcacaaatattgaaaatttacgaGATCATTTAAGAAGACATTCCACAAGAATCCAGAGTCGAAATGAACCAAGCACTTCAAGTTTAGCGGATGATAATGTGGGTCCTTCTGCACGCTGTCAAAGTCAAGATGATACATCTGGTTTGCGCGTTCAgtcatttattaaagaaaggaCCGAAAAAACAGGCGCACttaatgaACCAGGCACTTTAATTTCAACGGATTATAACACGAATTCTACCGCAGAATGTGAAAGTCAGGAAACAGTTGATTTGGATCCTCAAACATGTGAACAATCGAGAAAGGATACAAGGGCATGTGATGGGTAA
- Protein Sequence
- MPSFIHCDKFYKRLLLWRSLYHIHYQTINLYYRTVILALTRKRSKLWNYFEKLNHSLVKCTTCKEEIKTPNPTRRTKIMKAHILNVHGISLDDETVTLPDDLKQYYSELTGYKAKCNNCGKAVSFLTNIENLRVHLRRHSILPTRIQSRNETTPTKKRNKLWNYFEELNPSLVKCTTCKKEIKVSHPTNCTRIFRVHLLNVHGIFLDNDIYTLPDDLRQCYSEIPGYKAKCNNCGETVSFLKDVGSLRRHLRKHSTRSQSQDETTPTKKRNKLWNYFEELNPLLVKCTTCKKEIKISRPSNRITIFRVHLKRHGIFLDNDIRTLPDDLRQCYSELPGYKAKCNNCGKTLSFLTDIGSLRRHLRKHSTRIQSQDETTPTKKRNKLWNYFEELNPSLVKCTTCKKEIKVSHPTNCTRIFRAHLFKKHGISLDNDIRTLPDDLRQYYSELPGYKAKCNNCDVTLSFLRDVGSLRNHLRRHSTRIQSQDKTKPTKKRSKLWNYFEELNPSLVKCTTCKKEVKISCPSNHTPIFRAHLKRHGIFIDNDTVTLPDDLRQCYSKLPGYKAKCNNCGETISFLKTVGHLRTHLRRHSTITQSRDKTVITAPRRKYSKLWNYFKELNSSLIKCTTCKKKIKVSHPENCITIMRVHLSRHGIFIHNDTHTLSDDLKHYYSELPKYKAKCNNCGEAVSFLTSMRNLREHLRRRHFTTIQSRYKTAQTKKRSKFWNYFEELKPSLVKCTTCKKKIKIPYPKSRTTIFRAHLLNVHRISLDNKICTLPDDLRQYYSELSGYKAKCNNCGKVVSFFTNIENLRDHLRRHSTRIQSRNEPSTSSLADDNVGPSARCQSQDDTSGLRVQSFIKERTEKTGALNEPGTLISTDYNTNSTAECESQETVDLDPQTCEQSRKDTRACDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -