Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: -
Assembly: GCA_004794745.1
Location: QBLH01002544.1:534745-582236[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.5e-07 0.0002 20.9 2.3 1 40 8 48 8 50 0.93

2 16 4e-09 2.2e-06 27.1 0.5 3 41 65 101 63 103 0.95

3 16 3.2e-05 0.018 14.6 0.6 2 39 305 343 304 353 0.91

4 16 8.8e-05 0.049 13.2 0.2 2 27 364 387 363 391 0.94

5 16 8.1e-10 4.5e-07 29.3 1.0 1 43 491 534 491 535 0.97

6 16 0.0023 1.3 8.7 0.1 5 27 551 571 548 575 0.93

7 16 1.4e-05 0.0076 15.8 0.3 1 43 584 627 584 628 0.93

8 16 4.9e-05 0.027 14.0 0.0 3 36 642 673 640 674 0.91

9 16 6.1e-08 3.4e-05 23.3 0.5 1 42 713 754 713 755 0.96

10 16 2.6e-06 0.0015 18.1 0.8 2 43 766 808 765 809 0.90

11 16 0.00036 0.2 11.2 0.1 3 25 823 843 821 844 0.92

12 16 5.7e-07 0.00032 20.2 0.8 1 44 879 924 879 924 0.93

13 16 3e-09 1.7e-06 27.5 0.8 3 41 938 974 936 976 0.93

14 16 0.15 84 2.9 0.0 1 11 1037 1047 1037 1056 0.84

15 16 1.4e-07 7.7e-05 22.2 2.4 1 40 1062 1102 1062 1104 0.94

16 16 3.6e-09 2e-06 27.3 0.2 3 44 1119 1158 1117 1158 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.5e-07	0.0002	20.9	2.3	1	40	8	48	8	50	0.93
2	16	4e-09	2.2e-06	27.1	0.5	3	41	65	101	63	103	0.95
3	16	3.2e-05	0.018	14.6	0.6	2	39	305	343	304	353	0.91
4	16	8.8e-05	0.049	13.2	0.2	2	27	364	387	363	391	0.94
5	16	8.1e-10	4.5e-07	29.3	1.0	1	43	491	534	491	535	0.97
6	16	0.0023	1.3	8.7	0.1	5	27	551	571	548	575	0.93
7	16	1.4e-05	0.0076	15.8	0.3	1	43	584	627	584	628	0.93
8	16	4.9e-05	0.027	14.0	0.0	3	36	642	673	640	674	0.91
9	16	6.1e-08	3.4e-05	23.3	0.5	1	42	713	754	713	755	0.96
10	16	2.6e-06	0.0015	18.1	0.8	2	43	766	808	765	809	0.90
11	16	0.00036	0.2	11.2	0.1	3	25	823	843	821	844	0.92
12	16	5.7e-07	0.00032	20.2	0.8	1	44	879	924	879	924	0.93
13	16	3e-09	1.7e-06	27.5	0.8	3	41	938	974	936	976	0.93
14	16	0.15	84	2.9	0.0	1	11	1037	1047	1037	1056	0.84
15	16	1.4e-07	7.7e-05	22.2	2.4	1	40	1062	1102	1062	1104	0.94
16	16	3.6e-09	2e-06	27.3	0.2	3	44	1119	1158	1117	1158	0.95

Sequence Information

Coding Sequence: ATGGTACCGAGAAAAAAACGCAGCAAGttgtggaattatttcgaggaaTTGAAACCTACGCTGGTAAAGTGCACgacctgtaaaaaagaaattaaggtaTTTCACCCAAAACACTCCACAAAATTAATGAGGCTGCACTTAAGTAAACatggaatatttctcgataacgACACTTTCTCACTACATGAcgatttaaaacaatattactcGGAGTTATCGggatataaggcaaaatgtaatgaTTGTGGCAAAACAATGTCtttcttaacaaatattacacgtttacgaaaacatttaagaagacATTCCACAAGAATCCTGAGTCGAGATGAACCAAGCAGTTCAAGTTTAGCGGATAATAGTATAGATTCTTCTGCAGACCGTCAAAGTCAAGATGCATCTGATTTGCCCATACAAGCACTTAAAGAAGCGATAGAAAAAACAGGCGCACttaatgaACCAAGCACCTTCAGTTCAACGGCTTATATTATGGATCTTTCTACGGGAAAATATATTCCTCTGCATCAAAATCAAGAACAAGTACCATCTAGTTTACCCGTTCAATCATTTAAAGAAACGGCAGAAAATACAGGAGTACTTGATGAACCGAGCACTTCAAGTTCAGCGGATTATGTTATGGATCCTTCTGCAGAACATCAAAGTGGAGAACCATGTGGTTTTCCCGTTCAATCATTTGAACAAATGACAGAAGGAACAAGCGCACTTCATTCAGATTGGTTCTATTATACAATACCAAGCGATTCAAGTTCAACGTATTACGTTATGGCTCCTTCTGCAGAACATCAAAGTGGAGAACAACCTGGTTTGCCCGTTCAATCATTTGAACAAATGACAGAAGGAACAAGCGCACTTCATTCGACGGATATAATGGCTCCAACAAGAAAACGTAGCATGttgtggaattatttcgagaagTTGAATTATTCGCTAGTAAAGTGCACGACCtgtcaaaaagaaattaagacaCCTAATCCAACAAGACgcacaaaaataatgagagcacacatattaaatACGATTAATCTGTATTACAGGACGATTACACCGGCACCGGCAAGAAGACGTAACAAGTTATGGAATTATTTTGAGGAATTGAATCCTTCGCTGGTAAAGTGCACgacctgtaaaaaagaaattaagatacCTGAACGAAGGaagtttatgttaatattcaGAGTACACTTAAACAGTTACGATATCGAGAAAAAAACGCAGGAAGTTatggaaatatttcgaaaaattgaaacCTTCGTTGATAAAGTGCGTAATTtACCAAGCACTTCAAGTTTAGCGGACAATAGTATAGATCCTTCTGCAGACCGTCAAAGGCGAGGTCAAACCCAAGAATCACTTAGTTTGCCCGCTCAATCGGCTCAATCATTTGAACAAATGAGAAAAGGAACAAGCGCacttaataaGACAATTAAAAAGGCATCGATAAAAAGACGCAGCAAGTTGTGGAATTATTTCAAGGAATTAAAACCTTTGCTGGTAAAGTGCACCatctgtaaaaaagaaattaagatatcTCGTCTATCAAACCGTATAAAAACATTCAGAGcacatttatcaattaaacatggaatatttctttataatgaCACTTTCACACTACCTGACGACTTGAGCCAATATTACTTGGAGTTATCGAgatataaggcaaaatgtaaaGATTGTGACAAAACATTGTCTTTCTTATCAGAACAGTTGGtacgaagaaaaaaacgtAGCAAgttttggaattatttcgaggaaTTGAAACCTTTGCTGGAAAAGTGCACGacttgtaaaaaagaaattaagatacCTCATCCAACAAGACgcacaaaaataatgagagcacacatattaaatgtacatGGAATATCTATTGATGATGAGACTGTCACACTACCTGACgacttaaaacaatattactcGGAGTTACCGGGAcataaggcaaaatgtaataattgtggCAAAGCAGTGTCTTtcttaacaaatattgaaaatttacgaGACAATTATAAGGGCATCGAGAAGAAAACGCAGCAAGttgtggaattatttcgaggaaTTAAAACCTTCGCTGGTAAAGTGCACCacctGACGGTTATGGTACCGAGAAAAAAACGCAGCAAGttgtggaattatttcgaaaaattgaaacCTACGCTGGTGAAGTGCGCGACCtgtacaaaagaaattaagatatctcgtttaaaggaaataaaaataatgagaatacACTTAAGTAGACAGACGATTATAACGGCACCGGCAAGAAAACGTAACAAGTTATGGAATTATTTTGAGGAATTGAATCCTTCGCTGGTAAAGTGCACgacctgtaaaaaagaaattaagatatcTCATCCAAAAAaccgtataataatattgagaacacatttatttaatgaacatGGAATATACCTCGATGATGACATTCGTAAACTACCTGACGACTTAAAGCAATATTATTCGAAGTTACCGggatataaggcaaaatgtaataattgcggCAAAACAAAAGGTCAAATTCTACGAACGCTTGTTGAGGCAATCACTGTACCACATTTAATATCagacaatatatattacaggACGGTTATAATGGCACAGAAAAGAAAACGCAGCAAGttgtggaattatttcgaggaaGTAAATCCTTCTCTGGTAAAGTGCACgacctgtaaaaaagaaattaagatacCTTATCCAAACAACAGCCGTACAATAATATTCAGAAAACACTTATtcaataaacataaaatatacctCGATGATGACATTTTCTCACTACCTGACGacttaaaagaatattactcGAAGTTACCGAGATATAAGgcaaaatgcaataattgCGGCAAAACATTATCCttcttatcaaattttaaaaatttacgaagaCATGTAAAAAGACATTCCACAAGTATCCAGAGTCCAGATGAACCAAACACTTCAATTACAACGGGTTTTGATACGAATCCTACTGCAGAATGTCAAAGCCAAGAATCACCTGGTTTGCCCGTTCAATCATTTGAACaaacgagaaaagaaacaaGCACACTTGATAAGACGATTATAAAGCCACCGACAAGAAAACGTAGCAAGTTAtggaattatttcgaggaaCTGAAACCTTCGTTGGTAAAaACAGTTATGGtaccgaaaaaaaaacgcagcaagttgtggaattatttcgaggaaTTGAAACCTACGCTGGTAAAGTGCACgacctgtaaaaaagaaattaagatatttcacCCAAAACACTCCACAAAATTAATGAGGCTGCACTTAAGTAAACatggaatatttctcgataacgACACTTTCTCACTACAAGAcgatttaaaacaatattactcGGAGTTATCGggatataaggcaaaatgtaatgaTTGTGGCAAAACATATTCCTTTATAAGAAATCCGACATATTTACGAGAACATTTAAAAAGGAGACATTCCACAAAAATCCAGAGTCAAGATGAACCAAGCACTTCAAGTTTACCGAATACTATGGATCCTTCTGCAGAACGTCAAGGTCAAGATATATCTGATTTGCCTGTTCaatcatttaaagaaaaagcagGCGCACttaatGATGGTTCCAATAACATCGAGAAAAAAACGCAGAAAgttttggaattatttcgaggaaCTGAAACCTTCGTTGGTAAAGTGCAAAAAACCAAACACTTCAAGTTCAACggcttatattataaatcctTCTacaggaaaatatatattcctcTACGCCAAAGTCAAAAACAAGTACCATCTGGTTTGCCCGttcaatcatttaaaaaaacggcaaaaaatatagaagtacttgatgag
Protein Sequence: MVPRKKRSKLWNYFEELKPTLVKCTTCKKEIKVFHPKHSTKLMRLHLSKHGIFLDNDTFSLHDDLKQYYSELSGYKAKCNDCGKTMSFLTNITRLRKHLRRHSTRILSRDEPSSSSLADNSIDSSADRQSQDASDLPIQALKEAIEKTGALNEPSTFSSTAYIMDLSTGKYIPLHQNQEQVPSSLPVQSFKETAENTGVLDEPSTSSSADYVMDPSAEHQSGEPCGFPVQSFEQMTEGTSALHSDWFYYTIPSDSSSTYYVMAPSAEHQSGEQPGLPVQSFEQMTEGTSALHSTDIMAPTRKRSMLWNYFEKLNYSLVKCTTCQKEIKTPNPTRRTKIMRAHILNTINLYYRTITPAPARRRNKLWNYFEELNPSLVKCTTCKKEIKIPERRKFMLIFRVHLNSYDIEKKTQEVMEIFRKIETFVDKVRNLPSTSSLADNSIDPSADRQRRGQTQESLSLPAQSAQSFEQMRKGTSALNKTIKKASIKRRSKLWNYFKELKPLLVKCTICKKEIKISRLSNRIKTFRAHLSIKHGIFLYNDTFTLPDDLSQYYLELSRYKAKCKDCDKTLSFLSEQLVRRKKRSKFWNYFEELKPLLEKCTTCKKEIKIPHPTRRTKIMRAHILNVHGISIDDETVTLPDDLKQYYSELPGHKAKCNNCGKAVSFLTNIENLRDNYKGIEKKTQQVVELFRGIKTFAGKVHHLTVMVPRKKRSKLWNYFEKLKPTLVKCATCTKEIKISRLKEIKIMRIHLSRQTIITAPARKRNKLWNYFEELNPSLVKCTTCKKEIKISHPKNRIIILRTHLFNEHGIYLDDDIRKLPDDLKQYYSKLPGYKAKCNNCGKTKGQILRTLVEAITVPHLISDNIYYRTVIMAQKRKRSKLWNYFEEVNPSLVKCTTCKKEIKIPYPNNSRTIIFRKHLFNKHKIYLDDDIFSLPDDLKEYYSKLPRYKAKCNNCGKTLSFLSNFKNLRRHVKRHSTSIQSPDEPNTSITTGFDTNPTAECQSQESPGLPVQSFEQTRKETSTLDKTIIKPPTRKRSKLWNYFEELKPSLVKTVMVPKKKRSKLWNYFEELKPTLVKCTTCKKEIKIFHPKHSTKLMRLHLSKHGIFLDNDTFSLQDDLKQYYSELSGYKAKCNDCGKTYSFIRNPTYLREHLKRRHSTKIQSQDEPSTSSLPNTMDPSAERQGQDISDLPVQSFKEKAGALNDGSNNIEKKTQKVLELFRGTETFVGKVQKTKHFKFNGLYYKSFYRKIYIPLRQSQKQVPSGLPVQSFKKTAKNIEVLDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -