Tlon010327.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax longispinosus
Gene Symbol
clz9
Assembly
GCA_004794745.1
Location
QBLH01002298.1:1-3329[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-07 0.00025 20.2 0.0 3 33 43 72 41 79 0.92

Sequence Information

Coding Sequence
ATGGCtaggaagaaaattaatgagaaaactGTAAAAGAGACTgctaagaagaagaagaagagtgCAAGTGGTCAGTATCGTAGAGCTGTagctaaaaaaaagagaagtgaaaaaaattacagtgTTGAAACTCTTCAAGCTGCTCTCAATGCAACGGGCGAAGGGCTGACTCTCCGCCAAGTTGCTCACAGTTTTGGAGTACCAAAGagtactcttttttttaaattaaagtataacTCACCACTTGAGTGTAGGAAGGGACCAAAAACTGTCTTGAGTgcggaagaagaaaatgaaattgcaAGTTGGATAGTGTTCTGTGCAGATAGTGGTTTTCctgtaaataaaacaagacTCCTTGACTgcgtacaaaaatatttcaataataacaaaGCTAAGACTCCTTTCAAGAACAATCGTCCTGGGCAACACTGGTATCGAGCTTTTATGAACAGACATCCAAATCTGAGTACCAGAATAGCACAAAATCTGACTTCTACCAGAGCAGCCGTCACTGAAGTAGACCTTCGAAACTGGTTTGCAAAAGTCAAACAATACCTTGACACAAAAAACTTGCTGCATATAGAACCACACCGAGTATTCAACTTGGACGAGTCTGCGTTTATGCTTGTTCCTAAGGACAACAAAGTGATAACAGAGAAAGGTGTTAAGGCTCCATATCAAATAGTGTCCGGTAACGAGAAAGCcagtttaacaatattatttactgtTGCTGCTTCTGGAGTAATGCCACCTCCCATGATTTTATTTGATCTGAAAACGTCGCCAAAGAAGAATGTTTTGGACCAAATACCAAGAGGCTGGGGAGTAGAAAACACGGAACGTGGCTGGATGACAGGTGAAAGCTTTTACAGTTATATAAgtaatgtattttacaaatggCTACAAGAGAACAATTACGTGTTTCCTATCATCTTATATGTAGACGGACATAGCTTACATATGACGCTACCACTACTTAAGTTCTGCAAAGAGCATCTTATAGAACTAGTAGTGCTCTATCCAAATGCCACACACATCATACAACCATTAGATGTTGCTGTCTTCCATCCACTGAAGGATTCTTATAGAAAAGTGTTACGTCAATGGAGAATCGACAATAATGTTGTTGATGTTAAGAAACATATGTTTGCTCCAGTTTTAAAAATGGCCTTGGAATCGTATGATCTCACTGACGCTGTTAAAAATGGTTTTAGAGCCTGTGGCTTATATCCATTCAACGCTGATGCAGTTAACTATAATGTTTTAAGCAAGAAGAGTAAGAAGAAAGACGCAAGCATTAATCTACATTCAACCAACAATTCAGATCAAGACAGTATCATAAAGAATACAGAACTTTTAGctatgtttgaaaaaaatgttatttctccGGATATCGTAGAGTCTTTCAAACAAGCTGAATCAGAAAACAAATGGAATGGTGATGTAAAATATGTGGCATTATATGAATCTTGGCTTAAGCTGAAAAAACTATGTAAAATGCATGATGTACCTTCAAATGAAGCTCTAACAGTTGAAAATTCATTACCAGCTGATCAACCAATACCAAATGCTGATTTGATTGATATGGCAACTAATACCGCATCCGGAGCAACTGATGAAATCATGCTTGATGTTTCAAGTCATTCCGACAACCAGCTGGACTTGTCTGTTATCAACGTAGCGGATGAAAACTCATTGGACATGAGTTATGCTATAACTCCAAGCATCGAACAAAATACTCTAGCAGAATTGCCAGTAGCAGAGTTAATTGAGTTGTACGATGAACTGGGCAATCGTGTAACAGCCACAGTTATAGCAATAAATGATGATGTGACTATGAGCAGCGACAGCTCCCCAAGTAGCGCAGATACCAGAGTTGACAGTCAACTTGTAccggaagaaaaaaataaagatgacTTGGATAAGACTGACAGTGAAGAGTTTAATAGTGACTCGAATAGAGAATCAAGTAGTTCTCATTGTTTGAATATATCAAACAAAgATGACGTTCTGGATTTCACGATAACTTCCGAAGGTACCAATGAGTCTGAGAATACTGTAAATACAGAGCAAGAAGACTCTCATGATTCTGTTAAAGCTCCTGTACAGACTGATACCTTAGAAAAAACTAGTCCTGTGTTTGGAACTTCTGTATTAAGCAAACACAATTCTATAAATGTCATAAATGACAATAACAGTCACCTAAGCATCGACGAAGAATCTAACTCAAGTACTTGTGGAagtaaaaatgatatacaaatatcaCCTAAGCTACAAGAATTTTTCCCTGTACCTACGTTtacgaagaagagaaagaaaagtacTTCTAAAAATACCCCAACTGTGGCTGTTGTTGACGACCTGTTGATAGCGATGCAACAGAAAgaagcagaaaaaaaagaaaaagggcaacaaattttattgaacaaaCAAGAAAGGGAAAAGGCAAAAACAATAAGAGACAAAGAAACAACTATTGTGAagcaatataatgaaaataagaaaaaaaaaatacaaaagaaaaaagaacttaaattacaaatacagAATTTGAAGAAGGCAATCAAATCGGAAAACAGCAAAGAAAATGTTGGTCCCTTAACAGAGCGGCTCCAGAAAGTGAATGCCGAATTAGCTGAATtggaaaattcattaattctA
Protein Sequence
MARKKINEKTVKETAKKKKKSASGQYRRAVAKKKRSEKNYSVETLQAALNATGEGLTLRQVAHSFGVPKSTLFFKLKYNSPLECRKGPKTVLSAEEENEIASWIVFCADSGFPVNKTRLLDCVQKYFNNNKAKTPFKNNRPGQHWYRAFMNRHPNLSTRIAQNLTSTRAAVTEVDLRNWFAKVKQYLDTKNLLHIEPHRVFNLDESAFMLVPKDNKVITEKGVKAPYQIVSGNEKASLTILFTVAASGVMPPPMILFDLKTSPKKNVLDQIPRGWGVENTERGWMTGESFYSYISNVFYKWLQENNYVFPIILYVDGHSLHMTLPLLKFCKEHLIELVVLYPNATHIIQPLDVAVFHPLKDSYRKVLRQWRIDNNVVDVKKHMFAPVLKMALESYDLTDAVKNGFRACGLYPFNADAVNYNVLSKKSKKKDASINLHSTNNSDQDSIIKNTELLAMFEKNVISPDIVESFKQAESENKWNGDVKYVALYESWLKLKKLCKMHDVPSNEALTVENSLPADQPIPNADLIDMATNTASGATDEIMLDVSSHSDNQLDLSVINVADENSLDMSYAITPSIEQNTLAELPVAELIELYDELGNRVTATVIAINDDVTMSSDSSPSSADTRVDSQLVPEEKNKDDLDKTDSEEFNSDSNRESSSSHCLNISNKDDVLDFTITSEGTNESENTVNTEQEDSHDSVKAPVQTDTLEKTSPVFGTSVLSKHNSINVINDNNSHLSIDEESNSSTCGSKNDIQISPKLQEFFPVPTFTKKRKKSTSKNTPTVAVVDDLLIAMQQKEAEKKEKGQQILLNKQEREKAKTIRDKETTIVKQYNENKKKKIQKKKELKLQIQNLKKAIKSENSKENVGPLTERLQKVNAELAELENSLIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01408101;
90% Identity
iTF_01408101;
80% Identity
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