Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: lola
Assembly: GCA_004794745.1
Location: QBLH01002019.1:6481-60704[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.6e-08 1.9e-05 23.8 0.1 9 40 424 456 423 461 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.6e-08	1.9e-05	23.8	0.1	9	40	424	456	423	461	0.87

Sequence Information

Coding Sequence: ATGAAAATACGTGGATCGATCGCGAGTGAGCAGAAACGAGGAAACGAAGCCAGAACTACCATGGAGGACGACCAGCAGTTCTGTCTCAGGTGGAACAACCACCAAAGTACGCTCATACAAAACTTCGACACACTCCTGGAAAGCGGGACGCTGGTCGACTGCACCCTGGCGGCGGAGGGGAAGACTCTCAAGGCCCATAAAGTAGTCCTCTCCGCGTGCAGTCCATACTTTGAGTGCCTCCTCAGCGAACACTATGACAAGCATCCAGTCTTCATACTCAAAGATGTTAAATTCAAAGAACTTAAGGCAATGATGGATTACATGTACAGAGGGGAAGTAAATATTTCCCAAGACCAATTGGCAGCACTCCTCAAAGCCGCCGAGTCTCTGCAAATTAAGGGCCTTTCGGAAAGTAAAACTGCTGGCAGTAGTAAGACGGAGTCCAGGCCACAGAAAACCGTCTCACAACCTACAGCACCATCGTTAGACATTCCACACGCGTCTTCCGGTCTGACGATAGAAAAGAACAAAGTTCCTAGGCAGAGTTTGACGCAAAGTTGCGTAGGGGATATACCAGAGGATACGGCTAGTCCTCAGGTGTCGAAAGGGCTCTCCTCGAGGGAAGGTTCGCAAAGTCCAACAtccagaaaaagaaagagaattcgAAGAAGAAGTTTAACCGACGATAGTACGATAGAAAACCAAGATGCATCGAATTCCAGTGACATACCTCAGCAAATGGGTGTACCGGCTCTTGGTATCGCGCCAGTGGCAGACGAGAAAGTACACGCAGATCCAACAGACTCTCTCGGCAGGTCAGCTTTAATGACGCAGTTGACGAAACCTGCCGACGAGATGTTacagctGCCACTCGAAAAACCCGAGCCAAACGATAATCTCATCGAGCCAAAGTCTGAATACCTAGATGATGCTGAGGAGGGCGTCGAAGATCTGACGCTGGATGACGATATGAACGACCTTAATGACATGGAACAGGACAACAATCGAGCTGGACCTTCCCACGACTCCGCCCAACACCCCGGTGGGGGGGCGCGGTCTCGGTCGAGAGGGAATTTGAGTAGTGATGACGGTGGTGGTCGTGGTAACGGTGGCGGAGGCGGTGGTGCCCCATGGGCTTCCCATTTCCTCGAATGTAAAAAAGTGCCAAACATGAGGCGGCCACGCCCGGACGTTGACGTAGGCGCGTTGCTTAAATCACTGGCGAACAAGCAGGGCAGAAAGTATAGCTTAGACTCGGTTAAAATGTCCCTGGAGGCAATATTGCAACAGGGGGTTAGCACCACTCAGGCGTCCGAGATGTACGGCATTAATCGCTCAACGCTGCAGttctatttgaaaaaattgaacgTCGTCAGGAGGAGATGGAGACAACAACCTTCTACAGCTGGTCTTGGCTCATGGCATGTTACTGGTGACCGAAGTAATGCGGGGGGTGTTGTGGGCTCTGTGGTAGGAGGTCCCGGAACGGCAGACGAGGTTTTTCTAGCAGCTCAGGAGGGCGTTCAGCGCGACTCACAAGCTGCCACGCTGCATTGGTCACAGTCCACTGGGGTGCATCGGCAACCCACGGCACATTACCGCAGACTCTCCTGTCCAAACTGCGGTCGCAGCTACAAGTATCGAAGCGGTCTGCGGGGACATATCGCCGACTGTCTctcggaaagagagaaattggAGGCTGATTTTCGTCAACGGCGGGAGGAGCTATTGCAGCGAGaccaacagcagcagcagccgccgccaccgccgccgctacAGCGGCAGTTCACTGAGAAAGACGTTCGAATACTGTACAAGTTTTGGAAATCACACATCATACATGCCTGTGGACCGACCAAGTTGAAGTGTGTTTGTCCGCACTGCGGAAAACCTTTCTCCAGTCCCGATACTCTCACCGACCATATGATTCAGATACGCCTTAAGATGTATCCGCCTCATAATCACATTAGCGGGAATCGTTGCTGTTTCTGCAACAGTCCGTACCCGACGATAGCTCATCTGAAGAGCCATCTGACCAGAGGCTGCTTCATGGACCCGTCCTTCTCGATCGAGAAGCGGCGCAGCATCAACAGAATGGAGTCCAGAAATTATGTGTGTCCAAAGTGCTCGCAGGGCTACAAGAACAAACGTACGCTGGACACGCATCTGCGTATCGCGTGCGGCCGCGAGCCGAAGTTTCAATGCCCGTATTGCGGTCTGAAGAGCAAACATCCGCCGAACATTTACACGCACATTAGACGCAAGCACAAGGGCCAGGATCTCTTTCTCATAgagGAACCGAAAGAAGAATACTCAGATGATGATTTGAATGACGACGAAGTAGCAAGTCGAGCTCATATCGAGCCAAAAGAGGATAAATTATACAGATGTCTTGACTGTGATAAAAGATTTAGAAATCCACGGACGCTTAAATCGCACAGATCGAACGATTGCGGAAAATCATACACTTgtcgaaaatgtaaaaaggtGTTCGAATTCCTCACGTCCGTCGCTCGGAAGTATATATGTGAATTATGCGGCAAGGGCTTTAACTTTAAGCGCACTTTTTACCACCATTTGAAGAACAACTGCTACTGGAACCCGAGTTCCAAAAGGTACCACGCGTTGAAGTCGAAACCCTTCTCATGCTCCAGATGCGGTGCCTCGTACTTGAAGAAGGAGTCCCTAAGATGGCACGTGCGTCACGATTGTGGTAAAATTTTGAAGTGCAACGATTGCGGCAAGACCTTTCTGCAAACGACCACCTTGCGCAAGCACAAGAAGAAAGAGTCATCGCAAGAGATAATAGCATCCTCGGTGAAGACAGAAAGGCCATggggagaagaaaaaatattgaagcgAAAAGAAAAGTCACCAGAGTTAAGAGGGAATAGATCTAAAAGAAACAGACGAGACTCAACAGACTTAATTGATATCAAGGATGAGCCTTTAACGAGTACTGCGCAAAATTCAGTGAGCTTTGTCGAAGAACCTTCTAAGCCTTCAACGAGTACTGCGCAAGAGTCAGTGAGCTTTGTTGGAGAACCTTCTGAGCCTTCAACGAGTACTGCGCAAAATTCAGTGAGATTTGTCGAAGAACCTTCTGAGCCTTCAACGAGTACTGCGCGAGAGTCAGTGAGCTTTGTTGAAGAACCTTCTAAGCCTTCAACGAGTACTGCGCAAGAGTCAGTGGTCTTTGTTGAAAAACCTACTAAacatttcgaaattatttctttaaacgaTAGCCAGaccgataacgataacgagaATATCGGCAGCGATAACGAGGATAACGAGAGCTCTCCGTCGTCTTGGACCAACTCGAAAGACGTCGCAAAATTGAGGAAGAAGCACAAGTGCCCGTATTGCGATGCCGTTTATGAGAGTCGCGCCAATCTCGTTTATCACATCATGACAACGTGCTTGTGTAACCCGGACTCCAAGACCAACAAGACTGCCAACTTCAAATGCAAGCAATGCGGCCGTAATTATAGTTACTTGAAAAACCTGAGATACCACCAGAAACACGAGTGCAAGAAAACGGTGAAGTGCCCGGATTGCGGCAAGGTCATGCAAGGATCATTCATTCCGGAACGTCATAAGATGAGACATTGCGTGAACCACAAATCATACGCAGCGACACATCCGCTTTACGGGCAGGTGCACCCGTCGTCTTACGTACACCCCCAGGTAATGCCTGGTCGCGGCGTGACCGCGGAGTCTTATCAACCCCAAAGGGACGGCCTGAACGCGAGGGAGAACGCGGAGGAGAGCACGTACCTTTACGTCGACTCGACTCACCGTCAGGAAACCGCCGTAGCGCCGCGTTTCTATGCGTTCTTCGGATTGACGAGAGACGCGAACGGCGGCTCTAACCGAAGCACGCGATTTCCCTGCACGAATTGTACGAAAGTGCATGGTACGAATGGCAGCCTGAGATACCAATACGGCCAGCCGCCTCGATTCAAGTGTCTCTACTGTGATTTCGTCTCGATGAGGACGGCTGATATACGACGGCATATATGGCGGAGGCACGAGAATCGCGCCGTTTGCGTCCAAGACATCCAACACTCGTCCAATGTTCGATATAACATACaagttatgcatagtaataattttgatcatgaaaaattttctcaaaatattatattattgaaattattagcTCCTCTTGATTGA
Protein Sequence: MKIRGSIASEQKRGNEARTTMEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKTLKAHKVVLSACSPYFECLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTAGSSKTESRPQKTVSQPTAPSLDIPHASSGLTIEKNKVPRQSLTQSCVGDIPEDTASPQVSKGLSSREGSQSPTSRKRKRIRRRSLTDDSTIENQDASNSSDIPQQMGVPALGIAPVADEKVHADPTDSLGRSALMTQLTKPADEMLQLPLEKPEPNDNLIEPKSEYLDDAEEGVEDLTLDDDMNDLNDMEQDNNRAGPSHDSAQHPGGGARSRSRGNLSSDDGGGRGNGGGGGGAPWASHFLECKKVPNMRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQQPSTAGLGSWHVTGDRSNAGGVVGSVVGGPGTADEVFLAAQEGVQRDSQAATLHWSQSTGVHRQPTAHYRRLSCPNCGRSYKYRSGLRGHIADCLSEREKLEADFRQRREELLQRDQQQQQPPPPPPLQRQFTEKDVRILYKFWKSHIIHACGPTKLKCVCPHCGKPFSSPDTLTDHMIQIRLKMYPPHNHISGNRCCFCNSPYPTIAHLKSHLTRGCFMDPSFSIEKRRSINRMESRNYVCPKCSQGYKNKRTLDTHLRIACGREPKFQCPYCGLKSKHPPNIYTHIRRKHKGQDLFLIEEPKEEYSDDDLNDDEVASRAHIEPKEDKLYRCLDCDKRFRNPRTLKSHRSNDCGKSYTCRKCKKVFEFLTSVARKYICELCGKGFNFKRTFYHHLKNNCYWNPSSKRYHALKSKPFSCSRCGASYLKKESLRWHVRHDCGKILKCNDCGKTFLQTTTLRKHKKKESSQEIIASSVKTERPWGEEKILKRKEKSPELRGNRSKRNRRDSTDLIDIKDEPLTSTAQNSVSFVEEPSKPSTSTAQESVSFVGEPSEPSTSTAQNSVRFVEEPSEPSTSTARESVSFVEEPSKPSTSTAQESVVFVEKPTKHFEIISLNDSQTDNDNENIGSDNEDNESSPSSWTNSKDVAKLRKKHKCPYCDAVYESRANLVYHIMTTCLCNPDSKTNKTANFKCKQCGRNYSYLKNLRYHQKHECKKTVKCPDCGKVMQGSFIPERHKMRHCVNHKSYAATHPLYGQVHPSSYVHPQVMPGRGVTAESYQPQRDGLNARENAEESTYLYVDSTHRQETAVAPRFYAFFGLTRDANGGSNRSTRFPCTNCTKVHGTNGSLRYQYGQPPRFKCLYCDFVSMRTADIRRHIWRRHENRAVCVQDIQHSSNVRYNIQVMHSNNFDHEKFSQNIILLKLLAPLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406643; iTF_01406776;
90% Identity: iTF_01406643; iTF_01406776;
80% Identity: iTF_01406643; iTF_01406776;