Tlon010699.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- -
- Assembly
- GCA_004794745.1
- Location
- QBLH01001059.1:6205-7927[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-09 2e-06 26.9 0.0 2 38 14 50 13 55 0.88
Sequence Information
- Coding Sequence
- ATGGTACGCACGTTTCGTCGCAAAACGACTCCCGTCGACAAGGAGCAACTCAAGAAGGCAGTTCTTGCGGTAAGAAGAGATAAAATGAGCGTTTCCGCAGCCGCAAAACAATTCGATGTTCGGAGAAGCACGTTGAAGGACTGGTTGAAGAAGAACAACGATGAGATAGAAAATTTGGATGACGTGGTCGTACTACATAAAGGACATATCTCGGACTCTAAAACTGAAAAGACTTTGGTGGAATACTTAGTACATTGCAACGATATGTACTTTGGGCTATCTGCGAAGGAAACCCGTGGTTTAGCCTTTGATTTAGCCAAAAAATTGAATCTGAAGGTATCGTGGGAAGCCGCTCGCATGGCCGGTGAAGATTGGCTAAGCAGCTTTCTCAAACGACATCCAATGTTATCCATACGCAAACCAGAAGCGACAAGTTTAGCACGTGCCACCAGTTTCAATCGAACAAATGTAGAAAGGTTCTTTGCGCTGCTAAAATCTGTGATGGATAAACATCATTTCCAGCCTCACTGCATATGGAATATAGATGAGACGGGAATTACAACCGTTCAGACACCGAATAGAGTCATCGGACGTCGAGGAATGAAACAAGTCGGGCGAGTGACTTCTGCGGAAAGAGGAACCCTCGTAACTTTGGCGATGGCAGTGTCAGCAACCGGACATTCTTTACcgccattttttatttttcctcgtaaaaatttcaaggaaCATTTCCTTAACGGCGGACCACCAGGCTGCACAGGTGTAGCGAATTCAAGTGGCTGGATGAATGCGGACCATTTTGTCCAGTTTCTACAGTTCTTCCAGTCCCATGTGCATGCTTCCGTCGACGCCCCAGCTTTACTGAAACTCGACAATCACGAATCACATTTGTCCATCGCTGGTCTCGAATTTTGTAAAGCGAATGGAATCATTCTCCTATCATTACCGCCGCATTGCTCGCACAAAATGCAACCGCTGGATCGCACCGTCTTTGGCCCGTTAAAGAAAAGTGTACACACACAGTGTGATAGCTGGATGTCGTCGCATCCTGGTAGATCAATGACGATATACGATATCCCCGGAATCGTGGCTAAATCACTGCCACTTGCCGTAACGTATCAAAATATTGTGTCCGGGTTTGAATGCACTGGAATTTCTCCACTCAACCCGGACATTTTCCAGGAATACGAATTTTTGCCGAGCAGTGTTACGGATAGGGAGATGCCTTCTACTTCCGCTCATCTCGAAGAA
- Protein Sequence
- MVRTFRRKTTPVDKEQLKKAVLAVRRDKMSVSAAAKQFDVRRSTLKDWLKKNNDEIENLDDVVVLHKGHISDSKTEKTLVEYLVHCNDMYFGLSAKETRGLAFDLAKKLNLKVSWEAARMAGEDWLSSFLKRHPMLSIRKPEATSLARATSFNRTNVERFFALLKSVMDKHHFQPHCIWNIDETGITTVQTPNRVIGRRGMKQVGRVTSAERGTLVTLAMAVSATGHSLPPFFIFPRKNFKEHFLNGGPPGCTGVANSSGWMNADHFVQFLQFFQSHVHASVDAPALLKLDNHESHLSIAGLEFCKANGIILLSLPPHCSHKMQPLDRTVFGPLKKSVHTQCDSWMSSHPGRSMTIYDIPGIVAKSLPLAVTYQNIVSGFECTGISPLNPDIFQEYEFLPSSVTDREMPSTSAHLEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01409014;
- 90% Identity
- iTF_01408115;
- 80% Identity
- -