Tlon011077.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- -
- Assembly
- GCA_004794745.1
- Location
- QBLH01001792.1:348-4702[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-12 3.5e-09 35.8 0.0 2 38 52 87 51 93 0.91
Sequence Information
- Coding Sequence
- ATGCCAGCCaaagctaagaaaaaaaagaatgctacaaaaaataagaagaagaaagaaacattgagtacagttaaaattaaaggaGTGGTCAAGAAAGTAGAAAAgagcaagaagaaaaaaggatggaagaaggagaaaagaaaacagtaCTCTCATGAATCACTAGAGAAGGCTCTGCAAGCAGTTAACAAGGGCATGTCATACAGGAAAGCTGCAGAAATGTTTGGCGTACCGCCAACTTCTCTTCATAGGACTGTGAAAAATcctcataaattaaaatcaaaaagtAGTCCCTCTACAGTTCTACCTGCAAATATAGAACAAGATATTATTAACTGGATCTTGTATCGAGCAGAAAGAGGAAACCCAGCTACGAAAACTGAGTTGTTAGATTctgtgcaaaattatatacaactaGAAGGGACAAAAACTCCCTTTAATAATGATAGGCCAGGACGACACTGGTACGAGAAATTCAGGAAACGACATCCTGAAATAACTCTCAGGACACCTCAGCATTTGAGTATGATTCGGGCTTCTGTTACTGAAGAGGATATAAGAGGCTGGTTTGAAGAAATTGGATCGCACTTGAAGAACAAAAATCTATTAAGCATTCATGCATCAAGAGTCTTCAACTGTGACGAAACAAACATACAATTTGTACCAAAATCTGATAAGGTCTTAACAGAAACAGGAGCAAggaattcatataaaatatttgatggcTGTGAAAAAGAAAGCCTTACTGCTTTGTTTATGTACAGCGCTGATGGTACGCGAGCTCCTCCAATGATCATGTTCAAGTACAAAGAAGTTGTaccatcaaatattttaaaaaagtgccCAGTAGGTTGGGGTATAGGAAATTCAGAAAATGGATGGATGACTACCGAAACATTTTATGAATACATAACTAATGTTTTTTATCCTTGGTTAGTAAAGAAGAATATTGAGTTCCCCATTATTGTTTATCTTGATGGTCATTCGTCGCATGTCACCATCCCTTTGGTATCATTTTGTAAAGAAAGGCAAATAGAGCTTATCGCTCTATTCCCTAACGCAACCCACATTATGCAGCCTCTGGACATCGCTCTTTTTCATCCTTTTAAAGATTTGTGGCGCAAAACCGTAATGAAATGGAaggttgaaaataaaatttcaaagctGAAGAAGGAACATATTCCTGTAGTATTGGAAGAAGCTTTAAATTCATTCGATAATGAGAAACAAATCATTCAGAACGGATTTAAAGCAACTGGCTTAATGCCTTTTAATCCTAATGCCATTGAGTATAACGTTTtacacaaaaagaaaaaaactaagAAAAAGGATCAAGTAGATCAACAATTACAAAACCAGAAAAGTGACTGCCAAGAAACTGAATCTATGAAACAACATCTACTTACCTTTGAGAAAAATCTATCTGATGATGTACTCCAAACTTTCAAAGAGGCAGAGGCTAGCGGCAAATGGGATCAAGGCATTGAGAAGTTCGCTTTATTTCAGTATTGGCTTGACATAAAGAAGGCTGCGAGTGATAATGTTGTGAAAGTGCGTCCtacaattaagaaaattgagaacctgtcaaatcataaaataattttagtaccTCACCCTGTGAGTGATAGTCTGACTGATAATCCTGTGAATGACAGTATTTTGAATGTAAACAATGATGTGATAGTTATAGAATTAGAGAGTAGCATTCACGACGATGAACTCCATGCTTTTGTGAAAGACAGCAAGTTAGATCATATGGTTGTAGACGTAAACTGTACAAATGAGCATATTAGTAATACTTCAAGCGATTCATTGTTACATGATAGTATTGATAATAGCGTATCAGATGTATTCTCACTCgcaaacttaaaaaatttgacacatGAAAACTTAAGCAATGAAAAATCTGAACAAggtttgtaa
- Protein Sequence
- MPAKAKKKKNATKNKKKKETLSTVKIKGVVKKVEKSKKKKGWKKEKRKQYSHESLEKALQAVNKGMSYRKAAEMFGVPPTSLHRTVKNPHKLKSKSSPSTVLPANIEQDIINWILYRAERGNPATKTELLDSVQNYIQLEGTKTPFNNDRPGRHWYEKFRKRHPEITLRTPQHLSMIRASVTEEDIRGWFEEIGSHLKNKNLLSIHASRVFNCDETNIQFVPKSDKVLTETGARNSYKIFDGCEKESLTALFMYSADGTRAPPMIMFKYKEVVPSNILKKCPVGWGIGNSENGWMTTETFYEYITNVFYPWLVKKNIEFPIIVYLDGHSSHVTIPLVSFCKERQIELIALFPNATHIMQPLDIALFHPFKDLWRKTVMKWKVENKISKLKKEHIPVVLEEALNSFDNEKQIIQNGFKATGLMPFNPNAIEYNVLHKKKKTKKKDQVDQQLQNQKSDCQETESMKQHLLTFEKNLSDDVLQTFKEAEASGKWDQGIEKFALFQYWLDIKKAASDNVVKVRPTIKKIENLSNHKIILVPHPVSDSLTDNPVNDSILNVNNDVIVIELESSIHDDELHAFVKDSKLDHMVVDVNCTNEHISNTSSDSLLHDSIDNSVSDVFSLANLKNLTHENLSNEKSEQGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01405611; iTF_01405612;
- 90% Identity
- iTF_01405611;
- 80% Identity
- -