Tlon011941.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- -
- Assembly
- GCA_004794745.1
- Location
- QBLH01000073.1:6090-6503[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-14 6.7e-11 41.3 0.1 2 43 17 57 16 58 0.91 2 2 6.5 4.9e+03 -3.1 0.0 33 43 123 133 123 134 0.79
Sequence Information
- Coding Sequence
- ATGCCAAATAAAAATGGGAATCGAGAACATACGCGAGGTAAATGGTCGCAGGAGCAGTTAACTGCAGCCCTAGAAGCCATTAAAAATGGCACTTCTATACGTCAAGCAAGCATTGAAAATGGTATTCCCAGAAAGACTCTtgaaagaagatttaaatcTGCTAACGCAACAAAGGGTGGAATGGGGCCAACCTGCTCGCTTGGAATGAAGAATGAAGAAAGATTGGTGCACCATATTAAAATGATGCAAAAGCATGGTTTTCTACTTACTCGAGATGATCTTCGTACACTGGCTTATAACTTTGCTAATCAACTTGAAATCAAACATAGATTCAATAATGTAACTCAAAAAGCTGGATATGAGTGGCTTTATTCATTTTTGTCTAGACATCCTGATGTTTCAGTACGCAAATAA
- Protein Sequence
- MPNKNGNREHTRGKWSQEQLTAALEAIKNGTSIRQASIENGIPRKTLERRFKSANATKGGMGPTCSLGMKNEERLVHHIKMMQKHGFLLTRDDLRTLAYNFANQLEIKHRFNNVTQKAGYEWLYSFLSRHPDVSVRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01407162;
- 90% Identity
- iTF_01407162;
- 80% Identity
- -