Tlon004438.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax longispinosus
Gene Symbol
bab2
Assembly
GCA_004794745.1
Location
QBLH01002112.1:1152860-1160921[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.1e-16 6.9e-13 47.6 0.0 2 42 376 417 375 420 0.94

Sequence Information

Coding Sequence
ATGTCTATGCAACAGTTTTGTCTGCGGTGGAACAATCATCAACCGAATTTTATCTCGGTTTTTTCCAATTTGCTGAATAACGAGACTCTAGTGGACGTCACTCTCGCCGCCGAGGGCAGGCAAATTCAGGCACACAAAGTTGTTCTGTCAGCATGCAGCACGTACTTTCAGTCGCTGTTCACGGTGAATCCTTGTCAGCATCCTATTGTCATACTCAAGGATATCAAGTTTTCCGACCTCAAGATTATGGTggattttatgtattatggAGAAGTAAACATATCTCAAGAGCAATTGCCATCCATCATAAAGACGGCAGAGAGCTTAAAGATAAAGGGACTCGCGGAAATGCATACGGCATCGTTAACAAAATGGCCAAGCGGAAGCAGCGAAACAGGCGGAGGAGACCGTGGTGAATCTTGCTCGCCAAGCCCATCTCCATTGTCTCCTTCGTTTCGCAGAAAAAGGTTAAGGAAGTCTTCGACTGGCTCGACATCCGGTTCCGGTGACAAACCAGaggaaattaatgaaatcaCATTAGTGGCTACTAACATTGTCAAACCCGAACCCCTCATTGTGTCGCAAGAAAGCGGGGAGAACTTGAGGCGACCAGTAAACACCAGCACAGAATCTCAAGGCAGTATTGATGAAGATCAGATATcaattATGAGTAATATGGAAACTAGTTCCGCTAATACGCCAGCTCAAAGTGACGGTTCTATCCAAGATGTAAGTCAACAATCGGGAGGAAACATTGGACAAAGTTCTGTTTCTTCGCAACCACCTGTTCATCAAGGATTACAATGGACTATTATGGAGCACACATATCATCCGACACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCGTCGGCATTTACGACGCCCGAAATAACAGCATCCTCGACCATCAGCGATCAGTACTCTGGTACCAGCACGACTGGTTCCAGTTGCGCCCTGACGAACTATCCGAACTCCTCCCACGGGACGTTGCAGCACGCGTCGTCGGGTGGCCCCTCGCCATCGACGCAGTGCCCCAGTAACTGCCAGAGCCCCTGCGCCAGCCCGCAGACTGCGATTAAGAGGAAGCGCTCGACTAATCCGCAGGCGGACGAGAACTTTATACGCGCTCTCGACGCCGTGCGCTACGGTGGTATAGGGTTTTGCAAGGCGGCCAGGATGTTCGGCGTGAACAACCGAACGCTCTGGCTCGAGTATAAGAAGCGCGGCTACCCGAACAATCGGCCCAGCCTCAAATCTCGCGTTAAGCAGGAGGTCAATTCCTCGCCGCCGCCGGCACCCCCGGCGCAGCCCATGAACTCGCAGAGCCCAACGCCTATGGGCCCGCCCACGACTCCGCACAGCACACATAACACACATAGCACGCACACCATGCTGACCAGCCACAGTCCCCACACAATGCTGAGTGGTTACATTGACAGGCATACGGACTATACGCTACCGAGCTCCAcgatgcctCATCAATTTACGTTTACTACATCTAAAAGCAACGTCGATGTACCGATTCTTCTCGCCACGACTAAAgtctacttatttattattatagttcttCATTGCAAGCAGTCGCACATAACGAAAAGGACTCGGCTGCTGATCAGACAGCCGCGAGTGAAGAAGGAGCCGAGTCACCTGTCGCCGGACGGCGAAACGGGCTCCTTTTCGCCGCACATTGTCTCGACCTCCGTTCACCTCGCCACGCCGACGCTGAATCTTCCCCAAACGTCGAGGAGCTTCGAAGAGTCCCGTATATCGCCACCGCCGCACACCATGCTGGTCAGCCAGCAGTCGAATCTGCTGGCGGTGACGACGCCGTCCAACTTGCTGGCGGTGCCCCAGCCGTCCTACCTGACGAAGCAGCACTCGCATCCGCTGCTGTCCAGCCAGCAACCGAGCACGTCCGGGACGTACTGGATACACCGGCAGCACTCGCATCCGGAGCTGCCCGGCAGGACCACGAGTCCGTCGATAGTGATCGAGCCGGCGCCCGTCCTTAAAACGGAGGAAGAGGGAAGCGAGGAGACCTCGACTCCGTCTGCATCGGCTACCACCTCCGAGCTGGGGACCAGCGGCGGCACTTCCGGCGGACTGAGGGTCAAGACGACGGAGTTACGGCGAGCTTCCTCATCACCGCAGACGAGCAGTAGCAGAGAGCCTCGCGAGAGCATGGGGGATCAACGATTAGGTCACTGTCCGGTGTTACGCCAAGGCCCTGCCTTAGGCTGCAATCACTGCTGGAACACGATAGACGCCCACGGCAGGATACTTCGTAGGAAGACCAAGTATCATTGTCCCGAATGCCAGATCAATTTGTGCATCGTGCCCTGCTTTCAGGAGTACCACGAGCAGCAGCGCGAGCTGATTTCTAAACTGAAGCCCTTACCAAAAACTAGCTCCGTTTAA
Protein Sequence
MSMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRQIQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDIKFSDLKIMVDFMYYGEVNISQEQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSETGGGDRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDKPEEINEITLVATNIVKPEPLIVSQESGENLRRPVNTSTESQGSIDEDQISIMSNMETSSANTPAQSDGSIQDVSQQSGGNIGQSSVSSQPPVHQGLQWTIMEHTYHPTRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYPNSSHGTLQHASSGGPSPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAPPAQPMNSQSPTPMGPPTTPHSTHNTHSTHTMLTSHSPHTMLSGYIDRHTDYTLPSSTMPHQFTFTTSKSNVDVPILLATTKVYLFIIIVLHCKQSHITKRTRLLIRQPRVKKEPSHLSPDGETGSFSPHIVSTSVHLATPTLNLPQTSRSFEESRISPPPHTMLVSQQSNLLAVTTPSNLLAVPQPSYLTKQHSHPLLSSQQPSTSGTYWIHRQHSHPELPGRTTSPSIVIEPAPVLKTEEEGSEETSTPSASATTSELGTSGGTSGGLRVKTTELRRASSSPQTSSSREPRESMGDQRLGHCPVLRQGPALGCNHCWNTIDAHGRILRRKTKYHCPECQINLCIVPCFQEYHEQQRELISKLKPLPKTSSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01539690;
90% Identity
iTF_01477008;
80% Identity
iTF_01406645;