Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: -
Assembly: GCA_002237135.5
Location: CM026972.3:12481429-12483867[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.8e-06 0.00089 20.9 1.1 1 23 373 395 373 395 0.98

2 7 6.3e-05 0.0097 17.6 2.5 3 23 403 423 401 423 0.98

3 7 1.4e-05 0.0022 19.6 1.5 1 23 555 577 555 577 0.97

4 7 2.3e-05 0.0036 19.0 2.4 1 23 583 605 583 605 0.98

5 7 0.018 2.8 9.8 1.0 1 23 611 633 611 633 0.99

6 7 0.0023 0.36 12.7 0.3 2 23 677 698 676 698 0.97

7 7 0.00069 0.11 14.3 1.7 1 23 705 727 705 727 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.8e-06	0.00089	20.9	1.1	1	23	373	395	373	395	0.98
2	7	6.3e-05	0.0097	17.6	2.5	3	23	403	423	401	423	0.98
3	7	1.4e-05	0.0022	19.6	1.5	1	23	555	577	555	577	0.97
4	7	2.3e-05	0.0036	19.0	2.4	1	23	583	605	583	605	0.98
5	7	0.018	2.8	9.8	1.0	1	23	611	633	611	633	0.99
6	7	0.0023	0.36	12.7	0.3	2	23	677	698	676	698	0.97
7	7	0.00069	0.11	14.3	1.7	1	23	705	727	705	727	0.96

Sequence Information

Coding Sequence: ATGGAAGTTTTAATGAATGTGAAGTGTTCTTCAACAACAACGAAGCCTTCCAGTACAACACAACACGCAATCGATGTGgttgacaacaaaaacaaactcaagcaacaacaacacattTTGGGTTCCTTTATGCGTGGACCTTTGGCACCTGACATCAAATCTTTATCAAACCAGAGCTCGCAATCATTATTAGCAGTAAAGAATACCGTTCCGTCAAAGCAGGAAGTGATCATGATAGCAAATTCGGAGTATGTGACAGCAAAACATTGTTGCAACCAACAGGATTTGAGTGAAATACCTGTTGCTACAACAGCAGTGATTCAAGAACTAAATGTGAAAGCTACTACTTCCCCAGTCTATCAATCAACAATATATGACGCAGAGCGTAATAAATCTTGTTCTGCTTCTGTCACTGTTACGCCTGTTACTCCTGTTACTGTACAGGAGTCAATCGAGTCTGTTATCAGTACCCAAAATAATAATCAGTACGACATCCAATACGAGTATCACGAGCCAGAGGAAAACTTTGTATCAATTGATGATGCAAAGATTAAAGGTTTCTTGATGAAAATTGGACAGGAGcagaaatatgcaaaaaataatgtcaGAGGTACGATCACAAGCAAAGTCGTGGCAACTTCGAATACAGAAAATGTTGTTTTTGAGATTATTGAGCTAGATGATGATCCAAATAACGAACCAAATGGAAAAAACAATGTTGATGACGTGCCTGCCACATTACAACATACAGTATGCTATagtaaaaaaagtcaaaatttgAAATCCGGTAACCATTCAGCTATAAAATCCTCAAATGCAGAGGTGATAGCTCAGATAAACTTAATCGAAAGTAGCGACTCTGAATCCGATGAGAAGAATAGTAATGTGAGTGATAATGATAGATTACCATTAGCTGTAGCTACAGTTTCTTGTGAATTACAATGCGACGATGATGAAAATGTGGATGTGACATTAAGACAGAAACATTCCAATGAAGTTATAATTTTACCAtctgatgatgatgacgacgaCCTTAATGATGATCTTAATGATATGAATGAAATGGAACCTGAAATATGTTTTAGTGATTACGAAGAACAGAAAGAACGAACATATTTTGAATGCTTTCTGTGTGGAAAGAAGGTTCAGTCCAGTTATAACTTAAGGCGGCACATGATGATACATACTGgtGAACGTCCTTTTGGTTGTGATATGTGTGAAAAACGTTTTCGTGAATTTAGTGACTTAAAAAAGCATCGTCGACGTCACGTGAAAGAACCTAATTTCCATTGCATGGTTTGCCGTGTGAATCGACCGACTGAACTAGATCCAACTCGATGCAATAGTTGTGATATAAAAAACAGTTCATTGTTTGCTGAAAGTCGGCAACAGTATACAGCTCCAGCATCACCAGAAAAGTCGTTGAGTCCTCCTGTAAAAAAAACACCGTCACGCAACATAATACCCTGCACACCGTCAGCACAACCTGCTAAGAGCGTTTCCCCTTTATTGGCATCCtcaacaacaatatcaacatcaacaacacTTCCACCACCTCTGGCACCCATAACCCCAACAATCGATACACAACGTTTACTTGACAATCTTCCAGCTGTACATCGACCTAATTTCAACCAACCGGGTACAACAACTCGTAAGGAATTTCCTTGTCCGTTATGTCAGCGACCTTTCGGTACACGACATAATCTTAAACGCCATTTCATGATACATACTGGAGAGAAACCTTTCAGTTGCTCACAGTGCCGCAAACCTTTTCGAGAATATTCAACCCTCAAGAAACATATGGTTACACATCAACGTGATCGGCTTTATAAATGTTTGCGTTGTCCATTAAACTTTAGAGATTACTTAGATTATATAGAACACAAAAATACGCATCCGAAAAGTGACATTATTGTGACTAGTAGCAGCAACAATATAACAAGTTGTCCTAAAAAGCGTTCCAAACTTATGCACGACGAATTCTACGATTCAAACGATGAAGACTCGTTGCCAGAAGATTGGATCGAATGCTGTGAGTGTGGGCAACGCTACACAGATATCGAGGCTTACACCGAACACTTGAAAGTACACGAAACTAACGTATTCGTCTATGAATGCTTTGTTTGCAAGAAAGTCTTTGAGGAGCACAAGACATTGTTAAAGCACATGGGTGAGCATAATTATAGTTCTAATCAAGAAAACGAACAAAAGATAGATGGAGATGATTAG
Protein Sequence: MEVLMNVKCSSTTTKPSSTTQHAIDVVDNKNKLKQQQHILGSFMRGPLAPDIKSLSNQSSQSLLAVKNTVPSKQEVIMIANSEYVTAKHCCNQQDLSEIPVATTAVIQELNVKATTSPVYQSTIYDAERNKSCSASVTVTPVTPVTVQESIESVISTQNNNQYDIQYEYHEPEENFVSIDDAKIKGFLMKIGQEQKYAKNNVRGTITSKVVATSNTENVVFEIIELDDDPNNEPNGKNNVDDVPATLQHTVCYSKKSQNLKSGNHSAIKSSNAEVIAQINLIESSDSESDEKNSNVSDNDRLPLAVATVSCELQCDDDENVDVTLRQKHSNEVIILPSDDDDDDLNDDLNDMNEMEPEICFSDYEEQKERTYFECFLCGKKVQSSYNLRRHMMIHTGERPFGCDMCEKRFREFSDLKKHRRRHVKEPNFHCMVCRVNRPTELDPTRCNSCDIKNSSLFAESRQQYTAPASPEKSLSPPVKKTPSRNIIPCTPSAQPAKSVSPLLASSTTISTSTTLPPPLAPITPTIDTQRLLDNLPAVHRPNFNQPGTTTRKEFPCPLCQRPFGTRHNLKRHFMIHTGEKPFSCSQCRKPFREYSTLKKHMVTHQRDRLYKCLRCPLNFRDYLDYIEHKNTHPKSDIIVTSSSNNITSCPKKRSKLMHDEFYDSNDEDSLPEDWIECCECGQRYTDIEAYTEHLKVHETNVFVYECFVCKKVFEEHKTLLKHMGEHNYSSNQENEQKIDGDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01405206;
90% Identity: iTF_01405206;
80% Identity: iTF_01405206;