Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: RREB1
Assembly: GCA_002237135.5
Location: CM026970.3:142467766-142473890[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.012 1.9 10.4 0.6 1 21 238 258 238 260 0.95

2 14 0.00039 0.061 15.1 0.2 1 23 270 292 270 292 0.98

3 14 2.8e-05 0.0043 18.7 7.5 1 23 298 320 298 320 0.98

4 14 1.2 1.9e+02 4.1 6.1 2 19 579 596 579 600 0.91

5 14 0.93 1.4e+02 4.5 1.1 1 21 639 659 639 660 0.96

6 14 0.0039 0.6 12.0 0.1 1 23 821 843 821 843 0.97

7 14 2.3e-05 0.0035 19.0 1.2 1 23 853 875 853 875 0.99

8 14 0.00098 0.15 13.9 2.0 1 23 881 904 881 904 0.97

9 14 0.0035 0.54 12.1 2.0 1 23 1268 1291 1268 1291 0.95

10 14 0.0001 0.016 16.9 0.3 2 23 1615 1636 1614 1636 0.97

11 14 0.17 26 6.8 6.3 1 23 1642 1665 1642 1665 0.97

12 14 2.5 3.9e+02 3.1 3.3 1 23 1768 1791 1768 1791 0.94

13 14 0.0099 1.5 10.7 0.5 3 23 1845 1865 1843 1865 0.96

14 14 0.0016 0.24 13.2 4.8 1 23 1871 1893 1871 1893 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.012	1.9	10.4	0.6	1	21	238	258	238	260	0.95
2	14	0.00039	0.061	15.1	0.2	1	23	270	292	270	292	0.98
3	14	2.8e-05	0.0043	18.7	7.5	1	23	298	320	298	320	0.98
4	14	1.2	1.9e+02	4.1	6.1	2	19	579	596	579	600	0.91
5	14	0.93	1.4e+02	4.5	1.1	1	21	639	659	639	660	0.96
6	14	0.0039	0.6	12.0	0.1	1	23	821	843	821	843	0.97
7	14	2.3e-05	0.0035	19.0	1.2	1	23	853	875	853	875	0.99
8	14	0.00098	0.15	13.9	2.0	1	23	881	904	881	904	0.97
9	14	0.0035	0.54	12.1	2.0	1	23	1268	1291	1268	1291	0.95
10	14	0.0001	0.016	16.9	0.3	2	23	1615	1636	1614	1636	0.97
11	14	0.17	26	6.8	6.3	1	23	1642	1665	1642	1665	0.97
12	14	2.5	3.9e+02	3.1	3.3	1	23	1768	1791	1768	1791	0.94
13	14	0.0099	1.5	10.7	0.5	3	23	1845	1865	1843	1865	0.96
14	14	0.0016	0.24	13.2	4.8	1	23	1871	1893	1871	1893	0.99

Sequence Information

Coding Sequence: ATGTTAGCTGcacaaactacaacaacaacgacaaatCCATCATTGGAAAATAGTCATACATTGACACAAATCAAAAAGGAACGTCGTGATTCCTCAACATCAGATTCATCCCTAGAACAATTGGATCTGGGGCGTACACCAAAGAAACTAAATACACACACATCCGCAACTTCAACGCCACACTTAACCAATGGCAATGGCTGCTCACAAACAGAACGTCTTATTCCCACCAGCCACAATTCAGATGCTGCGCACATCGAACAGCAAAAAACTGCATTTACAGATTCAGATGAAGCCAACGATGATGACTCAGCGAATGAGAAACAAAATAGCATACGTTCACAGCGGCACCATAAGAGGCGCGTTACCGGATGGCTTGATAAACGTACAAATGTTAAACTAGAATACAACGCGGATAACCCGAATTCTTTGCGTAAGAAATTTCGTTTGAATCGTAGTAGCGCAGATATCAGTAACAATACAAATTCACTAACTAATAATGAGTCCGGTTTTGTGGATGCAAGTGGAAATAGTCAATATTTGAATGCATCTACAGTTTCAGCAATGAATGCGCAACAGTCACAAAACTCACCTCAAATATCCGCCGCAGTGTCGCAAACATCGTCCGCATCTTCATCACCGCATGGTGCTGGCGGTGCTGCATCTGTTTCTAGTCCAGAATCTGGCATTGGCGAAAGAGAGGATGTCAAATATATTTGTCCAATTTGCGAGGTTGTCTCCGCAACGCCACATGAATTCACCAATCACATACGCTGTCATAATTATGCCTCGGGCGACACTGAAAATTTTACATGTCGCATTTGCTCTAAGgtaCTTTCATCTGCCTCGTCACTTGATCGCCATGTACTTGTCCATACTGGTGAGCGTCCTTTTAACTGCAAATATTGCCATCTGACATTTACAACAAATGGTAATATGCATCGCCACATGCGCACTCATAAACAGCATCAACATAATCATCATCGTCGCAACTCGAATGGAACTaagaacaataacaataacaacactaataccaacaacaacattagCTCCAGCAACACAACCAGTATAGTTGGCACCGCATTGCTGTCAGCAACACCTGCCGCCGCCACCATCTCTTTTTCTAATGCCAGCAATGCTACTAATGTGCAAATGATAAACGGCTTCAGTAGTGAAGTTGGAAAAGCAACAACCACAATGCCGTTGACTGTGTCGTCAGCAGCTACAGCCAAGTTAGCAGCAGCAATGAATATCACAGGTGCAAACAGTAAGCGCTTAAATAGCAACGGCATAGAAAGTTATGAAAGTGATGGAGGTTGCTCAACAGACTCATCAAGTGCCATCAGCCAGAGCTCAAATaatcgcaacaacaacaacaatattaagaccaacaacaaaaataataatatcaacaacaacaacaataacaacagtaataaTCACTGTAACAACGTAACTAATTTCAAACGCAAAAATAGTGATAATCGCGTTGACGCCGACGACAATACAATGATGAAGCGACGCGTGAAGACCACAATTAACAATAACATAATCGGTGCTAGCGATGAAAACCGTCTAACATTATCGGAGGGGCCTAATCTACATACAAAAACATCAACAGCGCATTCCTCCGAAGTGCACATACTCACTTGCCCTGTGTGTAATGAGTCCGATTTTGTTAGCATGTTATTGCTTGGTGAACATATGGATGCAGAACATCCTGACATACCAGCGAAATGCCGTCATTGTGATGTCATATTTCGCACACATCGTCAACTCAATGAGCATCCATGCTCACATAAAACTCAAGCAATTTCAGGAGTGACACTTGAAGATTTGTCCAATAAAAAATTCCCTCACATGGCAAAAGTGCTCTCCGAGCAAAACATGCGCACAGCAATTGCAACTCAACAATTTGAGTGCCCAAAATGTTGTCATAACTTCACGCTTGCTAAGGATTTGGATGCACATTTGCGCGAATGCATACAAGATGATCCAAAGCAGTTGTCATACTCACAACAGCAGAATCGCAATAGACTTCGCAGTCTCAGCGAAAGTTCAGGTGATGCAGAAGAAGTAGATGACAACGGCCATCCTCACCAACGTGAGGAATTCTTTCGGCAATTATAtcttcaaaataaaactttaaatcaaCAGGGCATGTATTCGGTTGCCTCTCCTCAGCACTCCGCTGCCGATGATCTAGAAATTAGTATCAAAATTGAAACAGATAATGAGAAGTTAGCACATAACTTGAGCCAACAGTCCCAGGATTCTAGAGATTTCGCAGATATTCAGTCAATCTTAAATATGACTTCACCATCTTCTACATCAAATTTCTTAAAGAATTTTGAGCAGTCCGTTAATACACCCTCCAGCAATTACAGTTTGGATAAAGATGAGGAAGAAGCACAAGACGTTTTCACAGCAGAATTTCGCAAAATGAAACTGCGCGGTGAATTCCCTTGCAAACTGTGCAATGCTGTTTTTCCAAATTTGCGCGCACTTAAAGGACACAATCGTGTGCATTTAAGTTCTGTTGGACCAGCTGGTCCTTTTCGTTGCAACATGTGTCCATACTCTATATGTGACAAAGCTGCACTTGTGCGTCATATGCGCACACATAATGGTGATCGCCCGTACGAGTGTGCTGTCTGCAATTATGCTTTTACGACAAAAGCCAATTGTGAACGACATCTGCGCAATCGCCATGCTAAGACAACACGTGATGAAGTGAAACGTGCCATAATTTATCATCCATCTGAAGACTCATCTTGTGATGATCCTAATAAGAAGTTGCATTTGTTTTCATCACCTGAATTTGATGATGACATTGACTTGCCATATCAACACCACCAGCCAAAAGATCGGTCCACACCTGTTTCGCATTTGAAAGAAATGCTCACAAGCGAAAATACTACTTCAAAACCCATGAAAATCCAAGTTAAAAGTTTAGAGAAGTTGTTGGACAAATCTTCAACTAGTAGctataatgaaaattatgatAGCTGCCGCACACAAACTACAGCAGCTACACCAGAAACTACGCCTATGGACTTAAGCACAAATGTTTTAGACTTAAGTAAAAAACCAGCTACTAAATCGATCAATAATGATGCGCAACAATCTCGTCCAGTTTCACCTGTTGCCATGAAACCGGAAATAAGTTCTGTACAAAAGAATATCCAGCTACCACCGAACGAAGTACCCAAATTCGATCTTTCCTGGGACAAATTTCTTCtcgaaaataataaacaactaTTTCCTGATATACTGAATGGAACATTGCCAAAATCATTTCCATTAGATCAAGCGCAATACTTTCAGCAATCTATGCAAATGGATCGTGCAAAGTATCTTCAACAGATATATATCAATCTTATGTTTAACCAAGCACTCTTGCAAAAATCTCTATTGCCGAACAACTTGAATGAATTTCAAGATTTCGCTCCATTCATGAATCATCTACCACTTGGGCCCACATTATCCGCGCCTTCGTTGCCAATAATGGATCCAAGTAAATCTAATGTCAACCCAACTACAAACTCAGCAGCTGCTATATTGCCACAAGTAAGTCCACTCTTATCAGATAAACCCAACACTCCTCCGTTTTCGTCGCCTTCAACTGTTCCGAATCGTGCATTGTTACCACAAGCAATACCATCCCCTACACCATCAAACCGAAATATGCTTAAGCACATATCGCCCACAGTATTACCCGGTGGACCAGTGAAGATGGTTATCAAAAATGGTGTATTGAtgccaaaacaaaaacagagaCGTTATCGCACTGAACGTCCTTTCGCCTGCGAGCATTGTTCAGCCAGATTTACATTACGCTCAAATATGGAACGACATGTTAAACAACAGCATCCACAATTTTATGCACAACGTCAACGTAATGGTCACCATGTCATGCGTGGACGCGGAGTGAGCAACGCAGCTGCTATGAATAACATAACGCATTTGCAAGCCGCTTTTGCACAGGCTCAAACTAATAGCAATAATGGAATGGGTGCACCTCCAATATCTGAACAAGTTAAATATGCCATACTTGCTCAACAACTGAAAGCCCGCAAGGACACAGATCTCTTGCAGCAAGCGTTAGCACATGGTTCCAGTAGTGTGCAACCAAGTCATATGCTTTCAAATAACAGCAACACCGGAATGCCGACTATGACTAATGGTCAGCCATTTAGTTTTAACCCTTTGAACACTGTTAACTCAAATGGTGTCGAAGATGATGAGCCCAAACTAATTATTGACGAAGAAGATGAGGATGAAGCAGAAGAAATacatgatgatgatgaagatgacGACGAAGTGCAAAAAAGCATTGATTTAAACGAAAGTTTGCCAGAAGAACAGTTACCAACACCTGTTGTTGAAGAAACTGTTCCTGcagaaagtacaaaatcaatTGAAGCTGCTAAGAAAGTTGCCGAGACAATACTCGAACAAGCTATAAAGGCAGGAAAGAATACTGATGTTATCGTAAAGCCCGAAGCGCCTGCACCACCAGCACACACTATGAAATCTATGATTGCTCAAGCGGAATCTGTaggaaaattcttaaaaaaagttGCAAGTTCACCTTTCAAAGATGAATCTCAAGATCTAGTACCTGTTTCAAAACTAGTTGATAATGCCACCAGCAACTCAGTGTCCTTTAATAGTTACTTTCGCCCAAGTGACGTAGCCAATCATATGGAACAAAGTGATGAAGAAGGTCTGGTGGCTTCTGGTAGTGCCAGCGAAAGTAACAATTCCGGCACTGAAGATATTGCCACTGCTACAGaacctaaaaaaaaatctgcataTAGTTTAGCGCCAAATCGTGTTTCATGTCCATATTGTCAACGCATGTTCCCATGGTCAAGCTCATTACGACGTCACATACTTACACACACTGGACAAAAACCATTTAAGTGTTCACATTGTCCATTGCTTTTCACAACCAAGAGTAACTGCGACCGTCATTTACTACGCAAACACGGTAACGTCGAATCTGCTGTATCAGTTTATGTACCAACTGAAGATGTTACCGAACCCATTCCTGTACCAAAATCCGTGGAAGAAATAGAGCAGCAACAAAGACAACGCGAAGAAGAAGAACGTAAAAGAAAAGCCGAAGAAGTGAAATTAGAACGAGAGCGGCTTGAGAAAGAACAACGacaaatgcaattaaatgaaCAGGAGCAACAGGCGAATAAACAAGTCATAGCTAATCAACTGCAAGCCAACACAGCCAGCAGTAGtccgaaaattgaaaatagtacAATTTCTTCTTCGGAACTGCCATTTAAATGTCATCTATGCGAAAACTCTTTTGCTGAACGTGCACAATGCTTGGAACACATCAAAAACCAGCACTCACATGAATTTGCTTTGTTACTTGCAAAATGTGCCATTGAAACAGAAGCCGAGGGCAATGCTATGAATGGCGCTGAAGATGAAGAACGTCGTCCAAGCGATGAAGGCAGCATGCCACGTACTGGCAAATATCCTGATTACAGCAATCGTAAAGTGATTTGTGCATTTTGTGTACGCCGGTTTTGGTCAACTGAAGACTTACGTCGCCATATGCGCACTCATTCAGGCGAAAGACCTTTCCAGTGCGAAATTTGTCTTCGCAAATTCACTCTAAAACACAGTATGCTACGTCACATGAAAAAACACAATGGACGTCAACATAATGGCAACAATAATGGTGACTTCTCTGCCGCTGGCAATAGTGGTTCGGAGTGTTCAGACGATGAGCAAACTACTCCATGTGTACCTTCTCCAACAAATTCAATACGTACACCCGATAAAATTCAAGAACTTTTAACGAAAGCTAATGAATGGCGTACGAGTCGTGCACTCTCAACACTCGGAGAGCAAAAGGAAAATATATCTGAAGAACAGAACAATCAAAGCGACCTCATCGGAAAATTGCTAGGCATCAGCGATCAAGGTATTTTGAATAAGTTGCTATCATCTGCTGATGAAGCTGCAAAGTTATTGGGAGTCGAAAAATAg
Protein Sequence: MLAAQTTTTTTNPSLENSHTLTQIKKERRDSSTSDSSLEQLDLGRTPKKLNTHTSATSTPHLTNGNGCSQTERLIPTSHNSDAAHIEQQKTAFTDSDEANDDDSANEKQNSIRSQRHHKRRVTGWLDKRTNVKLEYNADNPNSLRKKFRLNRSSADISNNTNSLTNNESGFVDASGNSQYLNASTVSAMNAQQSQNSPQISAAVSQTSSASSSPHGAGGAASVSSPESGIGEREDVKYICPICEVVSATPHEFTNHIRCHNYASGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHRRNSNGTKNNNNNNTNTNNNISSSNTTSIVGTALLSATPAAATISFSNASNATNVQMINGFSSEVGKATTTMPLTVSSAATAKLAAAMNITGANSKRLNSNGIESYESDGGCSTDSSSAISQSSNNRNNNNNIKTNNKNNNINNNNNNNSNNHCNNVTNFKRKNSDNRVDADDNTMMKRRVKTTINNNIIGASDENRLTLSEGPNLHTKTSTAHSSEVHILTCPVCNESDFVSMLLLGEHMDAEHPDIPAKCRHCDVIFRTHRQLNEHPCSHKTQAISGVTLEDLSNKKFPHMAKVLSEQNMRTAIATQQFECPKCCHNFTLAKDLDAHLRECIQDDPKQLSYSQQQNRNRLRSLSESSGDAEEVDDNGHPHQREEFFRQLYLQNKTLNQQGMYSVASPQHSAADDLEISIKIETDNEKLAHNLSQQSQDSRDFADIQSILNMTSPSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDVFTAEFRKMKLRGEFPCKLCNAVFPNLRALKGHNRVHLSSVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPNKKLHLFSSPEFDDDIDLPYQHHQPKDRSTPVSHLKEMLTSENTTSKPMKIQVKSLEKLLDKSSTSSYNENYDSCRTQTTAATPETTPMDLSTNVLDLSKKPATKSINNDAQQSRPVSPVAMKPEISSVQKNIQLPPNEVPKFDLSWDKFLLENNKQLFPDILNGTLPKSFPLDQAQYFQQSMQMDRAKYLQQIYINLMFNQALLQKSLLPNNLNEFQDFAPFMNHLPLGPTLSAPSLPIMDPSKSNVNPTTNSAAAILPQVSPLLSDKPNTPPFSSPSTVPNRALLPQAIPSPTPSNRNMLKHISPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRNGHHVMRGRGVSNAAAMNNITHLQAAFAQAQTNSNNGMGAPPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVQPSHMLSNNSNTGMPTMTNGQPFSFNPLNTVNSNGVEDDEPKLIIDEEDEDEAEEIHDDDEDDDEVQKSIDLNESLPEEQLPTPVVEETVPAESTKSIEAAKKVAETILEQAIKAGKNTDVIVKPEAPAPPAHTMKSMIAQAESVGKFLKKVASSPFKDESQDLVPVSKLVDNATSNSVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDIATATEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPTEDVTEPIPVPKSVEEIEQQQRQREEEERKRKAEEVKLERERLEKEQRQMQLNEQEQQANKQVIANQLQANTASSSPKIENSTISSSELPFKCHLCENSFAERAQCLEHIKNQHSHEFALLLAKCAIETEAEGNAMNGAEDEERRPSDEGSMPRTGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGRQHNGNNNGDFSAAGNSGSECSDDEQTTPCVPSPTNSIRTPDKIQELLTKANEWRTSRALSTLGEQKENISEEQNNQSDLIGKLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -