Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: -
Assembly: GCA_002237135.5
Location: CM026972.3:50160889-50167527[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.063 9.7 8.2 0.6 2 23 41 62 40 62 0.96

2 16 0.004 0.62 11.9 3.5 1 23 68 91 68 91 0.92

3 16 1.7 2.6e+02 3.7 0.2 7 23 101 118 96 118 0.83

4 16 0.047 7.3 8.6 0.4 1 22 126 147 126 147 0.95

5 16 0.00017 0.027 16.2 6.2 1 23 155 177 155 177 0.98

6 16 4.4e-06 0.00069 21.2 2.3 1 23 183 205 183 205 0.97

7 16 1.4e-05 0.0021 19.7 0.6 1 23 211 233 211 233 0.96

8 16 8 1.2e+03 1.5 2.1 2 23 639 661 638 661 0.94

9 16 7.2 1.1e+03 1.7 2.0 1 23 685 707 685 707 0.90

10 16 0.021 3.2 9.7 0.8 1 23 715 739 715 739 0.96

11 16 0.023 3.6 9.5 5.6 2 23 744 765 743 766 0.94

12 16 0.00011 0.018 16.8 0.2 2 21 779 798 778 799 0.94

13 16 0.0012 0.18 13.6 0.3 1 23 807 829 807 829 0.97

14 16 1.3e-06 0.00021 22.9 1.4 1 23 835 857 835 857 0.99

15 16 6.3e-05 0.0097 17.6 1.4 1 23 863 885 863 885 0.98

16 16 0.00075 0.12 14.2 1.1 1 21 891 911 891 912 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.063	9.7	8.2	0.6	2	23	41	62	40	62	0.96
2	16	0.004	0.62	11.9	3.5	1	23	68	91	68	91	0.92
3	16	1.7	2.6e+02	3.7	0.2	7	23	101	118	96	118	0.83
4	16	0.047	7.3	8.6	0.4	1	22	126	147	126	147	0.95
5	16	0.00017	0.027	16.2	6.2	1	23	155	177	155	177	0.98
6	16	4.4e-06	0.00069	21.2	2.3	1	23	183	205	183	205	0.97
7	16	1.4e-05	0.0021	19.7	0.6	1	23	211	233	211	233	0.96
8	16	8	1.2e+03	1.5	2.1	2	23	639	661	638	661	0.94
9	16	7.2	1.1e+03	1.7	2.0	1	23	685	707	685	707	0.90
10	16	0.021	3.2	9.7	0.8	1	23	715	739	715	739	0.96
11	16	0.023	3.6	9.5	5.6	2	23	744	765	743	766	0.94
12	16	0.00011	0.018	16.8	0.2	2	21	779	798	778	799	0.94
13	16	0.0012	0.18	13.6	0.3	1	23	807	829	807	829	0.97
14	16	1.3e-06	0.00021	22.9	1.4	1	23	835	857	835	857	0.99
15	16	6.3e-05	0.0097	17.6	1.4	1	23	863	885	863	885	0.98
16	16	0.00075	0.12	14.2	1.1	1	21	891	911	891	912	0.94

Sequence Information

Coding Sequence: ATGTCCAGTTCAGACGCTGAACTCAACCCAGACTCTGAGATCGATGCTAAGACGCTGACTAAGTCCGCCAAATTATCATCTCAATTAGTGGAAATTACGACAGATGGTGTACCTAAATTGCATTGTCCTGTTTGCAGTAAGGGCTTATCCTCTCTCAATGGTTATGTCAATCATGTAAAAAAACATGAACCACCTGGTGGCTTCAATTGCCGTTACTGTGATGAACGCTTCTGCACAACGGAAGCGTTGAAACAGCATCGCGACGAGAAGCATATTACCATAGGTTGCCGCATATGTGCGGACACAACGTTCTCCAGTGAAAGTGCATATCGGGAACACATTACCAATGTGCATAATGGAATTGATCGTCAAATGTATAAGTGTGACAAATGTGACGCAGAATATAAAACTATCATACCATTTCATCGTCATATGGAAACACAATGTGGTACAATAAGACCACATAAATGTGAGCAGTGTTCGCATTCCTTCATCTCAAAATATAACCTGAAGCAGCATCAGTTGTCACATTCAGGTGAACATAATTTCTGCTGCAGCTATTGTGGCAAGAGTTTCAAACAAAAAGGTGGACTAGTAGAACACGAACGTTCCCATACTGGTGAAAAGCCGTACAAATgtgatGTTTGTGGAAAAGCGTTTGCTCATCGTGAAAGCTTGGTTACACATTCCTCCATACATACTGGCGTGCGTTTAGTAGAATGTAAATGTTGTCAAACAAGATTTTCGTGCTACTCAAATTTACTTAAACATCGACGTGCCCGTCCAGAAACATGTGGCTTACCTAAGTATGATTCCGCGAAAAGGCGTGGATACACTCATCGTGTAAGAAttCCACCAAATGCTAATCCAACATCAGAAATTAAAGTtcgtagtaaaaataaaatactgaaacCTGAAGAAAAAGCTAAGAATGATAAAATCGTTACTGACAGACAAACGAAGCATAAAAAGGTATCCACTAAAGGGAGAAAAAACTTGCAAAAAGACCGACATAAAAATTCCAAAGGAGATGTGGATGAAGTGGAGACAACTGCTGTCAGTCTTCGAGGTAGAAAGAGAAAAAAACGCAAAGCAGATACTACTGAAGAAAGCGTCAATGATACTAATTTagaatcagaaataaataattccatatTACAAAGTTCTAGTCTCAAGGAAAACGGTACATCAACGGAAATTACATTAATTGAAGTGAAACCCGTTTGGAACTACAGTGACAGTGAAGACGATTTTGAAATGTCTAATACGATATTTTCTGATGGTAGTGAACTAGAACATCCGCTTGATTTGCCAATAAAACAAGAAGATAACGAAGAAAATAGTTCCATACCTTACGAATGTTCTGATGAACAAGAATTCATAGATATAAGTGTTAAAGAAGAAGATGTTAATAGTATATTCAACCAAAAAGATAAGTTATTGGATTATCTGTTAAACGAAGATATGTCGGATATGGaagaagcaaaaaaatactcgacTATAAAATCAACGAAAGGAAATCGACAGAAAACAGATGTCATACTACAGGAGACTGAAATGATACTAGTAGACGACCCCATAAATTCTGTCATTGGACAAGATGTGCTTGACACAAACTATatgaaTGAGTGTAAAATTATGTTGGAAGATATAACAAAGCTTTACCCGCAACTTAAACAAGAGAATTGCATTAATATCAAAGACAATATAGTACAAACAAacgaaaatgttattatttccGAAGACAAGGAAGAAGATATTATTTCTGAACAGACTGATGTACCCATCAAAAAACGCCGGAAACGTGctattactgaaaataagacaGCCGCGGAACATAAACGTAGTGCAAAAATTACTACCAGAGAGCTGAAAGCACGTATGAGAATGTTGAAAAAGGACCAAAAAACTTGGCAATGCATGTATTGCATAAAAATGTATCATATGCGGAAACCATTTGAGAAGCATTTGCGTGAGAACCATAAGCGTCCAAAGGAAGAAGTGAGCGAAATATTTAAAGCAGATAATGTCTCTACAGTCACCGATGAAGTTTACAATTGCCGTTTCTGCAATAAAATGTACTTAGTGGAGAAGCGTTTAAAGTCACACGAAAAACTGCATGGTGAAAATGGCGAACTGATCTTTAAATGTCCATGTTATTGTACGATATACTTTGCTACTAAAGAGGAAGCAACAGCACATGCACAATCGGAACATCGGGAAATGCTTTATTGCGATCTTTGTAAAAGATTCTATACCGCACACGATAGTTTTAAGAATCACATGAGAAATCATCATTCGGGCAAAGTGCAACGTTGTTTGCAAAGAAATTTGGTTTGTGAAAAATGTGGCAAGAAATTTTCTGGTCGCACATCATTAACTGATCATGTACGTTCGGATTGTGGTCGCGTGCCACTCTATCCTTGTACGGTTTGTGGAAAACATTTAACCACAGCGGGTATATTAAAAACGCATATGCTTTTGCATAGCTCCGATTCACCATATCAATGCGAACAATGTGGAAAGACTTTTAAGGTTAAGGCACAGTATAATGTTCATTTGAAGAGACACACGGATGTAAAACCCTATAAGTGCCATCTTTGTCCTAAGGAGTATCCATACCGTGAAAGTTTGCTAACGCATATGACGATACACACTGGTATTAGACGTTTTATGTGTCAAGGCTGTGGTAAACGCTTCACTTGTATATCGAATCTCCAGGCTCATCGTAAAGTTTTTGCTGAAACTTGTGGTACCTTACCTTTAAACACAAAAGCAACGCACTATATGGGCGTgaaaaaaggaaatttgttgCTGGGCACTAAGCCGCAAGCAGGACTCGATTATGTTGAAACAAATACGCTTATTGCTAAAAACGTTATACGAGACATACCACCTTTACAACCAATCACCAATTTTTCAACATATGTTGAATCCGGCAAAACAGATATTCCTGCTGATAAAAATTGTGTACGTGATATTCCGCCTTTGCAACCCATCAGCACTTATTCAATGGCAACAACAAGTCCTACAAATAATTCgcaaacaaattcaaattatagtttattgaaCAAATTTGATGAATCGCATTCATCGTCATTTCAATGA
Protein Sequence: MSSSDAELNPDSEIDAKTLTKSAKLSSQLVEITTDGVPKLHCPVCSKGLSSLNGYVNHVKKHEPPGGFNCRYCDERFCTTEALKQHRDEKHITIGCRICADTTFSSESAYREHITNVHNGIDRQMYKCDKCDAEYKTIIPFHRHMETQCGTIRPHKCEQCSHSFISKYNLKQHQLSHSGEHNFCCSYCGKSFKQKGGLVEHERSHTGEKPYKCDVCGKAFAHRESLVTHSSIHTGVRLVECKCCQTRFSCYSNLLKHRRARPETCGLPKYDSAKRRGYTHRVRIPPNANPTSEIKVRSKNKILKPEEKAKNDKIVTDRQTKHKKVSTKGRKNLQKDRHKNSKGDVDEVETTAVSLRGRKRKKRKADTTEESVNDTNLESEINNSILQSSSLKENGTSTEITLIEVKPVWNYSDSEDDFEMSNTIFSDGSELEHPLDLPIKQEDNEENSSIPYECSDEQEFIDISVKEEDVNSIFNQKDKLLDYLLNEDMSDMEEAKKYSTIKSTKGNRQKTDVILQETEMILVDDPINSVIGQDVLDTNYMNECKIMLEDITKLYPQLKQENCINIKDNIVQTNENVIISEDKEEDIISEQTDVPIKKRRKRAITENKTAAEHKRSAKITTRELKARMRMLKKDQKTWQCMYCIKMYHMRKPFEKHLRENHKRPKEEVSEIFKADNVSTVTDEVYNCRFCNKMYLVEKRLKSHEKLHGENGELIFKCPCYCTIYFATKEEATAHAQSEHREMLYCDLCKRFYTAHDSFKNHMRNHHSGKVQRCLQRNLVCEKCGKKFSGRTSLTDHVRSDCGRVPLYPCTVCGKHLTTAGILKTHMLLHSSDSPYQCEQCGKTFKVKAQYNVHLKRHTDVKPYKCHLCPKEYPYRESLLTHMTIHTGIRRFMCQGCGKRFTCISNLQAHRKVFAETCGTLPLNTKATHYMGVKKGNLLLGTKPQAGLDYVETNTLIAKNVIRDIPPLQPITNFSTYVESGKTDIPADKNCVRDIPPLQPISTYSMATTSPTNNSQTNSNYSLLNKFDESHSSSFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -