Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: su(Hw)
Assembly: GCA_002237135.5
Location: CM026971.3:163157436-163161856[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00039 0.06 15.1 0.9 1 20 60 79 60 81 0.94

2 12 8.5e-05 0.013 17.2 0.4 3 23 132 153 130 153 0.93

3 12 0.0055 0.85 11.5 0.3 1 23 159 181 159 181 0.97

4 12 5.3e-06 0.00083 21.0 1.4 3 21 190 208 188 209 0.94

5 12 6.8e-06 0.001 20.6 0.8 2 23 221 242 220 242 0.97

6 12 0.00041 0.064 15.0 1.1 1 23 253 275 253 275 0.98

7 12 0.94 1.4e+02 4.5 6.6 1 23 280 302 280 302 0.97

8 12 1.4e-06 0.00021 22.8 0.3 1 23 308 330 308 330 0.98

9 12 0.00016 0.024 16.4 2.0 1 23 336 358 336 358 0.97

10 12 3.2e-05 0.0049 18.5 0.4 1 23 362 384 362 384 0.97

11 12 0.0018 0.28 13.0 0.2 1 22 399 420 399 423 0.91

12 12 0.00054 0.084 14.7 1.2 3 23 442 463 441 463 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00039	0.06	15.1	0.9	1	20	60	79	60	81	0.94
2	12	8.5e-05	0.013	17.2	0.4	3	23	132	153	130	153	0.93
3	12	0.0055	0.85	11.5	0.3	1	23	159	181	159	181	0.97
4	12	5.3e-06	0.00083	21.0	1.4	3	21	190	208	188	209	0.94
5	12	6.8e-06	0.001	20.6	0.8	2	23	221	242	220	242	0.97
6	12	0.00041	0.064	15.0	1.1	1	23	253	275	253	275	0.98
7	12	0.94	1.4e+02	4.5	6.6	1	23	280	302	280	302	0.97
8	12	1.4e-06	0.00021	22.8	0.3	1	23	308	330	308	330	0.98
9	12	0.00016	0.024	16.4	2.0	1	23	336	358	336	358	0.97
10	12	3.2e-05	0.0049	18.5	0.4	1	23	362	384	362	384	0.97
11	12	0.0018	0.28	13.0	0.2	1	22	399	420	399	423	0.91
12	12	0.00054	0.084	14.7	1.2	3	23	442	463	441	463	0.96

Sequence Information

Coding Sequence: atgagtcaCGACGTTTTAAAAACCGTTTCCATTAAAGACGAAGTAGGCCCAAACATTGGTTTTTCATTAACGGATAATGATATAGTGAAATCGGAGgacaaaatatctaatataaatgATAGGGACCATTTGAATACTGACGGTACAAAAGAAGCAGTTGAGGATCGTACTGAAAAACATAAATGCGACAATTGCTCTAAGTCATTTAAAGTATTTGGTATGCTTAAAAAACATTTAGCTGTGTGCTATTTGAATAGTAGTTATCACACTCGAAAAGCAGAAATGATAACAAACATACAGAAAATCGAAGAGGATGCGGTTAAACTAGAGCAGGAGAATATATGCTTTTGTTGCGGTGAAAGTTATGATACATTTCATCGtggaaaaataaattgctttgatTGTCCAAAATCCTTCAAAACTCAACTGAGTTACGAacgacatatttttataattcattcgGAATTCGATGAATTTCCTTGTTCTATTTGTAATGCAAAATTACGGACAGCTACCCTATTGAAGTTACACGAAAAGCAACACGCAAGTCTTGGAAGATTGTGGGCCTGCAAAATATGCGGCAGAGATTTCACTCGCAGTTTCCATTTAAAACGTCATCAAAAGTACACATCGTGCGCAGGAAGCTTAAAAAAAACCATCACTTGTAAAGTGTGTAATAAAGTGTTCTCTGGTGTAGATAGTTTGCGAAAACACTTAAAACGGCATTTTGCCACACAActtgcaaaaattaaagaatttatgtgccctatttgtaaaaatagttttccCAGTTTGTCGATTTTAAAaAAGCATAAACGTAGACATAAAGAAAAACGTTTTACTTGTGACTTTTGTGACAAGAAATTTCTGTCAGGGTGTCAATTGAAAGACCATCGCCATTCTCACACTGGCGAAACCCCTTATATatgcactgaatGCGAACAAGGTTTTACTCGTAAAGGAGCACTCAATGTTCATATGAAGCGACATAGTGGGGAAAAGCCACACGTTTGTTCCGAATGTGGAAAACGTTTTATGCTAGCATATCAGCTACGTTCCCACAGTAAAATGCATGTACGTCCTTTTGCTTGTGCTCAGTGTGAAGAGACATTTACAACTAATAAGAAGCTTGAGCAACATGTCAGAATTCATTTGTCTGAAAGCAAGTTGGCGAATGAGGCTCGAGAACAAAGATTCAAATGCACAGAATGCAAAGCAATTTATGCAACAGAAGAAGAACTTAAAACACATTATGATACAGAAGTTCATATacatAAATACACCAAAAACAGCTCCAAAAAtgtgaaagaaaaacaaagaaactgtacgctttgtaacaaaaaatttaatacagtgAAAGCTTTGAACTCTCACCTACTTAAGATACATAGAGAGCATCCACAGAATTTCCTCAGTGCTAAATGTACCCAAAACTTAAAACCAAATAATGTCGCCACGTCATCAGAAAAGCATTACAGAAGTGATAATTCCAACGAAAACCCTATTGAAAATGTTACTCCAACTGATAACAATGTTTTGCCATCACTAAAATATGAAGAACTTGCGTCAATAGGAAATGGAGTTATTAAACAAGAATGTATAGTAGATAAAAGAACTGAAACAAccacagaaaaattattattcaataacgaaaagaaaagtgaaaggATACAGCCGACACAtatgagtaataatgaaaaaatattcatcaatGATGAAGTTATTAtgcaacaatttataaaacaagaaGTACCCGATGCACCTGCAGAGAATTTGCTATTAGAAAGCGAAATGTACAATAATATGACAATAGaaaatgaaactataaaaactGAACCAGGATCTGCTGTTAATGAAACTCCAAACGGTACAATTATAAACGATCGAATACCTCTCGAATATGGCGGAGTTTCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGGAAATTGGTCATACATGGAGAATAAAATTCAAACCTAA
Protein Sequence: MSHDVLKTVSIKDEVGPNIGFSLTDNDIVKSEDKISNINDRDHLNTDGTKEAVEDRTEKHKCDNCSKSFKVFGMLKKHLAVCYLNSSYHTRKAEMITNIQKIEEDAVKLEQENICFCCGESYDTFHRGKINCFDCPKSFKTQLSYERHIFIIHSEFDEFPCSICNAKLRTATLLKLHEKQHASLGRLWACKICGRDFTRSFHLKRHQKYTSCAGSLKKTITCKVCNKVFSGVDSLRKHLKRHFATQLAKIKEFMCPICKNSFPSLSILKKHKRRHKEKRFTCDFCDKKFLSGCQLKDHRHSHTGETPYICTECEQGFTRKGALNVHMKRHSGEKPHVCSECGKRFMLAYQLRSHSKMHVRPFACAQCEETFTTNKKLEQHVRIHLSESKLANEAREQRFKCTECKAIYATEEELKTHYDTEVHIHKYTKNSSKNVKEKQRNCTLCNKKFNTVKALNSHLLKIHREHPQNFLSAKCTQNLKPNNVATSSEKHYRSDNSNENPIENVTPTDNNVLPSLKYEELASIGNGVIKQECIVDKRTETTTEKLLFNNEKKSERIQPTHMSNNEKIFINDEVIMQQFIKQEVPDAPAENLLLESEMYNNMTIENETIKTEPGSAVNETPNGTIINDRIPLEYGGVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGNWSYMENKIQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01405101;
90% Identity: iTF_01405101;
80% Identity: -