Tdal003042.1
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- Zfy1
- Assembly
- GCA_002237135.5
- Location
- CM026970.3:49704708-49708719[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.2e-05 0.0065 18.2 0.7 1 23 127 149 127 149 0.96 2 11 5.8e-06 0.0009 20.9 4.6 1 23 155 178 155 178 0.97 3 11 1.3e-05 0.002 19.8 0.3 1 23 184 206 184 206 0.98 4 11 2.3e-06 0.00036 22.1 1.1 1 23 212 234 212 235 0.96 5 11 8.8e-07 0.00014 23.4 0.5 1 23 242 264 242 264 0.98 6 11 0.0093 1.4 10.8 1.1 1 23 270 293 270 293 0.94 7 11 0.2 30 6.6 0.1 1 23 299 320 299 320 0.91 8 11 3.6e-05 0.0056 18.3 4.5 1 23 326 348 326 348 0.97 9 11 5.9e-06 0.00092 20.8 0.3 1 23 354 376 354 376 0.99 10 11 0.017 2.7 9.9 2.6 2 23 383 407 382 408 0.91 11 11 0.00042 0.064 15.0 0.8 1 21 413 433 413 434 0.94
Sequence Information
- Coding Sequence
- atggTACGTAGTCGCCGTTCCATATCGAAAGATTATGCCTCATCGTTGCTGGGTGACAGTGGCATATCACTTTCGTCTCCGCCAGCGGCACGTTTAATTCTAGATGAGAAAGAGGAGGAAGCTATTATAGAACAGCTATGTGTCActgatgatgaagatgatgatgCCAATGATATTGATTATAATCCCATTTGTGATGATACCAACTCACAAAAGTCTGATAATGATCAAGTTTCACCGAGTTCATCGCTGGAAGATGAAACTGAAGCAAAACTTGAATTATCTATATCGTCGTCATTATCTACATTGAGAACATCTTCTATACGAAAATCAACTAGCAAACAATCAGGAGTAGTAGCCAAAAAATCTCGCATTTCGCACATTTGTCAAATTTGTCAGAAGGAATTTGGTGGTAAAACTGATCTTAAACGTCATATACTCATTCACAGTAATGAACGTCCACACAAATGTGAACAGTGTAGCAAATGCTTTCGTCAGGCTGTCAATTTAAAGAATCACATAACGACCGTACATGAGGATAAACGCCAATTTCCATGCCAGTTGTGCCCGAAATCGTTTGCGCTTAAAGAGCGTTTGCGTCTACATATGCGTATACATTCGGGAGAGAAACCATACGTCTGCAATTTGTGTGATAAGAGTTTTGCCAGAGGTGGGCAGTTAAAACAACATCAAATATCACATCATAAGAACAGTATTAAGAAGTTCGTTTGTAACAAGTGTTCCGCGAGTTTTTCATCACCTACTAACTTGCGTGTACATATGGAACGGCATGAACAGGGTCCTGatcatttttgtgaaatttgcaAAGAACACTTTCCTAATGATGTCGTCTTGCGTGctcatattaaaaatgtacacTTTAAACTGAACCAATTTGATTGTGATGTGTGTAAAGAGACTATCGAGGATGGTGATTTGATTACGCATAtgaaaactcataaaaatatcAAGACTCATATATGCGGAGTGTGCAATTCATGCTTTACACAAAAGTCTCAATATAATGTTCATATGCGAATGCATACTGGAGAACGTCCTTATCAGTGTCAAATATGTTGGCAAACATTTGCTTACTCCAGCGTACTCAAATTGCATATTCGTGTCCATACTGGTGAAAAGCCATTCCTGTGTCAAATATGTAAAGATGAATTGGGCTTTTCACAATTGGCTCATCTGAAAACACACATGAAAAGGATACATCATCAGGATAAAGCGTATATGTGTACtacttgcaataaattttttaaaattaaggcTGAATTACAATCCCATGTACAGAAAtgtaacaaaagtaaaaatgtgACGGAAGAAAGAGATACCACCGATGAGGATATGCAAACATTGTCGCACATGCGTTTCTTGGTAGCTTATCTATACAAAAAGATATCATCCAAACAGCGATTACAGCAATTGGGTTTTGAGAAGCGTCTAATTGATAATGTTCTAATAGCATCGCTTAAACTGGCTAATCGTAAAGTATGCGATGATCAGAATCTATCAGCAATCGCACGTTTACGTTTAAACGTTGAGGAGTTTCTTAATTGGATTGTGCCAGCCAAACCAATGGAGCATTTGCGCAAAGAGCAGCTATCGGTTGAAAGTACTTTAGATAAAATCGCAACGATGtatatgaaacaaaaatga
- Protein Sequence
- MVRSRRSISKDYASSLLGDSGISLSSPPAARLILDEKEEEAIIEQLCVTDDEDDDANDIDYNPICDDTNSQKSDNDQVSPSSSLEDETEAKLELSISSSLSTLRTSSIRKSTSKQSGVVAKKSRISHICQICQKEFGGKTDLKRHILIHSNERPHKCEQCSKCFRQAVNLKNHITTVHEDKRQFPCQLCPKSFALKERLRLHMRIHSGEKPYVCNLCDKSFARGGQLKQHQISHHKNSIKKFVCNKCSASFSSPTNLRVHMERHEQGPDHFCEICKEHFPNDVVLRAHIKNVHFKLNQFDCDVCKETIEDGDLITHMKTHKNIKTHICGVCNSCFTQKSQYNVHMRMHTGERPYQCQICWQTFAYSSVLKLHIRVHTGEKPFLCQICKDELGFSQLAHLKTHMKRIHHQDKAYMCTTCNKFFKIKAELQSHVQKCNKSKNVTEERDTTDEDMQTLSHMRFLVAYLYKKISSKQRLQQLGFEKRLIDNVLIASLKLANRKVCDDQNLSAIARLRLNVEEFLNWIVPAKPMEHLRKEQLSVESTLDKIATMYMKQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -