Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: -
Assembly: GCA_002237135.5
Location: CM026970.3:127938784-127940926[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00058 0.089 14.6 1.5 1 23 128 151 128 151 0.97

2 11 8.4e-05 0.013 17.2 1.7 1 23 170 193 170 193 0.97

3 11 1e-05 0.0016 20.1 0.6 1 23 349 372 349 372 0.98

4 11 6.9e-05 0.011 17.5 3.6 1 23 393 415 393 416 0.96

5 11 0.00021 0.032 16.0 2.3 1 23 425 447 425 447 0.97

6 11 3.2e-06 0.00049 21.7 0.5 2 23 451 472 450 472 0.97

7 11 8.2e-05 0.013 17.2 2.3 1 23 478 500 478 500 0.98

8 11 0.0011 0.17 13.7 1.4 3 23 508 527 506 527 0.97

9 11 0.00045 0.07 14.9 3.3 2 23 534 555 534 555 0.96

10 11 1.9e-05 0.0029 19.2 1.0 1 23 561 583 561 583 0.98

11 11 8.7e-08 1.3e-05 26.6 0.3 1 23 589 611 589 611 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00058	0.089	14.6	1.5	1	23	128	151	128	151	0.97
2	11	8.4e-05	0.013	17.2	1.7	1	23	170	193	170	193	0.97
3	11	1e-05	0.0016	20.1	0.6	1	23	349	372	349	372	0.98
4	11	6.9e-05	0.011	17.5	3.6	1	23	393	415	393	416	0.96
5	11	0.00021	0.032	16.0	2.3	1	23	425	447	425	447	0.97
6	11	3.2e-06	0.00049	21.7	0.5	2	23	451	472	450	472	0.97
7	11	8.2e-05	0.013	17.2	2.3	1	23	478	500	478	500	0.98
8	11	0.0011	0.17	13.7	1.4	3	23	508	527	506	527	0.97
9	11	0.00045	0.07	14.9	3.3	2	23	534	555	534	555	0.96
10	11	1.9e-05	0.0029	19.2	1.0	1	23	561	583	561	583	0.98
11	11	8.7e-08	1.3e-05	26.6	0.3	1	23	589	611	589	611	0.97

Sequence Information

Coding Sequence: atgcttaaaataatttcaaatgatcCAAACAGGTCGGATAATGTTAAATGTGGAGAAATCTTTTGGCATGCGGATACGGCCTACAAGGCAACTTGCTTTTTTTGTGGAGAACATTTGTTGTTTGACGATTTTCCCAAACACTTTCAGGAACATCATATTGATTCAAATAGAATATTTACAGAGACATTGAAagatttaaatgcaattaaattaaatgaagttgAGGATGAAAATATAAGAGATAAGTCCACTGAACTTCTGTGTGAAAAATCAACGCCGGAAAACGATGAAGTCAACTTCGAAAGCAGCACTAACGCAATTCAAAATTCAACGAcgaaaaaaactAAGAAACAAAAGAATGATAATTCATATACTCCAGATTATCCTTGTAAGCTGTGCTCGCGTGTATATAAACGCATAGCTTGTTTAAACCAACATATACTTTCCACTCACAGTGGACACAAAGAATTTTTGAATAATGATACCCCCGATATGATTGATTTGCCGTTCCAATGTTTACTATGTCCACGTGCCTATTcacataaaaagaatttattaactcACGTGCAAATGAATCATCCGCCACAAAGTTTGTTAAGTTCAAATAGTCAGAATTCGCAGGAAGATCATATTTCTAAAGAAACAGATATTTTTGTACAAGCTTTGCAGgaaataaatacagttaatgaagttaaaattgaaaacacaaaatttgaatcCACTGATGATTTGTGTGGAAAATCAACAGAAAATGCAGTTGAAGAAATAGAGGATGAAAAACTGATAAACATTGAAGACTTACAAAGCAGTCaaggtgcaatattaaaaacttcagTCTTAGAAGGTGCAGTATTAAATGATCATAAAGAATTCATACCAGAAGATAAGGAAGATGAAAAGCCAAACTTAGATGTGTCAGAAGAGAGTAGTGATTGGAAATGTGATGATGATGACAATGATGATTGGAGTGATCACTCTAGTTTGCCACcattaaagaaaaaaaaaacaaaacaaagtgaTACGATTGGAAAGGATATAGGAGATTATCCATGTAAGTTATGTCCCCGTACATACAAgagattaatatatttaaatcagcATATACGAGTTAATCACACGGAGGGAAAAGAATTAAagaaCGATGATAAACCAAATATTGAAGTCGATAATTTGCCTTTCCAATGTGCACAATGTCCTCGTTCCTACAGACACAAAAAGAGCTTATTAGGTCATATACGTATCCACCATACCTCAAAACTTGTTAAAGAATTGCATAAATGCGAAGAATGTGGAGAGGTGTTTCGAGAAAAACGTTACTTAGACACGCATTTGTTTAAGCATAAAGGTCTTACTTGTGAAGTATGTGGCAGAAAATTTACACAAGTTGGTAATTTACAATTGCATTTAAAACGGCATACAGGCGTAAAAGAATTCAAATGTGAAGAATGTGGTAAAATGTTTTTCACAGAGCATGAGAGAAATAATCATATGGTAATGCATACCCAGCATTTTCCAAGTATTTGTGAAATATGTGGAAAACCTTGTCGTGATGGAAAACTTAAATCACATATGCGTAGGCATACTGGCGAACGACCAGCAAAATGTGAAGTGTGCGGTAAATGTTTCTTCGACACCCATGATCTGAACGTACATGCGACTTCACACAGTGATGAACGACCATTTCCATGTGATATATGTGGTTCTGCGTTTAGACATAAAAAAGCTTTACGTGTGCATAAGAAAATCCACAACAAAGATCgtaaacatatatgtaaaatatgtggGAAGTCATATGCACAAGCGGGAGGATTAACTGCACATATGCGAACCCATAATACGGCCATTAAAGATGATATCACGACAGTTTTGGATGAAATTGAAATGCTTTAA
Protein Sequence: MLKIISNDPNRSDNVKCGEIFWHADTAYKATCFFCGEHLLFDDFPKHFQEHHIDSNRIFTETLKDLNAIKLNEVEDENIRDKSTELLCEKSTPENDEVNFESSTNAIQNSTTKKTKKQKNDNSYTPDYPCKLCSRVYKRIACLNQHILSTHSGHKEFLNNDTPDMIDLPFQCLLCPRAYSHKKNLLTHVQMNHPPQSLLSSNSQNSQEDHISKETDIFVQALQEINTVNEVKIENTKFESTDDLCGKSTENAVEEIEDEKLINIEDLQSSQGAILKTSVLEGAVLNDHKEFIPEDKEDEKPNLDVSEESSDWKCDDDDNDDWSDHSSLPPLKKKKTKQSDTIGKDIGDYPCKLCPRTYKRLIYLNQHIRVNHTEGKELKNDDKPNIEVDNLPFQCAQCPRSYRHKKSLLGHIRIHHTSKLVKELHKCEECGEVFREKRYLDTHLFKHKGLTCEVCGRKFTQVGNLQLHLKRHTGVKEFKCEECGKMFFTEHERNNHMVMHTQHFPSICEICGKPCRDGKLKSHMRRHTGERPAKCEVCGKCFFDTHDLNVHATSHSDERPFPCDICGSAFRHKKALRVHKKIHNKDRKHICKICGKSYAQAGGLTAHMRTHNTAIKDDITTVLDEIEML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -