Basic Information

Gene Symbol
hang
Assembly
GCA_002237135.5
Location
CM026970.3:160408773-160416052[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.06 9.3 8.2 1.3 3 23 312 333 311 333 0.93
2 19 0.078 12 7.9 3.4 3 22 434 453 432 453 0.90
3 19 0.011 1.8 10.5 1.6 1 22 528 549 528 551 0.90
4 19 3.6 5.6e+02 2.6 1.6 2 23 591 613 590 613 0.88
5 19 0.0012 0.19 13.5 0.2 3 23 666 687 665 687 0.96
6 19 5.8e-06 0.0009 20.9 0.2 1 23 695 718 695 718 0.96
7 19 1.7e-05 0.0026 19.4 0.1 2 23 805 826 804 826 0.97
8 19 0.045 7 8.6 2.9 2 23 888 910 887 910 0.94
9 19 0.0059 0.92 11.4 0.6 2 23 919 941 918 942 0.95
10 19 0.006 0.94 11.4 0.0 1 23 954 977 954 977 0.98
11 19 0.00013 0.02 16.6 1.1 1 23 1036 1058 1036 1058 0.99
12 19 0.002 0.31 12.9 0.9 1 23 1066 1089 1066 1089 0.96
13 19 0.0099 1.5 10.7 0.2 2 20 1097 1115 1096 1115 0.96
14 19 7.2e-06 0.0011 20.6 0.5 3 23 1178 1198 1177 1198 0.98
15 19 9.8e-05 0.015 17.0 0.7 1 23 1233 1255 1233 1255 0.97
16 19 0.00034 0.052 15.3 0.8 2 23 1307 1329 1306 1329 0.92
17 19 0.64 1e+02 5.0 1.5 2 20 1349 1367 1348 1369 0.90
18 19 0.046 7.1 8.6 0.7 3 23 1384 1404 1384 1404 0.98
19 19 0.0017 0.26 13.1 2.0 1 23 1631 1653 1631 1653 0.97

Sequence Information

Coding Sequence
ATGCGGTTTTCTGTGATTGGAGTTAATGCAGTGGATCCACTTTTCATCACCATTCCATTTAGGCATTTGCTGCTTGTGTCACCCCAATCATTCTGCAATTTATTCTGGCGGTTGACACAAATTTTGataaCATCTTATGATCGCCTCTCGCTGCGTATATGTCACGCCTGCATTAGCTATTTGAACTCTTGGCAGAGTTTTAAAAATCGTTGCCTTACATCTCAGAAAAAACAACGCAGTTGGGTAGATAATAACTTAAGCATAACAACAACACCAGCTGATAATACGCAAGATGAATATCAAGAACAAAGTAGCTTGGCATCATCAATATTGGATGGAATTACCACGTTAAAGAAGCGAAAATCTTTAACAGTTTATGTGAGTCCTAAGAAacgtcaacaacaacaatctgtgcagcaacaacaaaagcagcataaattaataaaactcttaaCACAACCATTTAAATCCAAAGCACATCATGCATTCCAACAACAATTGCTAATGAAATCTCAGcaacaatttaaaactaaaataaaacgtaaaaagCAACAGAAAATGTTGCTACCACAATTGCCGCAATTACCTGTACTATCGCAGTTATCAGATCTAACAAGTCTTAGCCCGTTGCCTCAACAGCAACCAACGGCAACAGAGGTTGCTACAACAACCTCTTCAAATGCTGCACAGCAATTGCGTTTGTTTAGACGATACTCCTATAATCCTTTACCTGCAGTACAAATTAAGGAAGAACCAACGGATAATGATGACGACTATAGTATGAAGCATCATGATGAATCTGATGATATTGTTGACCCAACAATGTTTTTGGAACGCACACAAGAAGAGGAGGAGGAGCCAATAatgGAACCTCCACATTATAGTTTTTCAAGTGATCAACCTTCTGTTATAAGTGATGTCAAAGAAGCATCCTGCCGTGCGTGCAACTTAAAATTTTCTACGCGTGCAAATGCACGTCGTCATGAACGTAACTTGCATCCCAACCTTTTTGAATTTGGTCCGGCTTCTGCTAATAGTACACCAATTACTAGACCTACAGCAGCTCTTGCCGCTGCATTAGAGTTGCGTCGTACTAATCAAAATTCTAACGCTGCCGACACATCTTCGTTACTGTCACAACAAAAATATCGTCAATTAGTTGTGAATGCTTTCAATCAAGGCGAGGCGGGTGGTTATGATTATGACAGTCCAGAAAAGTATCAGCAATTACTAACTGACGAGAAAATAGTGTTTCTACAACAGAATGAGGACTTTTTGTCACAATATCAAAATATGACTTGTCGTTGCTGCAACAGAAGTTATACTACTTACAAGAATTTTATGGCTCATATGCGTAAAAAGTATGCGACGCTGCCACGGAACTTATGTTTCAATTGCTTGAAATTGAATGATTCGAAGGCGCATTTCATATCACATTTGAAGCGTCGCAATTGCATTAATTTGTATAGAATTTTGCATTCCCTTATGTTGAAGGATCAAACGTTTGCTGCTGCCGTTAAAGCGACAAGTGCCGCTGTACCTGAAAAATTGCGAGCTAAGGAGCTGCTCGTCAATAAAATGTACGAATGTAAATTGTGTTCAAAGAGTTTTCGTCTTAAATTGGAGTTTCGTACACATGTTTATGATGATCATGCTGATGCACAAAAGAGGGATACTGGTTCCAAGCAGTGCAGTTTCTGTTCAGTCGAACTGGAAGATCCGGCTGAGCGTAAGCGGCACAATAACAATATGGATTGTATCGCTTCACTTCGTTGCGTCACTTGTGATGCCAAATTCGACAAGCATCAACAGTTTTTGGATCATGTCTATGAGAAGCATTTAGCTGGCTTTGGTGAGCAAAATAATGCTCAACCACAAGTAATAAGTGGATTAGAAAATGTACCGGCTAAAAAGTCAATAACGGgCTCTATAACAGAAGATTCTCGTGGTGGAAATCAACCGAAGACTCAATATTTCTCACGTATGCCGCAGGCTTGTCCAATATGCGGCCAGCAgtacaataattacaataatgttTTGCGACACATGGAATCCAAGCACCCAGATCAATTACCTCAAACTTATAAATGCGTTAAGTGCGGAACTGGATTTCCACGACTGTCTAATTTGCGTGAACATATGATTAACGCACACGCTGCTGAGTCCATTAAGCACACTGGTTTTGAGTACATAGTCAATGCCGATGCTGTAAAAATTTCAGGAGGTAACAACAATTCAAATGTGTATACTGGACGCTATGATTATGTTATGAAGGATTTGATGTCAATAACAAATGGTGGTACAACTGAAGACGGTGAAAATGAGCAAGCCGCAAAGAAAATTCGTTTAGATACTTCAGTTAACATCAAAAATAATGGCACTCCTGacaataaagtttataatagcTCAAAAGAATGTCCAATATGCAATGCcgtttttagtaataatattggACTCTCCAACCACATGCGTTCACACACTGCGGCAGCTCAAAATGCAGCGGCGGCAGCTAATTCCGCCAAGAATGCACAGCGACCTTTAAGCATAACAGCTGCGCCTAAGACAAATGCAACTGCTGCTCAAAATACACAGGGTGTTAGAGAACAGGCCATATTTAGACGTAGTCTTGAACAAGCAGCAGATCGTCGTTTCCGCCGTATGCGTTGTCGTATATGTCAACGTCGCTTTTCGTCAAAGAAATCTTACCGTTTTCATATGCTCAACGATCATCAGATACGCAATGTACAGTTTATAAAGTGTAAGATATGTGAAGCAGAGTTTGCTTATGAAAAAGGCCTAAAAGTACATATGTTCAAAATACACCACACTTTGCTACGGAATGAGATGATTGTGAAGCAATATGAGTGCGACATATGTTCAATTGTTTATCCCGCCGAAGAACAGTTGTTGCAACATAAGCGTACTGTGCACGGTAATGAGAATGCGCAATCAACAGATTTTGCTGATGGAGCTGTAGGTGACACAAGCTCGTTAGGTGCAGATCATTCAGGTATATCAACTCCTGTTAGTGGAGCAAGCATTGCTGGCGGTGAACGTAACACTACAGATCAAGCAGCAGCAGCACCGACTGGACCACTTTACTGGtatcaatgtaaatattgtccttctaatttcaatacaaataaaaaactagcTATTCATATCAACTCTCATGACGAGTTTGATTCAAAGGACTATTCATGTAAGGATTGTGGAAATGTTTATAGTGGCCGTAAAAGTTTATGGGTTCATCGTTACAAAAAACATCCCCAAATTGCTCAGCCTTCAGAATGTACTATGTGCAGGAAGGTCTTCTTCGATAGTCAAATGCTCGAAAATCATATACCAACGTGTAATCGCATACAAGTCCCTGGCACAGTGGATAGTTTGAATACACCAGTTTATAGACATAAGACTGGTGACGATGAAGATATTTCACGGGAAGGCGCTGACCTATCTACTACTATTGGAACAGGTAATGATGAAGTTTCAACAATGACAACAGGAAAAATTCGTCTACCAGAAGTGGCATGCACAATATGTGGACAACGGTTCACCGACCAGGAACTTTTCACTAAACATATTCAAATGCACGAACAAGAATTATATACAGACAATCCATTGGCTGCAATGTTTGATACTGGTCCAGCTGATCCGAATCAGTTTTATTTAGATCGAGTAAACGATAATGGCGAATACGCCTGCGATTTGTGTCaaaaaacattcacacaaatgACTGCACTTAAAGTGCATCGAAAATGGCATTTCAGAGGTGATAGCAAACAGaaCCAAGTAGAGTCCGATGCGAATACATTGCAGACCCAGACCAACCATCCACATCTACTGGGATTACAAGCAGTGGGACTTATGCCCAATCCTCGCCCATCTTCAAAATCCCAGAAGCACAAACGCGAActtaaatgtgaatattgttCTTCGACTTTTATAAGCAATAACAACCTAAGGcgacatatatatgaattacataAGGATGAAATATCCAATTTACCTCAACCGCCCAAAATTGAAACTGATAAGTACTTGCACTGTCGTCGGTgtgattttaagttttctacCAAATTTGATTGGATTGAACATAAATTGAGTGAAGCGCGTGTTATGAAACCATACGGACCCTTCCAATGGGGTTGTGATTTATGTGGAGCATATGTGTCACGTAAAGAGAAACTCATCCATCATATAAGCAACCATCTTAAGGAAAGTGTAATTGTCCCCATAGAGCAGCAGAAGCAAGAAATGAAAAATCAGAAGAATCAAAATGCAGACGAAGAGAATGCACACCATAGTGATAATGATAAACATCTTGATAATAGTGAGTATggtcaagaagaagaatcaatgGAGAATGATATTGAACAAGATGAGCAAGCGGAAAGCGATGATGATGACAATGAGACGACTGAGGAAGGTGATCCTGATGGTGATGAAGATGACAACGGTAGTGTACGTGAATATGATGAAGAAATGGATGAAAATAATggaaacaatgaaaataatagcgatgatgatgacgatgacgaagatgatgatGAGGATGTCCAGACAGATCATGATTACGTTATTCAAAATGAAGaagttgataaaaataatagaaactcTCAACAGTTAGCTccgaaattaattataaagactAATCGCACTGTAGATGATACAACTGAAGCTGAGGATTCGCCATCATATAtagatgatgatgacgatgaagATGAAGATGGTGATGGGGACGGTGACGGTGATGGTGATAGAGATGGAGATGGTGATGGTGAGGGAGATGGAGATGTTGATCATGATGGTGATGGAGACGCTATGGATACTGATTCAGATGATAGTAGCTCTTCAATTGGTGagacaaatacaaacaaaagtaAATCACATTCATGTGATTTATGTCAAGTATATTTTGAGTCACAACAAGAGCTTCAGAAGCATGTAAAGACACACTTTCTAAATGGGCCGATTACTTTCGGTGCTGTGAATTCAAGACCGAAAAACGCAAGTCGTAGCAGCACTAGTAGTGACGCTTATGAAATGTCatcataa
Protein Sequence
MRFSVIGVNAVDPLFITIPFRHLLLVSPQSFCNLFWRLTQILITSYDRLSLRICHACISYLNSWQSFKNRCLTSQKKQRSWVDNNLSITTTPADNTQDEYQEQSSLASSILDGITTLKKRKSLTVYVSPKKRQQQQSVQQQQKQHKLIKLLTQPFKSKAHHAFQQQLLMKSQQQFKTKIKRKKQQKMLLPQLPQLPVLSQLSDLTSLSPLPQQQPTATEVATTTSSNAAQQLRLFRRYSYNPLPAVQIKEEPTDNDDDYSMKHHDESDDIVDPTMFLERTQEEEEEPIMEPPHYSFSSDQPSVISDVKEASCRACNLKFSTRANARRHERNLHPNLFEFGPASANSTPITRPTAALAAALELRRTNQNSNAADTSSLLSQQKYRQLVVNAFNQGEAGGYDYDSPEKYQQLLTDEKIVFLQQNEDFLSQYQNMTCRCCNRSYTTYKNFMAHMRKKYATLPRNLCFNCLKLNDSKAHFISHLKRRNCINLYRILHSLMLKDQTFAAAVKATSAAVPEKLRAKELLVNKMYECKLCSKSFRLKLEFRTHVYDDHADAQKRDTGSKQCSFCSVELEDPAERKRHNNNMDCIASLRCVTCDAKFDKHQQFLDHVYEKHLAGFGEQNNAQPQVISGLENVPAKKSITGSITEDSRGGNQPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGTGFPRLSNLREHMINAHAAESIKHTGFEYIVNADAVKISGGNNNSNVYTGRYDYVMKDLMSITNGGTTEDGENEQAAKKIRLDTSVNIKNNGTPDNKVYNSSKECPICNAVFSNNIGLSNHMRSHTAAAQNAAAAANSAKNAQRPLSITAAPKTNATAAQNTQGVREQAIFRRSLEQAADRRFRRMRCRICQRRFSSKKSYRFHMLNDHQIRNVQFIKCKICEAEFAYEKGLKVHMFKIHHTLLRNEMIVKQYECDICSIVYPAEEQLLQHKRTVHGNENAQSTDFADGAVGDTSSLGADHSGISTPVSGASIAGGERNTTDQAAAAPTGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIAQPSECTMCRKVFFDSQMLENHIPTCNRIQVPGTVDSLNTPVYRHKTGDDEDISREGADLSTTIGTGNDEVSTMTTGKIRLPEVACTICGQRFTDQELFTKHIQMHEQELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYACDLCQKTFTQMTALKVHRKWHFRGDSKQNQVESDANTLQTQTNHPHLLGLQAVGLMPNPRPSSKSQKHKRELKCEYCSSTFISNNNLRRHIYELHKDEISNLPQPPKIETDKYLHCRRCDFKFSTKFDWIEHKLSEARVMKPYGPFQWGCDLCGAYVSRKEKLIHHISNHLKESVIVPIEQQKQEMKNQKNQNADEENAHHSDNDKHLDNSEYGQEEESMENDIEQDEQAESDDDDNETTEEGDPDGDEDDNGSVREYDEEMDENNGNNENNSDDDDDDEDDDEDVQTDHDYVIQNEEVDKNNRNSQQLAPKLIIKTNRTVDDTTEAEDSPSYIDDDDDEDEDGDGDGDGDGDRDGDGDGEGDGDVDHDGDGDAMDTDSDDSSSSIGETNTNKSKSHSCDLCQVYFESQQELQKHVKTHFLNGPITFGAVNSRPKNASRSSTSSDAYEMSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-