Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: ZIPIC
Assembly: GCA_002237135.5
Location: CM026971.3:110381540-110388715[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00045 0.069 14.9 2.6 3 23 155 175 153 175 0.97

2 12 1.3e-05 0.002 19.8 1.6 1 23 181 203 181 203 0.97

3 12 1.7e-05 0.0026 19.4 2.7 1 23 209 231 209 231 0.98

4 12 1.1e-05 0.0016 20.0 1.4 2 23 239 260 238 260 0.97

5 12 5.9e-06 0.00091 20.8 0.9 1 23 266 288 266 288 0.97

6 12 0.00034 0.052 15.3 2.0 1 19 299 317 299 317 0.98

7 12 0.00027 0.041 15.6 2.4 2 23 400 421 399 421 0.97

8 12 6.6e-06 0.001 20.7 2.5 1 23 427 449 427 449 0.98

9 12 9.5e-06 0.0015 20.2 2.5 1 23 455 477 455 477 0.98

10 12 1.4e-06 0.00022 22.8 2.4 1 23 484 506 484 506 0.98

11 12 1.5e-05 0.0023 19.6 0.2 1 23 512 534 512 534 0.96

12 12 0.002 0.31 12.9 4.6 1 19 545 563 545 565 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00045	0.069	14.9	2.6	3	23	155	175	153	175	0.97
2	12	1.3e-05	0.002	19.8	1.6	1	23	181	203	181	203	0.97
3	12	1.7e-05	0.0026	19.4	2.7	1	23	209	231	209	231	0.98
4	12	1.1e-05	0.0016	20.0	1.4	2	23	239	260	238	260	0.97
5	12	5.9e-06	0.00091	20.8	0.9	1	23	266	288	266	288	0.97
6	12	0.00034	0.052	15.3	2.0	1	19	299	317	299	317	0.98
7	12	0.00027	0.041	15.6	2.4	2	23	400	421	399	421	0.97
8	12	6.6e-06	0.001	20.7	2.5	1	23	427	449	427	449	0.98
9	12	9.5e-06	0.0015	20.2	2.5	1	23	455	477	455	477	0.98
10	12	1.4e-06	0.00022	22.8	2.4	1	23	484	506	484	506	0.98
11	12	1.5e-05	0.0023	19.6	0.2	1	23	512	534	512	534	0.96
12	12	0.002	0.31	12.9	4.6	1	19	545	563	545	565	0.98

Sequence Information

Coding Sequence: ATGCCTGGGTGTTGTTTATGTGGAAATGACTTTAAAATAGGATTCAAAATTTTCGAGGTACGCTTTGGACAACCACCTGTAGTAATTCATGATATAGTAATTGAATGCATTGGTCCAAGttataaaGATGATGACTCAAATAAAAGCGACAACGACACAAGAAGTGAAATTCAATCATTCTCAGAAGTTAAACTTGatgaaaattatagtaatttttccccagttatgaaaaaagaaataattgatgAGAAATACATTGattttcatACAGATCTGGGTCTCAACGACTTTGATTTTGATAACAAATCTGAAAGTGAATGTATTGATAGTTTGGACATTAGCAATGCTAAAAAAACGGAAACAGatggaaaaaaaactataaatgagAGTCTAAACAGTAATAAAACAGCACATAAGCCTGTAAAGAAACGGACGAAAACTGCTTACAAGTTTGGTTCTATATGTGACCAGTGTGGGAAAACTTTTCATTCATACACTGGTTTTATTTATCATCGTCGAACACATGATCCAGTAAAACATTTTAAGTGCAGCATTTGCGGCGAAAGTTATCGCAACAAGTTTCGTCTTAAATTGCACATGGCTTATCACACGGGTGAAACTCCATTCGAGTGCGATATTTGTAGTAAACGATTTGTTcacaaaattggtttaaataaacacaaacaaacGCATGATGAACGATCACGACGAGTAGAATGTGAACAATGCGGGTTTAAAGTGCGTTCAAAGTCACATTTACTTCGACATATGATTACGCATACAGGAGCAAGACCTTTTCCTTGCCCAGTGTGTGACAAATGCTTTGCCACAAATTACGGTATGAAATTACATCTGAAAGAACATCAAAATCCAGGCAGCACTAGACAGCAAAGATATCGATGTAAAAAATGTCCACGaacttttacaaatataaaaaattatgaaaaacattGTGAGCAAAACGATTGCATTCAAGTAACAAACGATAATACAAATGAACAGTGTTACGAAAATCAAGTGACGAATAAAAattttgaaGCAGAACTTGATCAATGTGATAAAAAGTCGGAAAGTGAATGTATTGGTAGATTGGACATTAGCAATCCAAAAGAAATGGAaactaaagaaaagaaaagtataAATGAAAGTCTGAATAATAAGAAACCCACTCATAAACCGGCAAAGAAATTCGGTTCTGTTTGTGATCAGTGTGGGAAATCTTTTCATTCATACACTGGTTTTATTTATCATCGTCGAACACATGAtccaataaaacattttaagtgtAAAATTTGCGGTGAAAGCTACCGCGCCAAATATCATCTCAAATTGCATATGGCTTATCACACCGGTGAAACCCCATTTGAGTGCGAGATATGTAGTAAACGATTTGTACACAAAATTGCTTTAAACAAACACAAACAGACACATGATGAACAACACCGGCGATTTGAATGTGAACAATGTGGACTTAAGCTACGCTCAAAGTCTCATTTGCGTAGGCACATGATTACGCATACGGGAGCGAAACCTTTTCCTTGTCCAGTGTGTGAGAAATCCTTTACCACAAATTACGGTATGAAACTACATCTAGAGGAACATAAAAATCCAGGCAGCACTAGACAACAAAGATATCGATGTAAAAAATGTCCACGaacttttacaaatataaaaaattatgagaaaCATTGCAAGCTAACTGAATGTGTTCTTAAGAAAAGtgataataaataa
Protein Sequence: MPGCCLCGNDFKIGFKIFEVRFGQPPVVIHDIVIECIGPSYKDDDSNKSDNDTRSEIQSFSEVKLDENYSNFSPVMKKEIIDEKYIDFHTDLGLNDFDFDNKSESECIDSLDISNAKKTETDGKKTINESLNSNKTAHKPVKKRTKTAYKFGSICDQCGKTFHSYTGFIYHRRTHDPVKHFKCSICGESYRNKFRLKLHMAYHTGETPFECDICSKRFVHKIGLNKHKQTHDERSRRVECEQCGFKVRSKSHLLRHMITHTGARPFPCPVCDKCFATNYGMKLHLKEHQNPGSTRQQRYRCKKCPRTFTNIKNYEKHCEQNDCIQVTNDNTNEQCYENQVTNKNFEAELDQCDKKSESECIGRLDISNPKEMETKEKKSINESLNNKKPTHKPAKKFGSVCDQCGKSFHSYTGFIYHRRTHDPIKHFKCKICGESYRAKYHLKLHMAYHTGETPFECEICSKRFVHKIALNKHKQTHDEQHRRFECEQCGLKLRSKSHLRRHMITHTGAKPFPCPVCEKSFTTNYGMKLHLEEHKNPGSTRQQRYRCKKCPRTFTNIKNYEKHCKLTECVLKKSDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -