Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: su(Hw)
Assembly: GCA_002237135.5
Location: CM026971.3:132261015-132273335[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3e-06 0.00046 21.8 0.4 1 23 113 135 113 135 0.98

2 15 7.1e-05 0.011 17.4 1.4 1 23 141 163 141 163 0.98

3 15 0.0041 0.63 11.9 1.9 1 23 169 191 169 191 0.97

4 15 2.2e-06 0.00034 22.2 0.9 1 23 195 217 195 217 0.97

5 15 0.03 4.7 9.2 0.2 1 20 288 307 288 309 0.95

6 15 0.0016 0.24 13.2 0.4 2 23 359 381 358 381 0.92

7 15 0.025 3.9 9.4 0.9 1 23 387 409 387 409 0.97

8 15 0.17 27 6.8 4.9 1 21 426 446 426 448 0.94

9 15 8.7e-08 1.3e-05 26.6 2.2 1 23 454 476 454 476 0.98

10 15 4.7e-06 0.00073 21.1 1.7 1 23 482 504 482 504 0.98

11 15 2e-05 0.0031 19.1 4.6 1 23 740 762 740 762 0.99

12 15 2.7e-06 0.00043 21.9 2.0 1 23 768 790 768 790 0.98

13 15 0.0018 0.27 13.0 4.1 1 23 796 818 796 818 0.98

14 15 3.9e-05 0.0061 18.2 0.8 1 23 822 844 822 844 0.97

15 15 0.00031 0.047 15.4 0.5 1 23 859 883 859 883 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3e-06	0.00046	21.8	0.4	1	23	113	135	113	135	0.98
2	15	7.1e-05	0.011	17.4	1.4	1	23	141	163	141	163	0.98
3	15	0.0041	0.63	11.9	1.9	1	23	169	191	169	191	0.97
4	15	2.2e-06	0.00034	22.2	0.9	1	23	195	217	195	217	0.97
5	15	0.03	4.7	9.2	0.2	1	20	288	307	288	309	0.95
6	15	0.0016	0.24	13.2	0.4	2	23	359	381	358	381	0.92
7	15	0.025	3.9	9.4	0.9	1	23	387	409	387	409	0.97
8	15	0.17	27	6.8	4.9	1	21	426	446	426	448	0.94
9	15	8.7e-08	1.3e-05	26.6	2.2	1	23	454	476	454	476	0.98
10	15	4.7e-06	0.00073	21.1	1.7	1	23	482	504	482	504	0.98
11	15	2e-05	0.0031	19.1	4.6	1	23	740	762	740	762	0.99
12	15	2.7e-06	0.00043	21.9	2.0	1	23	768	790	768	790	0.98
13	15	0.0018	0.27	13.0	4.1	1	23	796	818	796	818	0.98
14	15	3.9e-05	0.0061	18.2	0.8	1	23	822	844	822	844	0.97
15	15	0.00031	0.047	15.4	0.5	1	23	859	883	859	883	0.93

Sequence Information

Coding Sequence: atgaAGCCTAAAGTTACTGTTCCTGAATGTCTGAATGGTTCCATCACAAATGATCGTACATCAATTGAAAATGATATCATTGCTcaacaatttattaagaatGTAGTATCTAAAACAAGTACAGAAAACGAAGAGTACTCTGTTATAACATTAGAGAATTATACCATAAAAACGGAACCGGAAACTAATGTTTCTGAAACTCTAGTTAGTGGTATTGTAGATGATCGATCATGTCTCGGAATTGGCGATAAAGTAACTGAACCAACCACAAagccattattaaaaaataattctgtttcaaaAAAACATAAACGTACACATAAAAAAGACAGacattttaattgtgatatttgTGGGAATACGTTTTCTTCACTGAGTGCGTTGACAGTGCATCGCCGCTCTCACACTGGAGAAAAACCATACTCATGCACTAAAtgtaataaaaaatttgttgctaaGATAGGACTTAATCTTCACATGAAACGACATATTGGTGAAAAGCCACACGTTTGCCTTGAATGTGGAAAACGTTTTATGCTCGCCTTTGAGCTACGTTATCACAGTAAAACTCATTTACGACTATTTGCTTGCGATGAATGTGacgaaaaattcaaaacaaataaaaaACTTTTAAAACATATCAGAATTCATTCATCTGTAAGAAAGCGGGAAAACAAAGCCCAGAagcataaattcaaattcatggAATGCAATGTGGCAGAGGAAGAACTTAAAAATCATTACGACAGGGGAGATCATATAAATATAGTGAAATCGGAGgacaaaatttctaatataaatgataGGGTCCATTTGAATGCTGACGGTACAAAAGAAGCAGTTAAGGATCGTATTCCAAAATACAAATGCGGTAGCTGCTTGAAGTCATATAAAGTATTTGGTATGCTTAAAAAACATTTAGCTGTGTGCTATTTGAATAGTAGTTATCACTCTCGAAAAGcagaaatgataaaaaatatacagaaaatcGAAGAGGATGCGGTTAAACTAGAGAAGGAGAATATATGCTTTTGCTGCGGTGAAAGTTATGATACATTTCATagagGTCATATATATTGCTCTGATTGCccaaattcatttaaaactcAAATAAGTTACGAACGACATGTTTTTATAACGCATTCGGAAGTTGATAAATTTCCTTGTTCCAAATGTGAAGCAAAATTGCGTACAGCTACGCTACTGAAGTTACACAAAAAGCAACACACAACTTCTGAAAGATTGCATAAACGTGCACATACAAGAAAGGAACCTTTTATTTGCGACTTTTGTGAGAAGAAATGTTTTTCACCGGGTGAATTGAAAATACATCGTCGTTGTCACACCGGTGAAAAACCCTACGCATGCACTGaatgcAACCAAACATTTTCTACTAAGAGCTCACTTAATCGACATTTGAGACGGCATACAGGTGAAAAGCCCTACACTTGTACTGAATGTGAAAAAAGTTTTGCTATTAAGCACGCACTCAATCGTCATATGGAGCGTCATATTGGTGATAAGTCACACATAGAATTTAATTCAGTTAAAGATTCGATCTTTCACTTCCTGAAGATACACAGAGAGCATCCACAGACTTTCCTCAGTGCTAAATGTGCCCAAAACTTAGAACCAAATAATGTCGCTACGTCATCAGAAAAGCATTACAGAAGTGATAATTCCAACGAAAACCCTATTGAAAATGTTACTCCAACTGATAACAATGTCTTGCCATCACTTAAATATGAAGAACTTTCGTCAATGGTAAATGGAGTTATTAAACAAGAATGTATAGTAGATGAAAGAACTGAACCAAccacagaaaaattattattcaataacgaaaataaaagtgaaaggaTACAGCCAACACATATGAGTAATAATGAACAAATATACATCAATGATGAAGTTATTAtgcaacaatttataaaacaagaaGATCCCGATGCACCTGCAGAGAATTTACTATTAGAAAGCGAAATGTATAGTATTATAACAATAGAAAATGAGACTATTAAAAATGAACCAGAATCTGCTGTTACTGAAACTCCAGACGGTACAATTATAAATGATCGAATACCTCTCGATTATGGCGGTGTTTCacaaaaagtaatagaaaataGTGAAACTGAAACAGTTACTGAGCAATTAATTATGGAAAACGAATCAACTGTGTTCAAGATTCATATGAGgcgacatactggtgaaaaacccTACAAATGCACTGaatgtaatCGACATTTTTCTATAATGAGCTCACTCAAAAGTCATATGAGgcgacatactggtgaaaagcCCTATTCATGCACTGaatgtaataaaagttttgcgTCTAAGCAGAGACTAAAGATTCATATGCAGCGACATGCAGACCAGAAGCCACACGTTTGCAATGAATGTGGGAAGTGTTTTCTACAGGAAATTGAGCTACGTTATCACAGAAAAACTCATTTACACCCATTTGCCTGTGATCAGtgtgaagaaaaatttaaaaccaataagaaACTTGAACAACATATTGAAACTCATTCATCtgaaaacaaacagaaaaatgaaCCTCAGGGACATAAATTCAAGTGCAAAGATTGCGAAGCGATATATTCGACAGAGGATGAGTTGAAAATTCATCATAACACGGGAATTCATTTAGatTTGGAAAAACGTCGTAGAGACGAAGCGAGTTTTGACAAGAAATTTAAGCCATGTTCcgataaaaatcaaatgaaaaatattacaagacctaaaagaaaaattaaattacccGTAAAATATCGTGAAGAAAATTCTTCTATTGTCCAAGAATTTATAAAGGATGAAGTATGTGAAATAAGCACAGagcaaatattattagaaaacgaAGAATACAATTCTATGACACTAGAAAATCAGAGTATAAAAACCGAGCCGGACACCACTGTTCCCGATACTCCAGCTAGTTCATTCAAAAGTGGCGTTGCagaattagaatatataaaatcagaAACTAATGAAGCAAATACATAG
Protein Sequence: MKPKVTVPECLNGSITNDRTSIENDIIAQQFIKNVVSKTSTENEEYSVITLENYTIKTEPETNVSETLVSGIVDDRSCLGIGDKVTEPTTKPLLKNNSVSKKHKRTHKKDRHFNCDICGNTFSSLSALTVHRRSHTGEKPYSCTKCNKKFVAKIGLNLHMKRHIGEKPHVCLECGKRFMLAFELRYHSKTHLRLFACDECDEKFKTNKKLLKHIRIHSSVRKRENKAQKHKFKFMECNVAEEELKNHYDRGDHINIVKSEDKISNINDRVHLNADGTKEAVKDRIPKYKCGSCLKSYKVFGMLKKHLAVCYLNSSYHSRKAEMIKNIQKIEEDAVKLEKENICFCCGESYDTFHRGHIYCSDCPNSFKTQISYERHVFITHSEVDKFPCSKCEAKLRTATLLKLHKKQHTTSERLHKRAHTRKEPFICDFCEKKCFSPGELKIHRRCHTGEKPYACTECNQTFSTKSSLNRHLRRHTGEKPYTCTECEKSFAIKHALNRHMERHIGDKSHIEFNSVKDSIFHFLKIHREHPQTFLSAKCAQNLEPNNVATSSEKHYRSDNSNENPIENVTPTDNNVLPSLKYEELSSMVNGVIKQECIVDERTEPTTEKLLFNNENKSERIQPTHMSNNEQIYINDEVIMQQFIKQEDPDAPAENLLLESEMYSIITIENETIKNEPESAVTETPDGTIINDRIPLDYGGVSQKVIENSETETVTEQLIMENESTVFKIHMRRHTGEKPYKCTECNRHFSIMSSLKSHMRRHTGEKPYSCTECNKSFASKQRLKIHMQRHADQKPHVCNECGKCFLQEIELRYHRKTHLHPFACDQCEEKFKTNKKLEQHIETHSSENKQKNEPQGHKFKCKDCEAIYSTEDELKIHHNTGIHLDLEKRRRDEASFDKKFKPCSDKNQMKNITRPKRKIKLPVKYREENSSIVQEFIKDEVCEISTEQILLENEEYNSMTLENQSIKTEPDTTVPDTPASSFKSGVAELEYIKSETNEANT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -