Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: su(Hw)
Assembly: GCA_002237135.5
Location: CM026971.3:132074442-132088108[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00014 0.021 16.5 0.5 3 23 37 58 35 58 0.93

2 15 0.06 9.3 8.2 0.2 1 23 64 86 64 86 0.94

3 15 0.00012 0.018 16.8 0.4 1 23 441 463 441 463 0.99

4 15 0.0019 0.29 13.0 5.3 1 23 469 491 469 491 0.99

5 15 4.1e-07 6.3e-05 24.5 1.1 1 23 497 519 497 519 0.98

6 15 6.9e-07 0.00011 23.8 1.6 1 23 525 547 525 547 0.99

7 15 7.8e-06 0.0012 20.5 1.8 1 23 553 575 553 575 0.96

8 15 3e-06 0.00047 21.7 0.4 1 23 581 603 581 603 0.99

9 15 1.5e-05 0.0024 19.5 1.9 1 23 737 759 737 759 0.97

10 15 0.00011 0.017 16.9 4.8 1 23 765 787 765 787 0.98

11 15 1.2e-05 0.0019 19.8 3.6 1 23 793 815 793 815 0.98

12 15 0.015 2.3 10.1 1.4 1 23 821 843 821 843 0.96

13 15 1.1e-05 0.0016 20.0 0.6 1 23 847 869 847 869 0.97

14 15 0.0057 0.89 11.4 0.1 1 22 884 905 884 908 0.90

15 15 0.15 23 7.0 0.1 5 23 921 940 918 940 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00014	0.021	16.5	0.5	3	23	37	58	35	58	0.93
2	15	0.06	9.3	8.2	0.2	1	23	64	86	64	86	0.94
3	15	0.00012	0.018	16.8	0.4	1	23	441	463	441	463	0.99
4	15	0.0019	0.29	13.0	5.3	1	23	469	491	469	491	0.99
5	15	4.1e-07	6.3e-05	24.5	1.1	1	23	497	519	497	519	0.98
6	15	6.9e-07	0.00011	23.8	1.6	1	23	525	547	525	547	0.99
7	15	7.8e-06	0.0012	20.5	1.8	1	23	553	575	553	575	0.96
8	15	3e-06	0.00047	21.7	0.4	1	23	581	603	581	603	0.99
9	15	1.5e-05	0.0024	19.5	1.9	1	23	737	759	737	759	0.97
10	15	0.00011	0.017	16.9	4.8	1	23	765	787	765	787	0.98
11	15	1.2e-05	0.0019	19.8	3.6	1	23	793	815	793	815	0.98
12	15	0.015	2.3	10.1	1.4	1	23	821	843	821	843	0.96
13	15	1.1e-05	0.0016	20.0	0.6	1	23	847	869	847	869	0.97
14	15	0.0057	0.89	11.4	0.1	1	22	884	905	884	908	0.90
15	15	0.15	23	7.0	0.1	5	23	921	940	918	940	0.90

Sequence Information

Coding Sequence: ATGAATgatatggaaaaaattgaaaaggacACTATTAGTATTGAGAATGAAGATATTTGTTTTTGCTGCGGTGAAAGTCATGACATATTTCATATGGGTGAAATAAATTGTTCGGATTgttcaaaatcatttaaaacacAAATCGGCTACGAGcgacatatttttataacacattCAGAATCCAATGAATTTTCTTGTTCTATATGTAATGCAAAATTGCGCACATCTGATTTGATGAGGTTGCATGAAGAAGAACACAAAAATCGTGGAAGATTATATGATTACAAAATGAGCGGCAAggattttaattATGATAAATCGTTAATTAAAGATGATACtactgatataaaatttaaagaaaatgaagtATTAGAGATAACTACAGAGCAAtcgttattaaataatgaactgTGTACTTCAGTAGAAaatgagaatataaaaatagaacccAAAAATAGTATTTCTGAAAGTCTGTTGGAcgttaataaaaacaacaaaatgtcgGTTGAAGATGGCACATCTTTACAACAATTGAATGATAATGAAGTACCTACAACAACCACAGAGCAATTGTTATTAAACAACGAATTATACACTATTATAACACTAGAAAATAAGAATATTCAAATGGAACAAAAAACTATTATCCCAGAAGGTATTATTGATGCTACTAATGAAGACAGAAAGCCTCTTGGTGAGGGAGTAGTTTCACAACAAATtctcaaaaatgaaatatatgatgCTATTAAACAAGAAACTGATAGTAATAATATAGCAGCGGAAACACCTGCTCCTGAATGTTTAGTTAATGACATAACACATGTTCGAACatcaattgataataatttagttaaacaatttataaaagatgAACCACATGAAAATTTCACTGATCAACTATTAAGAAATGTGGAGTATACTGTAgatatactagaaaataaaagaataaaattagaGTCGGTAACTAATGTTATTGAAGCCGTAGTAGGTACGGTAACAGACGATCAAATGTCATTGAACGATAGCGTTGATATACAACAATCTATCAAAGTTGAAGCTGATGAAACAAATACAGAAGAATTATACAGTGTTATAACACTGGAAAATGAGAGTATAAAAGTGGAGCCGAATACTACAGTTCTAGAAAGTTTGAATGGTGTTGTTACAGACGATCGAACTTCAATCAGAGATGAGGTTTTAATGTCACAAATCACACAAAACGAAGAGAAGCAGCACACAGAGCAACATAAAAGTGGTGACAAGGTTCAGGCATCCACAATTTTAAAAAATCGTGAAAGTACCCATAAAGATGAGAGCCCTTTTACTTGCGACTATTGTGGTGAGAAATTTTCAGTATTGAGTATTTTAGAAGATCATCGTCGTACACACACTGGCGAAAAACGTTACACCTGTACTGAAtgcaATAAAAGCTTTGCGTGCAAGCGTGCTCTTAAATATCATACAAGGCGgcatactggtgaaaaacccTTCACATGTGCTGATtgcaataaaagttttgctgttaAACAAGAACTCAAACGTCATATGAGGCAGCATACTGGCGAAAAACCTTACAAATGCACTGAAtgtgATCAAAGCTTTAATATTAAGGACTCTTTGAACCGTCATATGAATCGTCATACTGGAGAAAAACCGCACATATGCGCCAAATGTAATAAAAGCTTTGCAGTTAAGGAATCACTAAATCGTCATATGAAACTACATTCTGGTGAAAAACCCTATTCGTGTCCTCAATGTAATAATAGTTTTGCTGTTAAGGAAGCTCTCAAGCGGCATATAAGGCGACATGCTGGTGAAAAACCTTTCTCATGCATTAAATCTAAACAATGTTTTGCTCGGCAGCAAACAAAACCCACAGTTCGTGAAAATTCAATTGATATCATTTCAGACAATCAAACAACAATCAAAGATGATGTTTCAGAAAAGCCCACacgactattatttttaatagaaaacgAAAATACTAATATGATAACGCTAGAAAATGAAACTATAAAACAAGAGCCGGAAGTTACTGACGATACCCATGATACGCATGTAAATGGTCAAACTTCTAATAAAGATGATTCTACTGTACAagaatttataaacgatgaacTAGCTGAAACATCTACCGAGCAgctgttattaaaaaatgaaactataGCTTTAaatGCTCATAAAGGCATGCATACGGATGACCGTCCTTTTGCATGTGACTTCTGTGATAAGAAATTTCCATATTTGAGTACACTGAAAAATCATCGTCGTTCCCACACTGGTGAAAAACCTTTCACATGTACTGAAtgtaatCAAAGCTTTACTGCTAAACAGTCACTCTATCATCACATGAAacgacatactggtgaaaaacccTTCTCTTGCACTGAAtgCAATCAAAGTTTTGCTCGTAAGCAAGTGCTCAATCACCATATGAGACGACATACAGGTGAAAAACCACACGTTTGCAATGAATGTGGTTTAAGTTTTTTTGAAGCTACTCGACTACGTTATCATAGCAAAATTCATCTTCGTCCATTTGCTTGTGATCAGTGTGACGAAAAATTCAAATCCATTAAGCAactTCAGCAGCACATCAGAATACATTTGTCTAATAGAACCGGTGAAGAAGACATCCAAGAACAGACATTTAAATGCAAAGAATGCAATGTTACATACGTTACGGAGGAAGAACTTGATAGTCATTACGACATGGGAGTTCATAAaaACATGAAAAAAGGACAAACAGAGGACTGTATAgtttgcaacaaaaaatttggtTCAATTAAAACTCTAAATTCCCACATAATTGAAGTACATAAGGAGCAACCGCTGACTTTCAATAATGCTAAATCTGcacttaaattaaagaaaaatcgttCCAATTCTTCATCAACAATAATGTACGAATGTAATGGTCTTAACGAAAATGCCAATACAAATGTCACTATTGCTGCTAATGACAGTACATTAACAGTAAAATATGCGGATcaacaatatataatagataatgtagctaaaaaagaaacagaagaaTTGTTATTAGTAAACGAAGTGTATACTACATTACAGAATGCAAATATTAAGACAGAGCCAGTCGACTGCGCAGTCGATGATATAGATGATACATCTGATGATgcattatag
Protein Sequence: MNDMEKIEKDTISIENEDICFCCGESHDIFHMGEINCSDCSKSFKTQIGYERHIFITHSESNEFSCSICNAKLRTSDLMRLHEEEHKNRGRLYDYKMSGKDFNYDKSLIKDDTTDIKFKENEVLEITTEQSLLNNELCTSVENENIKIEPKNSISESLLDVNKNNKMSVEDGTSLQQLNDNEVPTTTTEQLLLNNELYTIITLENKNIQMEQKTIIPEGIIDATNEDRKPLGEGVVSQQILKNEIYDAIKQETDSNNIAAETPAPECLVNDITHVRTSIDNNLVKQFIKDEPHENFTDQLLRNVEYTVDILENKRIKLESVTNVIEAVVGTVTDDQMSLNDSVDIQQSIKVEADETNTEELYSVITLENESIKVEPNTTVLESLNGVVTDDRTSIRDEVLMSQITQNEEKQHTEQHKSGDKVQASTILKNRESTHKDESPFTCDYCGEKFSVLSILEDHRRTHTGEKRYTCTECNKSFACKRALKYHTRRHTGEKPFTCADCNKSFAVKQELKRHMRQHTGEKPYKCTECDQSFNIKDSLNRHMNRHTGEKPHICAKCNKSFAVKESLNRHMKLHSGEKPYSCPQCNNSFAVKEALKRHIRRHAGEKPFSCIKSKQCFARQQTKPTVRENSIDIISDNQTTIKDDVSEKPTRLLFLIENENTNMITLENETIKQEPEVTDDTHDTHVNGQTSNKDDSTVQEFINDELAETSTEQLLLKNETIALNAHKGMHTDDRPFACDFCDKKFPYLSTLKNHRRSHTGEKPFTCTECNQSFTAKQSLYHHMKRHTGEKPFSCTECNQSFARKQVLNHHMRRHTGEKPHVCNECGLSFFEATRLRYHSKIHLRPFACDQCDEKFKSIKQLQQHIRIHLSNRTGEEDIQEQTFKCKECNVTYVTEEELDSHYDMGVHKNMKKGQTEDCIVCNKKFGSIKTLNSHIIEVHKEQPLTFNNAKSALKLKKNRSNSSSTIMYECNGLNENANTNVTIAANDSTLTVKYADQQYIIDNVAKKETEELLLVNEVYTTLQNANIKTEPVDCAVDDIDDTSDDAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -