Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: su(Hw)
Assembly: GCA_002237135.5
Location: CM026971.3:132067644-132072067[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00071 0.11 14.3 3.8 1 19 79 97 79 99 0.95

2 18 2.9e-05 0.0045 18.7 0.6 2 23 142 163 141 163 0.97

3 18 0.018 2.8 9.9 3.4 3 23 176 196 175 196 0.97

4 18 5.4e-05 0.0083 17.8 0.5 1 23 202 224 202 224 0.97

5 18 0.12 19 7.2 0.2 7 23 236 252 230 252 0.90

6 18 4.9e-05 0.0075 18.0 3.5 1 23 258 280 258 280 0.99

7 18 0.0019 0.3 12.9 0.4 1 23 286 308 286 308 0.96

8 18 0.00026 0.041 15.6 1.7 1 23 707 729 707 729 0.98

9 18 4.2e-05 0.0065 18.2 1.0 1 23 735 757 735 757 0.98

10 18 2.6e-06 0.0004 22.0 3.3 1 23 763 785 763 785 0.98

11 18 0.00015 0.023 16.4 5.3 1 23 791 813 791 813 0.98

12 18 1.6e-05 0.0025 19.4 3.2 1 23 819 841 819 841 0.95

13 18 1.3e-06 0.0002 22.9 1.8 1 23 847 869 847 869 0.99

14 18 4.4e-06 0.00068 21.2 3.4 1 23 875 897 875 897 0.98

15 18 2.4e-06 0.00037 22.1 1.5 1 23 903 925 903 925 0.99

16 18 1.9e-06 0.00029 22.4 2.9 1 23 931 953 931 953 0.97

17 18 8.8e-06 0.0014 20.3 1.0 1 23 959 981 959 981 0.98

18 18 1.1e-07 1.8e-05 26.2 1.8 1 23 987 1009 987 1009 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00071	0.11	14.3	3.8	1	19	79	97	79	99	0.95
2	18	2.9e-05	0.0045	18.7	0.6	2	23	142	163	141	163	0.97
3	18	0.018	2.8	9.9	3.4	3	23	176	196	175	196	0.97
4	18	5.4e-05	0.0083	17.8	0.5	1	23	202	224	202	224	0.97
5	18	0.12	19	7.2	0.2	7	23	236	252	230	252	0.90
6	18	4.9e-05	0.0075	18.0	3.5	1	23	258	280	258	280	0.99
7	18	0.0019	0.3	12.9	0.4	1	23	286	308	286	308	0.96
8	18	0.00026	0.041	15.6	1.7	1	23	707	729	707	729	0.98
9	18	4.2e-05	0.0065	18.2	1.0	1	23	735	757	735	757	0.98
10	18	2.6e-06	0.0004	22.0	3.3	1	23	763	785	763	785	0.98
11	18	0.00015	0.023	16.4	5.3	1	23	791	813	791	813	0.98
12	18	1.6e-05	0.0025	19.4	3.2	1	23	819	841	819	841	0.95
13	18	1.3e-06	0.0002	22.9	1.8	1	23	847	869	847	869	0.99
14	18	4.4e-06	0.00068	21.2	3.4	1	23	875	897	875	897	0.98
15	18	2.4e-06	0.00037	22.1	1.5	1	23	903	925	903	925	0.99
16	18	1.9e-06	0.00029	22.4	2.9	1	23	931	953	931	953	0.97
17	18	8.8e-06	0.0014	20.3	1.0	1	23	959	981	959	981	0.98
18	18	1.1e-07	1.8e-05	26.2	1.8	1	23	987	1009	987	1009	0.99

Sequence Information

Coding Sequence: ATGCCTAATGCATTTCCACCTAAACAAACATACTTGGTACAAGTGGAAAGTAGACCAGTACAgctaatattaatgaaaatgaatcATGATGATCTACAAAACATTCCCGTTAAGATCGAAGGGTGTCCTATTGTAGCATCAGAATCAACTGTCATCAATACCGATAGTTACCTATTGGAAGAATCAACTTTAAGCGATGATGAAAAGCAAGAAGGTGACGATTGTATTCAAAAACACATCTGTGGTAAATGTCACAAATCGTTTAGACGATATAGTGAGTTTAAAAAACATTCCGCATTTTGTCAGTTCGATAGTGATTACCACTTACGAAAAGCAGATATGATGAAGAATACTGAAAAAATTGAGAGGGAAGCAATTAATATGGAGTCTACTTCCTGTTCATCGAACACATATGAAACAATCAGTTGTGAGGTGtgtaaacaaatgttttctCGTTTAGATAGTTTACAAGAACATTTAAAGCGTCATCTGGACACACAATTAACtaaaacagaagaaaatatGTGCCccatttgtaaaaattgtttttccaatttatcaattttgaaAAAGCATAAACTTAAACATAGAGGAAATCGTCCTTTTGCTTGCGACTTTTGCGATAGAAAATTTCCTGTATTAAGTCTATTGATAAAACATCGTCGTTCTCATACTGGCGAAAAACCATACACATGCGCTGaaCGCAACCAAAGTTTTTCTGCTAAGGGATTACTCAACCGTCATATGAAGCTACATACTAGTGAAAAACCATACACTTGCGCTGAAtgtaATCAATGTTTTACTTCTGAAGACATGCTCAAACAGCATACGAAACGACATACTGATGAAAAACCCTACATatgcactgaaTGTGATCAATGTTTCGCTATTAAGGATTCGGTCAATCTTCATATTGAACTTCATACCATCAGAACGCCTCACGTTTGCaatgaaagtggaataagtttTGACACCACCCGACTACATATTCAACATCCATTTGACTGTAATCAATGTAAAGAAAAACTCAAATCCAGTAAGCAAGACGTTGTTCCAGAACGGCAATTGATAACAGATGAAGGATCTGAAACAACTACAAAGCAATTGGTATTCGAAAACGAAGTATGTAGTACAGTAGAAAATCAGAGTATAAAAATAGAACCCAAAACTAGTATCTCCAAAGGTCTACGTGATGTCAATATAAGCAATCGACCATTGGTTGAAGCGGACACTACTGTAcaacaattaaatgaaaatgaagaacCTGAAAGAACCACCGAGCAATTGTTATTAAACAACGAATTATACACTATTATAACACTAGAAAATGAGAATattaaactgaaacaaaaaactattatcCCTGAAGGTGTAATTGAGTCTACCAATGAAGATCAAACACTTGTTAAAAGTGGATTTGTTGTAGAAGAAGAAGTAGAAGTAAAAGATAATATAACTGAAATAGTTACAGAGCAGCTGTTAGAAAATCATGAATCATGCAGTGTTATTACACACAAAACTAAGAGTATCAATATAGAAACTAGAAATGCTATTCCTGAAACTGGTATTTCTTTAAATAGCATAACATACGATATACCttcaattgataataatttagcAAAGCAAGTTAAAAAAGATGAACCACATCAAATATCTAGACAGcaactattaaaaaatgcaGAGTTCACTGTTACAACGCTAGaaaataagagaataaaatTGGAGTTAGAAACTGCTATTCCAGAAACTGTAGTTGGCACGGTTGCTAAAGAACAATCTATTAAAGTTGAAGCAGCTGAAACAAATTCAGAAGAATTATTACTAGAAAACGAATTATACAGTGTTATAACACTAGAAAGTGAGAACATAAAAATCGAGCCGAACGCTACTGTTTTAGAAAGTTTGACTGATGTTGTTACAGACGATCGAACATCCATTGCAGATGAGATTTTATTGTTACAATtcacagaagaagaagaatttgaaaataattcaaaacaagtTAAAAATTCCTCTTGCTTGTTGAAACAACACATTAAAGAACATAAAAGTggtgataatattaataaatctgcaattttaaaaaaGCGTAAAAGTATACAGAAAGGAGAGGGTCCTTTTACTTGTAACTTTTGTAAGAAGAAATTTCCGGTGTTGAGTGTATTGGAAAACCACCGTCGTTCTCACACTGGTGAAAAACCCTATTCCTGTGCTGAATGCAATCAATGTTTCGCTATCAAAGAGGCACTTAATCTTCATATGAGGCGACATACAGGCGAAAAACCCTTCACATGCACAGAATGTAATCAATGCTTTTCTCGTAAGCAAGCACTCAGTGCTCATATGATGCGACATACTGGTGAAAGGCCATACATGTGTACTGAGtgtaAACATTGTTTTGCTCGTAAACAAGGACTCGAACTTCATATGAAACGACATTCTGGTGAAAAACCCTTTTTATGCACTGAAtgtaGTCAATGTTTTGCTACTAAGGAATCACTAAATCGTCATATGAAGCTgcatactggtgaaaaacccTTTACGTGTCCTGaatgtAATCGAAGGTTTGTGTTCAAGCTTGCCCTCAAACGTCACATGAGGCGACATACGGGTGAAAAACCGCACACATGTACTGAAtgtaaTAAAAGCTTTGGTGTTAAACAAGAACTCAAACGTCATATGAGGCAGCATACAGGCGAAAAACCATACAAATGCACTATgTGTGatcaaagttttaatattaaggaCTCTCTGAATCGTCATATAAATCGTCATACTGGAGTTAAACCCCACACATGTTCTGaatgtaataaaagttttacagTTAAGGAATCACTAAATCGTCATATAAAACTGCATTCTGGTGAAAAGCCTTACTCTtgcactgaaTGTAATAATAGTTTTGCTGTTAAGCAGGCGCTTAAACGTCATATGAGACAACATACTGGTGAAAAGCCCTATAAATGTACTgaatgcAATGAAAGTTTTAATGTTAATGACTCTCTTAAGCGTCATATGAGGCGTCATGCTAAAGAAATTCTACGAATACAACAAAtgcaatcaaaacttttttcttaa
Protein Sequence: MPNAFPPKQTYLVQVESRPVQLILMKMNHDDLQNIPVKIEGCPIVASESTVINTDSYLLEESTLSDDEKQEGDDCIQKHICGKCHKSFRRYSEFKKHSAFCQFDSDYHLRKADMMKNTEKIEREAINMESTSCSSNTYETISCEVCKQMFSRLDSLQEHLKRHLDTQLTKTEENMCPICKNCFSNLSILKKHKLKHRGNRPFACDFCDRKFPVLSLLIKHRRSHTGEKPYTCAERNQSFSAKGLLNRHMKLHTSEKPYTCAECNQCFTSEDMLKQHTKRHTDEKPYICTECDQCFAIKDSVNLHIELHTIRTPHVCNESGISFDTTRLHIQHPFDCNQCKEKLKSSKQDVVPERQLITDEGSETTTKQLVFENEVCSTVENQSIKIEPKTSISKGLRDVNISNRPLVEADTTVQQLNENEEPERTTEQLLLNNELYTIITLENENIKLKQKTIIPEGVIESTNEDQTLVKSGFVVEEEVEVKDNITEIVTEQLLENHESCSVITHKTKSINIETRNAIPETGISLNSITYDIPSIDNNLAKQVKKDEPHQISRQQLLKNAEFTVTTLENKRIKLELETAIPETVVGTVAKEQSIKVEAAETNSEELLLENELYSVITLESENIKIEPNATVLESLTDVVTDDRTSIADEILLLQFTEEEEFENNSKQVKNSSCLLKQHIKEHKSGDNINKSAILKKRKSIQKGEGPFTCNFCKKKFPVLSVLENHRRSHTGEKPYSCAECNQCFAIKEALNLHMRRHTGEKPFTCTECNQCFSRKQALSAHMMRHTGERPYMCTECKHCFARKQGLELHMKRHSGEKPFLCTECSQCFATKESLNRHMKLHTGEKPFTCPECNRRFVFKLALKRHMRRHTGEKPHTCTECNKSFGVKQELKRHMRQHTGEKPYKCTMCDQSFNIKDSLNRHINRHTGVKPHTCSECNKSFTVKESLNRHIKLHSGEKPYSCTECNNSFAVKQALKRHMRQHTGEKPYKCTECNESFNVNDSLKRHMRRHAKEILRIQQMQSKLFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -