Tdal032399.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Teleopsis dalmanni
Gene Symbol
-
Assembly
GCA_002237135.5
Location
CM026972.3:6384298-6393489[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3.6e-05 0.0055 18.4 2.1 1 23 551 573 551 573 0.97
2 18 1.5e-05 0.0024 19.5 0.4 1 23 579 601 579 601 0.97
3 18 5.7e-05 0.0088 17.7 0.6 1 23 607 629 607 629 0.98
4 18 2.5e-05 0.0039 18.9 3.1 1 23 635 657 635 657 0.97
5 18 5.7e-05 0.0088 17.7 4.7 1 23 663 685 663 685 0.99
6 18 0.0001 0.016 16.9 5.7 1 23 691 713 691 713 0.97
7 18 8.5e-07 0.00013 23.5 3.8 1 23 719 741 719 741 0.98
8 18 1.8e-07 2.8e-05 25.6 2.4 1 23 747 769 747 769 0.97
9 18 0.00011 0.016 16.9 6.7 1 23 775 797 775 797 0.97
10 18 3e-05 0.0047 18.6 6.5 1 23 803 825 803 825 0.98
11 18 5.1e-06 0.00079 21.0 4.5 1 23 831 853 831 853 0.98
12 18 1.2e-05 0.0018 19.9 8.1 1 23 859 881 859 881 0.98
13 18 2.6e-06 0.0004 22.0 7.5 1 23 887 909 887 909 0.98
14 18 1.1e-06 0.00017 23.1 7.7 1 23 915 937 915 937 0.98
15 18 0.00034 0.053 15.3 9.5 1 23 943 966 943 966 0.95
16 18 0.00029 0.044 15.5 0.5 1 23 972 994 972 994 0.97
17 18 0.0013 0.2 13.4 3.4 1 23 1004 1026 1004 1026 0.97
18 18 1.5e-05 0.0023 19.6 1.6 1 23 1032 1055 1032 1055 0.96

Sequence Information

Coding Sequence
atgttgcagTCGTCTAatatacaacagcaacaacagcaacagcagcaacagttgCAACTGCAAATTCAGActgaacaacagcaacagcaacagcagcaacagtcGCAACAACTTCAATTAATGTCTGCCATTGGAAATGGCAGCGGCATCGTTACTGCAGTCAATAATTCTGATCCAACCATAGTAATTCCTGATAATTGTATTCTTTTGAGGCTACAACAACATTATCGGTCACATGCtcaccagcagcagcagcagcaaccaCAACcccaaccacaacaacaacaacaacaacagcagcagcagcagtcacaacaacagcaacaacaattgaatATTGTTACAAATGACAGAATCGATGCTGTTGCTGCTACAACGACAACTGCAGTTTCCAATCCTATTGGTACTGTTGTTGGTAGTGACACTACTTCTAATATTGTAACTGcttctttaaataaagatatgaaTCAATCAACTATAATACCAACAAATCCTACTGTTGCAGTAACAACCACTTCACTAATGCAAagtcaacagcaacagcaacagcagcagcagcctCAGCCTCAGCAACAatctcaacaacaacaaccgatTGCTATCacaacagctacaacaacaactgcaacaactcCATATTTGCCAAATGCACAAAATttagGTAAATACTGGGTAGTTACGAATTTGTTTCAAAATCCTGGACAAGCTGCACCGTATAACATTGGCGTTACTCATGCACCTCCATCAACTGTAGTTCCACCAACATTATCTCAGTCAATACCGGCAGACATTAAACCAGTTACAACACCATCGGCAGTAACAACAAGTGCAAAAGTTGCTACTAGTAGCATTGACGCTGCAACGCTACAAATTCCGCAACCTATGTTGACAAATGCAGTTATTGGTCAGCAATTGCCAAATGGTGCTATCCTAGCTGCACAACAGCAACATCCAAACGCCAGAgatcagcaacaacaattacacGTACATAcACTAAATACCAATGATGACAATCGCCAACATGTAacgcaacagcaacaacagcaacacgtTACTCTACAACAGGATATGATTAAAGAAGAAAAGCCTTTTGCTAATGgtaaaataaatcaacataTAATTATGCAACACGTTACAGCTGCGTCGTCGCCTATAAGAGCGGGTGCAGGGACAACTATTACGCTTGGTGCTcctaaaacagaaataaaagatGATGTTATGGGTAAACCACCACCTGGCATCGAAATGTATAAGGTTAATATAGAGGACATATCACAGTTATTCACGTATCATGAAGTATTTGGTAAAATTCATGGTGATATAAATCCACAGTTAACTACACACGCTATACCCGGGCAAACAGTAGGTACATCACATAATGCTGCTAACAATGCTGCGGTTGCAGCTGTTGTAGCAAGTGCTAATGCTACAGCAGCAGCCAACGCTAATGCAAATGCTGGTGCTGTTACGACAACATCTAATTTAACAACGACTATAAGCACAGGTAGTACAACTGCGCCAGCTGGTGCAACCATAACTACCACCACTACTGGACTTCTAATGCCTAAAATGGAGGGTGGCATACCACTTATAGATCAAACAGCTAGTATTACTTTGGCACCTGATGGTACGCCTATTGCCACCGGTAATCATGTTTGCGATATATGCggtaaaatgtttcaatttcgTTATCAATTAATTGTGCATCGACGCTATCACAGCGAACGCAAGCCTTTTAATTGTCAAGTATGTGGTCAAGGGTTTACTACATCTCAGGATCTTACACGTCATGGTAAAATTCATATCGGTGGACCTATGTTCACATGTCTTGTTTGCTTTAATGTATTTGCTAATAATGCCAGTTTGGAGCGGCATATGAAACGCCATTCAACTGACAAGCCTTTCGCTTGTACAATATGTCAAAAAACGTTTGCACGTAAAGAACATTTGGATAATCACTTTCGATCGCATACTGGAGAAACACCTTTTCGCTGTCAATATTGCGCTAAAACATTTACACGAAAAGAGCATATGGTTAATCATGTTCGAAAGCATACGGGTGAAACTCCACATCGTTGCGATATTTGTAAAAAGTCATTTACGCGCAAGGAACATTACGTTAATCACTATATGTGGCATACTGGTCAAACTCCTCATCAATGTGATGTATGTGGCAAGAAATACACACGTAAGGAGCATTTGGCTAATCATATACGTTCTCATACCAATGATACACCATTTCGTTGTGAAATTTGTGGTAAAAGTTTTAGCAGAAAAGAACATTTTACTAATCACATCCTATGGCACACCGGTGAAACACCTCATCGCTGTGATTTCTGTTCAAAGACCTTTACACGTAAGGAGCATTTGTTGAATCATGTACGTCAACATACTGGTGAATCACCGCATCGTTGCACctattgtttaaaaacttttacgcgTAAGGAACATCTCGTTAACCATATACGTCAACATACCGGTGAGACACCGTTTAAGTGCACTTATTGCACAAAAGCGTTCACTCGCAAAGATCATATGGTCAATCATATCCGTCAGCATACAGGCGAATCACCTCACAAGTGCACCTATTGTACCAAAACTTTTACTCGAAAAGAACATCTTACGAACCATGTACGACAGCACACGGGCGAATCGCCGCATAAATGTACATACTGCAGTAAAACATTTACTCGGAAAGAACATCTTACGAATCATATACGCTTGCATACTGGCGATTCACCGCACAAGTGCGAATATTGCCAGAAAACTTTTACACGTAAAGAACATTTGAACAATCATATGCGGCAACATTCTAGTGACAATCCACACTGCTGCAATGTGTGTAATAAACCATTTACGCGTAAGGAACATCTTATTAATCATATGTCACGGTGTCACACTGGTGATCGACCATTTGCTTGTGAAACTTGCGGCAAATCATTTCCTCTTAAAGGAAATTTGCTATTTCATCAACGGAGTCATACAAAAGGTCAAGAATGCGAAAGACCTTTTGCATGTGAAAAATGCCCTAAGAACTTCATATGCAAAGGTCATCTTGTTTCACATATGCGTTCACATTCTGGTGTTAAGCCACATGCGTGCACATTATGTAGTAAAGCTTTTGTTGAACGTGGAAATTTAAAGCGTCATATGAAAATGAACCATCCAGATGCAGTTATGCCACCACCACCTGTGCCACATCCTCAAATACCTGCGGGTATATTAACGCAAGTTAAGCAAGAAATAAAACCTATTCTGaTTCCTCATCAAACACCAACTATGCATACCATACAACAAATAACTTCTGGTGCTTCTGGAGCAAATGCTGTGCAATTGGTACCTGAACTAGTACCTTTAGTTACCTCAACAATAACAtcgcataatagtcaaaaacaacagcagcagcaacaacaaccactTCCACAGCACCAACAGCATCAGCAACAagtacaacaacagcagcagcaacaacaacaacaacagcaacagcagcagcagcaacaacaacaacagcagcagcaacagcagttacaacagcaacatcagTTATTACAGTTATCAATACAACAAGCAGCACATCATCAACAACAAGAACAGCATCgccagcaacagcaacaacaacaacagcagcagcaacaacaacagcaaacacATCATCAGCAACAACAGAATCAAGCtgctcaacaacaacaacaaccacaaacaACGCATTTACAAcctcaacaacagcaacaatcaACACAGCCTGTGCCAATTGCTTTAATACAGGCTGATCCAAGTGCCCTTGCTCGTGCTGCAATGCAATTACACTTACCAGGCAATGTTGAACAACATCCTGTTGTTTACTAA
Protein Sequence
MLQSSNIQQQQQQQQQQLQLQIQTEQQQQQQQQQSQQLQLMSAIGNGSGIVTAVNNSDPTIVIPDNCILLRLQQHYRSHAHQQQQQQPQPQPQQQQQQQQQQQSQQQQQQLNIVTNDRIDAVAATTTTAVSNPIGTVVGSDTTSNIVTASLNKDMNQSTIIPTNPTVAVTTTSLMQSQQQQQQQQQPQPQQQSQQQQPIAITTATTTTATTPYLPNAQNLGKYWVVTNLFQNPGQAAPYNIGVTHAPPSTVVPPTLSQSIPADIKPVTTPSAVTTSAKVATSSIDAATLQIPQPMLTNAVIGQQLPNGAILAAQQQHPNARDQQQQLHVHTLNTNDDNRQHVTQQQQQQHVTLQQDMIKEEKPFANGKINQHIIMQHVTAASSPIRAGAGTTITLGAPKTEIKDDVMGKPPPGIEMYKVNIEDISQLFTYHEVFGKIHGDINPQLTTHAIPGQTVGTSHNAANNAAVAAVVASANATAAANANANAGAVTTTSNLTTTISTGSTTAPAGATITTTTTGLLMPKMEGGIPLIDQTASITLAPDGTPIATGNHVCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHIRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHKCTYCSKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGVKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPVPHPQIPAGILTQVKQEIKPILIPHQTPTMHTIQQITSGASGANAVQLVPELVPLVTSTITSHNSQKQQQQQQQPLPQHQQHQQQVQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQHQLLQLSIQQAAHHQQQEQHRQQQQQQQQQQQQQQQTHHQQQQNQAAQQQQQPQTTHLQPQQQQQSTQPVPIALIQADPSALARAAMQLHLPGNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-