Basic Information

Gene Symbol
Camta1
Assembly
GCA_002237135.5
Location
CM026971.3:38959632-38990933[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.25 1.2e+04 -2.7 0.2 33 68 126 161 116 181 0.58
2 3 7.6e-49 3.5e-44 150.6 2.4 2 116 234 346 233 346 0.98
3 3 0.33 1.5e+04 -3.0 1.1 18 66 537 587 527 620 0.60

Sequence Information

Coding Sequence
ATGGCAGGTTATCGTTCGTTGCCATTAGCACCAGTTTCAGCAACAACAGTATCGGCTACTGCAGTTGCAGCTGCAGCACCGCCTACCGGACCTACCATGTACCATCATCAATCGATGACGGCTATGTCGAATAATGGCATTATCTATCAATCTGCAGTACATGCTTCAATACATAGTTTAAATACAGTACAAAATCAACGATCCTCCACAACACATCATCATCATATTCTAGCAacagcggcagcagcagcagttgcTGCTACAACACGTcaatatacaacaacaactgGTTCCGTTCCACCGTCGGCACAAACAATACCACCGCCACCAACACATCCGTTGCAAGCAGTTGCAGCAGCGGCAGCAGCTGTAGCAGCTCCGCAAAATGGTCATCATGCTTTAGTTCACCCACAATATCATCAttcacaacagcaacaacagcataCGCAGCtgcaacaacatcagcaacaacaagcggctcatcatcatcatcaccaccaccatcatcatcatcagcaacTGGCATTGCATCAGAATCACTTGTTTTTTAGTGGTTCCAGTGTTGGAggacatcatcatcatcatcgtcaaaTTTTTAGTCATATGCAAAGTGCACTCTTACCCTTGAATGTCAatGGGGAACCTATCAAACTCCCAGACAATTTGGAAAGCTTGCCAAGAGCTGACAGTTTCCCGTCACAGCGGCATCGTTGGAATACAAATGAGGAAATCGCGGCGATTCTTATCAGTTTTGATAAGCACAGCGAATGGCAATCGAAAGAAGTCAAAACAAGaccTAAAAGCGGCTCTATGCTTTTGTATTCCCGCAAAAAAGTGCGCTACCGACGTGATGGCTACTGTTGGAAGAAGCGTAAGGATGGGAAGACAACGCGTGAGGATCATATGAAACTTAAAGTACAAGGCACTGAGTGCATCTACGGTTGCTATGTACACTCCGCTATTTTACCAACATTTCATCGCAGGTGTTATTGGTTGTTGCAGaATCCGGATATAGTGTTGGTACATTACTTAAACGTACCTTATCCTGATGATAACAAAATGGCTGTTTTGGCACCAAGTATTACACTCTGGGGTGACAAGAAAGAATGGACTAAAGAGGAACTCGTTAGTCAATTGAAGCCAATGTTGTCAACAGTAACTTCAGATGATGATTCCGATTCCGGCAATGATATTGAAATATCTCATGCCGAAACCGTTGAAACGATTGTCTGTCAGTTAATGGAGAAACAACGAATATCACGTCAAGCGGCGCTTGTTAAACAGTTAGACTGTGGTTGTGGTGATGCATCATGTGCCGATGGCAAAACATGCTCACATCCAGTAATGCGTAGACCTAATCTGTTAAAGTCTGCATCAGAAAGAAGAGTAAACCTTAATGATAACTATAATCAAGCCGTAAATGGTACTCCGAATGTGGTTGTAGGCCCCAAacttTATTCCCGCTGGTCGGAACGTCGTACTCGTGATTCAAATTCGTTGGACAATCAACAGTATCATGCACAGCAATTAGCGCAAGAATCtgcaattaaatttcaaatcattCCACCACAACATAACGAACAAtcccaacagcaacaacaacttgctgtatatcaacaacaacagcagcaacaacaagtTTATCGTCAACAAAGTCTAAATAGCACTCATCAGTTATTAGCTACTAGGAGCAATCTAATAGTACACCAACATCAACAGCAaacacaccaacaacaacagcagcagcaacaacatcagCTTCAACAACTCAATCAAACTGGCTTCAATCAAGCAGTAACCACAACGTCAACAATTATCagcagcaataataataataataatcaaataaatttgcaacGATTTGTCGCAAATCATaatagcaacagcagcagcaacagcaacaataataataataattcacttATGAATAATAGATTACAAATTGCCcgtacaacaataacaacgacGAATGGGAATGGTCTGGGTAATGGAGTTGCAACGCAATTGGATAACGGAGCAACAGTGAATGATgctgaaataattgaaaatgaaaaccacatgtcaacaaattttaatgcaaCTAAAATTAACCGCAATACaaattgcaacaacagcaacaacaacaataataataatcaccaATCCAACAACTTACAATTGAGTATAGTcacacaacaacagcaacaacaacaaagtgataatttaaatgctattaataataacagtaatCAattacaccaacaacaacacccaaaatcacaacaacaaacatcACAAATGTCTCATACAACAACAAACTCATCCTCATCCACCGTCGAACCGATGTGTATGTCACCAGAACATCATCCTTCACCACCACTACATAGCACTTCAGACAACaatcacagcaacaacaacaacacaaatagCAACCCTTTGGTACATTTCTCATTTTCAACTTCACCATCACaatcacaaacaacaacaacatcgaaCTCAAATCCAACACTAGCACATTCCTTAATGGATGGTAATCATGTCAATCCTAAACAATCCACAACAATAAATTCCGACAGTACAGTAACCACATCAGCCGATGAAAATCTAATTAGTTCACATGGCACAGTTATGAGTGGTGAAATGACTGCCAGCAATGTTGATGATGAGAATGCTAACAATCAAACAGTGGAGATGTCAACAAATGACAACAATGGCAATCAACATTTGAATTCTTCCAAtatcaataacaacaaaaaccaaaacaatatcaacaacaataaaaacaacaatcaGCCAACAGAGTACAAtagcagcaatagcagcaacaaATCATTAAATGGTTGTGCGAAACTAGGTGCTTCCAGCAACATTTCCACTGTGGattgcaacaacagcaacagcagcaactcTAGTGTTGATCACCCAGGTAATGATGGGAGAACAGAGCAAAATTCAGtagaatttattgaaactatGGATATGAACAATGGTAACGAACAGCAACTCACTGAGCATACGTCACATGAATTGCAGGAGTCGTTAGGTTTTTTCAACGAAACCCTTGATCTATCACAAGAAGATATACAACGCACACTTATTGCTAATATGCCATTTAGCAATGGAAGTGTTAAACAACAGAATTCAACATTACTTATGGGTACTAGTATATGCATAGAAAACAATGAAAGTGAAATACCGGTGACAAGTGTCACTGGTGGTGATGACGAAGATGCTGAGGATGTTTTTGCTAATTTAGATGCATTCGATATGTTAGTTGAATTTCCTGAATTAGATTTGGATGACAAGCAAGCTTTAAATAATACTGCATTGGGTCATACAGTTGTTCTAACCACAAATGATATCAATAGAGGCGAAGAAGTGAACATAGTCGCTAGAGATGCAGTATTGCAACGAGATTTACAATATCATGAAACTGATAGTCATGACACACATGCAGTAGTGAAACagcaatgcaataaaaaattgttaaatatttgtgattttaGTCCGGAATGGTCTTATCCCGAGGGCGGCGTTAAAGTGTTAGTGGCTGGACCATGGACAGCAGCTTCAACCTACACTGTGCTATTTGATGCACAGCCAGTACCGACTGTTTTAATACAAGAAGGTGTACTACGTTGTTATTGTCCAGCACATGAAGTTGGTTTTGTGTCATTGCAAGTATCTTGTGATGGCTTTGTGATATCAAATGCAGTCatgtttgaatataaaatgtCTTATTGTCAAGAGGCACAATACGATGTTACTTCCAATGATtgtctttataaattttctttattgaatcgtTTAACGTCCATTGAAGAAAAATTGCAAATCAAAACAGAAAGTGGAATTGTGAATGAACAACACGCTTTCTACATGCAAACTAACTTTGAGGAGAAGCTTATCAATTATTGTCATCAATTGACGAAACGTACTTGGCCTGTAAATACCAACAGTAATTGGAATAATAGTTTCAAGGGAATGACACTTTTGCATTTAGCTTCAGCACTCGGCTATGCTAAATTAATGTGTGCTATGCTAAATTGGCGTTCAGAGAatccaaatattattttagaaaccGAAATTGATGCACTTAGTCAGGATATACATGGCAATACACCAATGGCTTGGGCTTGTGCAAGAGGACATATCGAAACCgctacaattttatataagtggAACCACAAtgcacttaaaattaaaaataatttacaacaatCTCCATTGGAAATAGCTACCGCTAAAGGTCACAAACATTTATTAGCTGAAATTTATCGCTTAGAAAATGAGAGACGTAGGAATCAAAACAGTGGATCATTAAGCAGTTTATCTTTgaacttaacaaaatatattaTCAATGACATAGAATCCAAAACATCGAATCCAAACGAAgagttatttgaatttaaagaagAACACATATTTCCAACCTATGATACCATTGAGACACATAAAAGTCATGATGGTGTCTTTTTAAGACCAGTAGCTCTAGCaagCAATCAAAGTCCGCCAAACAATACACGTTATTCAAAACGATCTTCCATTGACAGTGGTATCAATATGGATATCAGAACCAAACCTGGAAAGTCCTTTAAAGATGCTAATAAGTTACATAGctttGATGCTCATGACAATTATGGCTTAGAATCTCCATTGGATTCTTTAACCGGTACGAATACAACGAATTCACTTTTATCGCCTTTGAGGAAAATGGATTTTGCTTTAtgcGAAGTTTCTACTGGCGATTCAAGTCCTTTACCCGATAAAGATCACGATGACACTTCAACGATTAATAATGATGATATAACCGATGTAACAATCGGTAATGAGACCGATGTTATTGTAGgggACTCTGATGCAAAGGTGCTGACATTAGCTGAGCATATAATAGCCGCTATGCCAGAACGTATAaagaatgaaGCTGATGAAATGATGGTGCTTGGCAGTCCAATGACTGAACCACTTAATACTGAAACTTCCggtttaaatgataattttatggATACACTTTTAGACTCTTTACCGAATACACATTTCGATAGTGATTTTAGCTTTGAATATAATAACTGTGATTATCGTTATCATGATGTCAGCACACCTTGCTCAAGTTTAAGTCCAGCAAGCTCTGGACCTTTACAATCACCAGCAAGTTACTCCATACTTGGTCATGATCCTTCAGTTAGTTCACCAAGTCCACCACCATCAACAAAACAATTAACAGAATTTCTTAATGCTTCAAGTAGTAATCAATATCCATTTGAGGCTGATTTTTCAAAACTAACACTGACCGATACAGAACAACGTGAATTATATGAAGCCGccaaatgtatacaaaaagcaTATCGTTCATATAAAGGTCGCCAGAAACTTGAAGAGCAAAACAAAGAACGTACAGCTGCAATTGTTATACAAAACTATTACCGTCGTTATAAACAATATGCATATTATAGACAAATGACCAATGCAGCATTAGTTATACAACATGGTTATCGATCATATCGTCGTAATAAACGCTTTAAAAAATCCAAATCGTCCACAACGAGTTCATTAACTAATCTGGGCAGCCAACATAGCAACAATTCACAATGCTTGTCCAGCTTTTATGATCATTATAAAAATGATCAACAACAAGAATATTGCTCCTCGCAACcaagtacaccaaaagaaacTAGTCCTTCGGGACCACTTAAACGAACTTATTCACAATCAACACAGAATCAAGCTGCCAGAAAAATTCAACAGTTCATGAGACAATCACGAATTAAacTGCAGAGAGAACGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCCGGGAGGAGTACCTTCAAAGCTTGCAGTATCAAGGACAAGTGGAAATTGCTTATCAACGAGAAAGAAGgtaa
Protein Sequence
MAGYRSLPLAPVSATTVSATAVAAAAPPTGPTMYHHQSMTAMSNNGIIYQSAVHASIHSLNTVQNQRSSTTHHHHILATAAAAAVAATTRQYTTTTGSVPPSAQTIPPPPTHPLQAVAAAAAAVAAPQNGHHALVHPQYHHSQQQQQHTQLQQHQQQQAAHHHHHHHHHHHQQLALHQNHLFFSGSSVGGHHHHHRQIFSHMQSALLPLNVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVLAPSITLWGDKKEWTKEELVSQLKPMLSTVTSDDDSDSGNDIEISHAETVETIVCQLMEKQRISRQAALVKQLDCGCGDASCADGKTCSHPVMRRPNLLKSASERRVNLNDNYNQAVNGTPNVVVGPKLYSRWSERRTRDSNSLDNQQYHAQQLAQESAIKFQIIPPQHNEQSQQQQQLAVYQQQQQQQQVYRQQSLNSTHQLLATRSNLIVHQHQQQTHQQQQQQQQHQLQQLNQTGFNQAVTTTSTIISSNNNNNNQINLQRFVANHNSNSSSNSNNNNNNSLMNNRLQIARTTITTTNGNGLGNGVATQLDNGATVNDAEIIENENHMSTNFNATKINRNTNCNNSNNNNNNNHQSNNLQLSIVTQQQQQQQSDNLNAINNNSNQLHQQQHPKSQQQTSQMSHTTTNSSSSTVEPMCMSPEHHPSPPLHSTSDNNHSNNNNTNSNPLVHFSFSTSPSQSQTTTTSNSNPTLAHSLMDGNHVNPKQSTTINSDSTVTTSADENLISSHGTVMSGEMTASNVDDENANNQTVEMSTNDNNGNQHLNSSNINNNKNQNNINNNKNNNQPTEYNSSNSSNKSLNGCAKLGASSNISTVDCNNSNSSNSSVDHPGNDGRTEQNSVEFIETMDMNNGNEQQLTEHTSHELQESLGFFNETLDLSQEDIQRTLIANMPFSNGSVKQQNSTLLMGTSICIENNESEIPVTSVTGGDDEDAEDVFANLDAFDMLVEFPELDLDDKQALNNTALGHTVVLTTNDINRGEEVNIVARDAVLQRDLQYHETDSHDTHAVVKQQCNKKLLNICDFSPEWSYPEGGVKVLVAGPWTAASTYTVLFDAQPVPTVLIQEGVLRCYCPAHEVGFVSLQVSCDGFVISNAVMFEYKMSYCQEAQYDVTSNDCLYKFSLLNRLTSIEEKLQIKTESGIVNEQHAFYMQTNFEEKLINYCHQLTKRTWPVNTNSNWNNSFKGMTLLHLASALGYAKLMCAMLNWRSENPNIILETEIDALSQDIHGNTPMAWACARGHIETATILYKWNHNALKIKNNLQQSPLEIATAKGHKHLLAEIYRLENERRRNQNSGSLSSLSLNLTKYIINDIESKTSNPNEELFEFKEEHIFPTYDTIETHKSHDGVFLRPVALASNQSPPNNTRYSKRSSIDSGINMDIRTKPGKSFKDANKLHSFDAHDNYGLESPLDSLTGTNTTNSLLSPLRKMDFALCEVSTGDSSPLPDKDHDDTSTINNDDITDVTIGNETDVIVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPMTEPLNTETSGLNDNFMDTLLDSLPNTHFDSDFSFEYNNCDYRYHDVSTPCSSLSPASSGPLQSPASYSILGHDPSVSSPSPPPSTKQLTEFLNASSSNQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSKSSTTSSLTNLGSQHSNNSQCLSSFYDHYKNDQQQEYCSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRREEYLQSLQYQGQVEIAYQRERR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-