Basic Information

Gene Symbol
mybA
Assembly
GCA_002237135.5
Location
CM026971.3:86350320-86352739[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.1 9.7e+03 -1.9 0.0 4 18 178 192 177 193 0.90
2 5 1.7e-11 3.2e-08 34.9 0.1 2 44 267 310 266 312 0.94
3 5 0.0023 4.4 8.8 0.0 3 44 322 367 320 369 0.83
4 5 6e-13 1.2e-09 39.5 0.0 2 46 376 421 375 421 0.92
5 5 4.6e-12 8.7e-09 36.7 0.1 3 45 429 472 427 473 0.95

Sequence Information

Coding Sequence
ATGGAAAATAGCGATGAGGATGATACGTCAAGCGACTCAGTCGATGAATCAGGAAGCGATATTGAAGACATAGAGGAAAATGCTTGGACAGATAATACTACAGTATTTGATAGTCAATTTGACacagaaactataaaaattgaCTGCGAACAACTCGTTAAAAACTTACATTGCTTAATCAAAGAATTGCCAAATATGGAATGTGGTTCTACTGTGAAAGATGCTTTGAAACTAAATGAAATCTTAATAGAGCAAttggaaaatttcaaaaaactatttacgttGCAATTAAAGAGAGTTCGGTCGCGTTTCAAACTGAATGCAGCATTGATAGAAGTAAAAAAGAGAAGAACATGCAATACGGTCTCTAAACGAAGTACATTATTGAAGGCTTCCACACATTATCTGGACGGCAACACGTTTTTTAAGGATATTTCTGGGCATGGAGCTCCAAATAATGCTGATTACATCCAACGTAAAAAAGAAGGAGAATTTTTTCCCATGGATTTAGGGTTGGTTAGCAGTCATTATTGGACTGACAAAGACAAAAAATCTCTTGTTTGTGGTATAAAAGAACAGTTAGTAAATAGattaatagaaaagaaattaataaatgtaagatGGGAAAGTAAGGAAGATTATTTGTGCTCTtctaaattaaaagatttattagatAAAGTGGATGCTAAATTCTCAATGGATTGGTTTCAAATTTCTGCTGGGGATCTCAAACATAGACATTCTGAAACATCGTGTGAGGCAATATGGAATGTTTTACTACATCCGTCACTTAAACATTCAAAGTGGTCTGGAGAGGAAAATAATCGCCTTATAACAGCTGTACAAAagtacaattttcaaaattggGAAGCTATTGGAAATGAAGTAGGCGGTCGTTCTGACTATCAGTGTTTTATACAATACAGGAATAATGCCTGCTATAACTTACCAAATCGTTTTAAAAAATGGGATAAAAATGATGATgctaaattaattgaattagtaaataaaaataccacCAATAATGTTACTGATTGGACAGTAGTAACATCGTATTTTAGGTTCAAACCTAAAGGTGACGTTATAGCGCGTTACACCACCAGACTAAAGCCCAACATAAATCATGACTCATTTTCACCAGAGGAAGATCTCCTACTTATTGGTCTTGTTAAAAAGTATggagaaaaatttaatactatacCACGTCAAATGTTTCCCGATCGCACTATTCTACAACTACGTAATCGTTACTTAAATACCCTGAAGCATCGTCATACAAATACAACGTGGACGTACGAAGATGACAGGAAATTAGTGGAGTTCGTTTCGGAACATGGTCCATCGAGTTGGTTGCAATGTGCTAAATTGCTAGGCAACCATACACGTACTAGTTGTCGTACTcgttatttaacaattaaaaaattttatgcaaaaaatccAAATGCAAGTCTTCAAGACATACCACGGCATAGGGTTTTGAAAAGTGACAATTTGATTAGAACGGATACGTTTGAAACTCAACTTAAATTAGTAGAAACTGATCAAAccaatgtattaaaatatcagTCACTTGTAACTAAGAAGAAACGAGAAAAATCGGCAAGAATTTCAAAGAGAGACAAAGAAAAACGTTTATCTGAAACCTTGCAGTCATTGGAATCAGAAATGCATGAGCGTTTTAGGTTTGGTCATGACTACAGCGTATTCAGTACTTATTATACAAAATGGCCTTCAAGTATTTTAGCTAAAAATATTATGgcgaatactttaaaaataccTACTCCAACACTTGTAGACCATGTACTGCTATCTCGCATTCCAGTTTGTTTTCAAGAAACAGTAGCAGAGGACATGCAAATATCCAACAAATATTTAGACTGTTTGCCACCTAATTATTCATCAACAATTGGATATAGAGCACTATGTTTGTTAGGAGATATCTCTAAaacgaaaattgaaaaaaacgtGTATCAAAGTGCGGCTGTGAAACTCTTTGAAGAACGACtaaagttaacattttttagtgTTGCTATAACTTGTACTTTGAATCCCACAGAACTAAACGCAAAACCACTTTGTTTAATGAGTGAAGATGATccatatgaaaataatgaagaaaaaatcgTTTATTGCGatagatattatataatacCAACAGATAAGGTCgaaccacaaaaacaaaataatgaggTCAAGAGTAACGCaagtgttattataaataatgatgaTTGTTCCAGCTTAGCTCTTGAGGCTGTTGAAGCTGATTCGGATGAAGAacctattttgaaaaaaaagagattttctttgtag
Protein Sequence
MENSDEDDTSSDSVDESGSDIEDIEENAWTDNTTVFDSQFDTETIKIDCEQLVKNLHCLIKELPNMECGSTVKDALKLNEILIEQLENFKKLFTLQLKRVRSRFKLNAALIEVKKRRTCNTVSKRSTLLKASTHYLDGNTFFKDISGHGAPNNADYIQRKKEGEFFPMDLGLVSSHYWTDKDKKSLVCGIKEQLVNRLIEKKLINVRWESKEDYLCSSKLKDLLDKVDAKFSMDWFQISAGDLKHRHSETSCEAIWNVLLHPSLKHSKWSGEENNRLITAVQKYNFQNWEAIGNEVGGRSDYQCFIQYRNNACYNLPNRFKKWDKNDDAKLIELVNKNTTNNVTDWTVVTSYFRFKPKGDVIARYTTRLKPNINHDSFSPEEDLLLIGLVKKYGEKFNTIPRQMFPDRTILQLRNRYLNTLKHRHTNTTWTYEDDRKLVEFVSEHGPSSWLQCAKLLGNHTRTSCRTRYLTIKKFYAKNPNASLQDIPRHRVLKSDNLIRTDTFETQLKLVETDQTNVLKYQSLVTKKKREKSARISKRDKEKRLSETLQSLESEMHERFRFGHDYSVFSTYYTKWPSSILAKNIMANTLKIPTPTLVDHVLLSRIPVCFQETVAEDMQISNKYLDCLPPNYSSTIGYRALCLLGDISKTKIEKNVYQSAAVKLFEERLKLTFFSVAITCTLNPTELNAKPLCLMSEDDPYENNEEKIVYCDRYYIIPTDKVEPQKQNNEVKSNASVIINNDDCSSLALEAVEADSDEEPILKKKRFSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01404814;
80% Identity
-