Tdal001692.1
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- -
- Assembly
- GCA_002237135.5
- Location
- CM026970.3:26345274-26346487[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-09 9.7e-06 26.5 0.0 6 38 218 250 216 256 0.90 2 3 0.12 3.8e+02 2.2 0.0 27 37 286 296 282 300 0.85 3 3 4e-09 1.3e-05 26.1 0.0 8 41 329 362 323 365 0.84
Sequence Information
- Coding Sequence
- ATGAATCATTTAAAATGGATGGGTCATCTTACAaccattgaaaatatatacaaatcgtTGGAGGGTGAAGGTGACGTAGTCATAACTTCCAATGGAAGCTACCTGCGTGCTCATCGGATTGTACTCGCATCGTCCAGTGAGATGCTACGTTCTGCACTACAGGATTTGCCTCTAGGAGAAGAAGCTACCATAGTGGTGCCCGACATAAGAATTGATGTACTTCAAAACatcttacattttatatataacggAGAGTCTTGCATAATTGCTGAAAATTTATCAGAGTTTTTGCAAGCCATTAACGTGTTGGGCATTACATCGGAAGTAAGTTTCTTTCGGTCTCCCAAGGACGATACAGAAGCAAATGAAAACGAAGTAGAATTTGTAGGTGATAAAACAGCGGAGGATATTctTATTAATGAACCGTTTGGCGTTTGCATAGACTATGATGATAATTCACAAACTTCTGATAAATCTGaaagtaaacatataaaacaagaTGAAGAAGAAAGTAAAATGACAAATTTAGAAGAAGAAATGAAACTACTAACTGAAAATTACAGTCAAAATGACTCAAATGATTCGAATAGTTTAGATGAAGTGGAAGAGCCTGCAAGTGGATCAGTGCATGAAATAGTACAGAATGCCTATGATTTAGCTGTGGATGCTGTGATCTCACAAggtttaagtttgaaaaaatcGGCTGAAAAATTTGGTTTGTCTAAAACTGTTCTATGGCGACGTGTACACAAATCACCCTACTATGTGAAACCAGAACGTAATACATCGATATTAAAACAGGCATATGAACGCTTAAAAAACGGGGAACAGTTAAAACATGTTAGTCAAGATTTAAATATACCAATTTCTACACTTCACAGGCATAGATCACGTTTAATTAAAAACGGTGATTTGCCTGATAATTTAAATCATAGAAGAATCAGTAGTAGCGAAAAGAAAGACTTAAGGCAAAGGTTATTTAACGCTATGAACGTCTGCATCCATGAAGGTACTTCTCTGAATCAAACTGCAATAATGTTTGATCTTCCCAAAAGTACTCTTTGGCGACATTTGCAAAAACGCCAAGAAGCAGCAAAATTAACAATGGGAATAACAGATACCGATGTAGATGATATTGATaacaacacaaattaa
- Protein Sequence
- MNHLKWMGHLTTIENIYKSLEGEGDVVITSNGSYLRAHRIVLASSSEMLRSALQDLPLGEEATIVVPDIRIDVLQNILHFIYNGESCIIAENLSEFLQAINVLGITSEVSFFRSPKDDTEANENEVEFVGDKTAEDILINEPFGVCIDYDDNSQTSDKSESKHIKQDEEESKMTNLEEEMKLLTENYSQNDSNDSNSLDEVEEPASGSVHEIVQNAYDLAVDAVISQGLSLKKSAEKFGLSKTVLWRRVHKSPYYVKPERNTSILKQAYERLKNGEQLKHVSQDLNIPISTLHRHRSRLIKNGDLPDNLNHRRISSSEKKDLRQRLFNAMNVCIHEGTSLNQTAIMFDLPKSTLWRHLQKRQEAAKLTMGITDTDVDDIDNNTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01405042;
- 90% Identity
- iTF_01405042;
- 80% Identity
- iTF_01405042;