Tdal001693.1
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- br
- Assembly
- GCA_002237135.5
- Location
- CM026970.3:26349651-26351168[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-15 1.8e-11 44.9 0.0 5 44 318 357 315 358 0.94 2 3 0.017 56 4.9 0.0 27 37 387 397 386 403 0.88 3 3 1.8e-15 5.9e-12 46.4 0.0 2 39 424 461 423 465 0.92
Sequence Information
- Coding Sequence
- ATGAACCACCTAAAATGGATGGGACACACTTCAACTATAATGGAAATACAAAAAACTCTACATAATGATCCAGAAACCTGTGAAGTCACACTGGTTGCTAAGGGCAAATCTGTACGCGCCCATCGCTTCGTACTAAGTTCTAGTAGTGATTTACTGCGTACCTTGTTAGCTGAAATTCCCTTTGATAAAGAAGCAACGATTATTGTGCCAGAGATAAAAGGTGAACTATTGGATAGCGTACTCAGTTTCATATACATGGGCGAGGCACATGTAGGATCAGCTTATTTATCGGAGTTCCTCGAGACTATGAATTTATTAGGAGTCAAATCCGCAATAAGTTTTGAATGCAATCAAGCAAATCTTCACACCTCAGTTGGTGCGGAAATTTTGCAggttaaaaatttaacagacGTTCAAATGGAACATTGCGATCTTGTAGAGCAGgataattattcacaaaaagTTGATGAAACACAAAATGTTACTGACCCAGGACCACCGCGCGAATTAGAATTTCTTGATGTTTATCATGAACCAAACCAcaaaattacatattcaattgaGCATATACAAGGAGCAAATAATGGTGAATTTATATTGACAGGCGAAAACGGAACATTTGCTTTAGCTCAAAATCAAGATATAGACACTGGTAATGGCGAAAGTGCTGAAAAAATAGACACCGAAGAGGACGTAGAAAGCAATATAATTGAGGAATATAATAACACAGAAAATccaataatttcaacaaaaatacataacatTCCAAGAGGTTCAGCAAGCATAGAAAGTCAGTCGTCGGTAGTGCAAATCATACCCAAAggaaaaatgtacaaaatgaAAACCGATGCAGATCCAATACAAATGGAACAAACAGTAGTATCAACAACAGACTCTGTGGAAGATAAAACGATTGCAAAAACTGAGGTGCGTCGTTCAGCGGAAAGCCTAATAGATTTAGCTGTTCAGGCGGTAATTGAAGAAGGTATGAGTCTACAAAAAGCAGCTGTAAAATACGAATTATCAAAAACTGTACTTTGGCGACGAGTGCGTCTACATCCAAATTATATGAAAACTGCACGAGAGAATCCGCAAATAAAATTAGTACATGAGAGGCTTAAAACGGGCGAGTCATTGAAGAGTATTAGTCACGATTTAGACATACCAATGTCAACATTGCACAGATACAAAGTACGCTTGTCTCAGCAAGGAAGATTACCTGATTTTATTGTATGTAAAAAACGAGATCCTGGCACACGAGAGGAATTAAGAGAGAAACTTGCCAAAGCGGTCTATGCATGCATTCATCAAGGTGTTTCACAGAATCATGCCGCAAATTTGTTTGACATACCGAAGAGTACATTATGGCGGCATTTACAGAAACGAGCTCTGAAGTTAGAACAGGATCAGAATGATTCATCAGATGTTAAGGAGGAAATTATATtgtcataa
- Protein Sequence
- MNHLKWMGHTSTIMEIQKTLHNDPETCEVTLVAKGKSVRAHRFVLSSSSDLLRTLLAEIPFDKEATIIVPEIKGELLDSVLSFIYMGEAHVGSAYLSEFLETMNLLGVKSAISFECNQANLHTSVGAEILQVKNLTDVQMEHCDLVEQDNYSQKVDETQNVTDPGPPRELEFLDVYHEPNHKITYSIEHIQGANNGEFILTGENGTFALAQNQDIDTGNGESAEKIDTEEDVESNIIEEYNNTENPIISTKIHNIPRGSASIESQSSVVQIIPKGKMYKMKTDADPIQMEQTVVSTTDSVEDKTIAKTEVRRSAESLIDLAVQAVIEEGMSLQKAAVKYELSKTVLWRRVRLHPNYMKTARENPQIKLVHERLKTGESLKSISHDLDIPMSTLHRYKVRLSQQGRLPDFIVCKKRDPGTREELREKLAKAVYACIHQGVSQNHAANLFDIPKSTLWRHLQKRALKLEQDQNDSSDVKEEIILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01405039;
- 90% Identity
- iTF_01405039;
- 80% Identity
- iTF_01405039;