Basic Information

Gene Symbol
onecut
Assembly
GCA_002237135.5
Location
CM026971.3:67221834-67227067[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-37 2.3e-33 115.3 0.5 2 78 678 754 677 755 0.97

Sequence Information

Coding Sequence
ATGCCTGAAGACAATGATCTTTCACATAAGGTAATCACCGGAAGAAATCAAATGATTGAAACCACGGATAAAGGCAAAATGGTTATGGTACGAACCATACTTGAAGACATTAGTCAAACTGCTATACACTCTAATGCTTACCGTCATCAAACTAATAATCCggaacatttatttacttcaaatgATCACAATCAACACCATAATGACCATATTATGCATGAACATCCTTTACATGGCGCGGAAAGTCCAACTGTGGACTTCATTACTTCAGAAGTTACATTTGATACTTTATCAGCAGATTCTTCAAACATCTCAAATACCTTACATATTATTGACGTTAAACAGGAAAATAATAAGTatgttgtaataaataataaccacAACAGTGATTTGCATAGCTGCATAGAAGTCCCCTCAATaggaataatgaataaaatgtcTTCAGATACCGTTGAAGTTACATTGAACCAACATCATCatattcaacaacaacaagatcagCTACAATATAAACATCACTACATAAATCAACATCAATCGATTATTGCTCGTAACCAtattcaacaacaaaattcgaTTATAAATCAACGTCAGAGTCACAACTCTCGGTCTCTTCAACACTCATCATCTCACCAAGAACCTTTATCTGTTATTGTGCAACCACATGATGACTCTCATGATTCTTCAACTCAGATTTTGAGCCCAGAGTTGGGTGTAGTCGGTGTTGTGGGATGTGGTAGCTCACTCAGTGAGCCATCCACATATCAGACACTAACATCTGTGAATCAACGTTTGCAATCACCTGGATTTAGTCCAACATCATCTTATGCGACATTAACACCTTTACAACCTCTACCACCTATATCAACTATGTCTGAAAAGTTTGCTTATAGGGGTCACATTAATGGTAGCACAGTTATTAACGGTAATATTGGAAATGAAAGCAGCAGCAACTCTTCTTCTGGTGCTGTACCTTTTTCTGTGATGACACATCAAAATAGCCTTGTTGGGTTAAATTTAAGTAGCCTTAGTGGTGAACAATCACCTTATTCATCATCCTTTGATAAATTAACATCAATGGATATACCGATGTCGCCATCTCATAATTATGCAACATCGCCTACCAATACTTTATCAGGAATGGTGGTCTCGTGTGATTTGCCCCCTACTTCTCCTGTGGGATGCGAAGCACTTTCACCACAATCTGCATATAGTCCAGCAATAGAATTGCACTCTCCTACATCATCTAGATGTAAAACTAACACTTACAAAAATAAGAGTGTCCAATTACTGCAACAAGTTTCAGATAAACATATCGTGTGCTTGTCACCTGTAGAAGTATGCGATAGTAGTATATCGAATGAAAATATAGTAGTTACAGCATATCAATCTACGTACGACTCCCATCAGAGAGAAATAATGATAAGCACAACACCATCATCAAATACAGATACAAATCGACTAAGATCACATCAACTACTGCATAATAGTCCAACACTTAGTCCTCATGCAATATCTCTGAATTCGGCTTCATTGCAATCTCCCACTAAttgcaatattataaatagacCTGTGTTAAAGTTGCAATCATTAAATAACGGTTCTACAtcatctttaaataatatttgtgaaaatattgtCGAAGTTAGTGCTTCACAACAGAATCCAACAATAGTTTCGATGAGTCCGTGTCCTTCTCCATCTAATGACAACATTACCGTAAAAAAAATGGCGTTAGATATGCATGGCATTGAGAATGACAAAATCTGTGCACAATCTCATGTTAcaataaatgatttaagttGTGAAAATAATTCTAGCGAAAACCGAAGTCACCAACAAATAAAACTCAGTTCAAAACTAGAcgaatgtaatataaatacaaacgGTATGCAATCTCATAATACAAATATTGATTGTAATATTCAGAAATGTAATTTGGATGATCATAAAATAGATCAGTAtccacaaataaataacaacaatggTACTATAAACGAAAGTTTAAATGGCAGTAATAACTGTAGTGAAATGGaagaaattaatacaaaagAATTGGCGCAAAGAATTTCCGCAGAATTAAAGCGCTACAGCATACCTCAAGCAATATTTGCGCAGCGCGTACTTTGTCGTTCACAAGGTACACTTTCTGACCTATTACGAAATCCAAAGCCTTGGTCAAAACTCAAATCTGGAAGAGAAACGTTCCGTCGTATGTTTAAATGGCTGCAAGAACCCGAATTCCAGCGGATGTCGGCCTTGCGTATGGCAGCGGCTCAAATTCCTCAGAGAGGAAACCCAGCTGGTCCGATAATTACTAACACCACAGTATGTCGTCGTAAAGATGAACCACATATTGAGCACATGTCACATCCAAAGAAACCCCGTTTAGTATTTACTGACTTACAACGGCGTACACTGCAAGCAATATTCAAgGAAACTAAGAGACCTTCTAAAGAAATGCAAGTTACTATAGCTCGACAACTTGGACTGGAACCAACAACAGTAGGCAACTTTTTTATGAATGCACGTCGGAGATCTATGGATAAATGGCGAGATGATGATAGCaaacaaaatatgaacaatTCCAGTAATGGTAGTGGTAGTAAAGATCGATCTCACTCAACACTATCTTCTTGCAATCCACATTCATTAGGCATAGACGATGATATGGACTTGGGTGATTTTACTACAGATGACTGCTTCGACGATGATGATGAAATAGATGATGAAGAAAACAATGATTTATTGTGA
Protein Sequence
MPEDNDLSHKVITGRNQMIETTDKGKMVMVRTILEDISQTAIHSNAYRHQTNNPEHLFTSNDHNQHHNDHIMHEHPLHGAESPTVDFITSEVTFDTLSADSSNISNTLHIIDVKQENNKYVVINNNHNSDLHSCIEVPSIGIMNKMSSDTVEVTLNQHHHIQQQQDQLQYKHHYINQHQSIIARNHIQQQNSIINQRQSHNSRSLQHSSSHQEPLSVIVQPHDDSHDSSTQILSPELGVVGVVGCGSSLSEPSTYQTLTSVNQRLQSPGFSPTSSYATLTPLQPLPPISTMSEKFAYRGHINGSTVINGNIGNESSSNSSSGAVPFSVMTHQNSLVGLNLSSLSGEQSPYSSSFDKLTSMDIPMSPSHNYATSPTNTLSGMVVSCDLPPTSPVGCEALSPQSAYSPAIELHSPTSSRCKTNTYKNKSVQLLQQVSDKHIVCLSPVEVCDSSISNENIVVTAYQSTYDSHQREIMISTTPSSNTDTNRLRSHQLLHNSPTLSPHAISLNSASLQSPTNCNIINRPVLKLQSLNNGSTSSLNNICENIVEVSASQQNPTIVSMSPCPSPSNDNITVKKMALDMHGIENDKICAQSHVTINDLSCENNSSENRSHQQIKLSSKLDECNINTNGMQSHNTNIDCNIQKCNLDDHKIDQYPQINNNNGTINESLNGSNNCSEMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRGNPAGPIITNTTVCRRKDEPHIEHMSHPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDSKQNMNNSSNGSGSKDRSHSTLSSCNPHSLGIDDDMDLGDFTTDDCFDDDDEIDDEENNDLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01404781;
90% Identity
iTF_01404781;
80% Identity
iTF_01404781;