Basic Information

Gene Symbol
Kdm5
Assembly
GCA_002237135.5
Location
CM026972.3:61077323-61084689[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-26 5.5e-22 79.3 0.1 2 89 209 292 208 292 0.95

Sequence Information

Coding Sequence
ATGTCTACAAAACTAACAACTGCAACAGAAACCAGTCCAAATAATAATGCAGCATCAACATCATCAGCTGCATCAAATGGTAACACAACACCAGCTCGTCGTCTACGTACCCGCCATTCTACCTGTGCTAATACAAGTGTTGGAGAAtctacaaagaaaaatttaaatttgactgagcgtgtatattttataaatgattcaaATGTAAACGATGCTTCTGTGCCTACCACAACTTTTGACGAAAAGCTACCGACAAACGTAATTGGTACCAATAACAGCTCTGGAAAGAAATATCATAACAGTTGCCCACATCCGACGAATACAGTACGCAGTAAGAATCAATCACCTACACAGCCACACAGCTCTAGCACATTCAGTATGAATAAGAACGAGGGATTCAATTTTGATCCACCACCTGAGTGTCCTGTATTTCGTCCGACGGTCGATGAATTTAAGAATCCGCTAgcttatataagtaaaattcgTCCAATCGCGGAGAAATGtggtattgcaaaaattttaccaCCAGAATCATGGTCACCACCATTTGCTGTTGAtgtagataaattaaaatttactccACGTGTTCAACGACTTAATGAGTTAGAAGCGAAAACTcgtgttaaattaaattttttagatcaGATTGCAAAGTTTTGGGAATTGCAGGGCTCTTCACTGAAAATTCCAATGGTTGAACGTAAAGCACTCGATTTATATTCGTTACATAGGTTAGTGCAAGAAGAAGGTGGTATAGAACAAACGACTAAAGAGCGCAAGTGGACGAAAATCGCAAATTTGATGTCATATCCTCCTAGCAAAAGTGTAGGAGCTACACTTAAAGCGCACTATGAGCGTATTCTATATCCTTATGAAGTATATACATCTGGTAAATTAGGTCAAAGCTCCACTCCTCCAGATTCCCCTGTACCGGATGTTTCTATTAAACTTGAAGATGGAACTGATTACAAAGCACACGAAATCATAACGAGGCAGCAAATCACACCCCCGAACGAAAGTAGTGCTCGGCGTTCCAAACGTTTTGCAAATTCAAGCGCAAATTGTGGTCTTGGCGCTAATAAAGCAATTACCATTAAAACTGAGTGCAAAGATGATATCAAACCAAATCAGTGTTTAAATTACCCTGGTTGTCCGGGCACAGGAGAAGGACGTACATGTATTTGTTTTGCTAATCCTGTAGAAAAGAAATTctctgaaaataattattttgatccGTTACTTAAGTATGTGTGTAATATATGTAACCGTGGCGATGTGGAGGAATCTATGCTATTATGTGATGGTTGTGATGACAGTTATCATACCTTTTGTCTTTTACCACCACTTACAAGCATTCCTCGagggGAATGGCTTTGTCCACGTTGTGTTGTAGAGGAAGTAAGTAAACCTACGGAAGCTTTTGGATTTGAGCAAGCTGAACGTGAATATACTCTGCAGCAATTCGGACAAATGGCTGATCAATTTAAAATGGATTACTTCCGAAAGCCAGTACATTTAGTTCCTACTTCTTTAGTGGAACGTGAATTCTGGCGCATTGTATCCTCCATTGATGAGGACGTTACTGTAGAGTATGGTGCAGATCTTCACACTATGGATCATGGTTCCGGATTCCCAACAAAAAGTTCTCTTTATTTGTTACCAGGCGATCAGGAATATGCTGAATCCAGTTGGAATTTAAATAATCTTCCTTTACTTGAAGAATCAATATTAGGACATATAAATGCTGATATTAGTGGTATGAACGCACCTTGGATGTACGTAGGTATGTGTTTTGCAGCTTTCTGTTGGCACAATGAAGATCACTGGAGTTACTCAATCAATTATTTGCATTGGGGTGAACCCAAGACATGGTACGGTGTGCCTGGCAGTTGTGCTGAACAGTTTGAAGACTCAATGAAACAGGCAGCCCCTGAGCTGTTTGCTTCACAACCTGATTTACTACACCAACTTGTCACAATTATGaatccaaatattttaatgaacaaTGGTGTGCCTGTTTACCGCACTGATCAAAATGCTGGCGAGTTCGTGATCACTTTTCCGCGTGCCTATCATGCTGGTTTTAATCAAGGTTACAACTTCGCAGAAGCTGTAAATTTCGCTCCAGCAGATTGGCTTAAAATGGGACGTGAATGTGTTAACCATTATTCGATGCTGCGTCGCTTCTGTGTATTCTCACATGATGAGCTTGTTTGCAAAATGGCTTTAGAACCTGCAAAGCTTACTTTTGGCATAGCTACGGCGTGTTACATTGACATGGCAGAGATGGTCGACTGCGAAAAACGATTACGCAAATCTTTGTTAGATTGGGGAGTCACTCGTGCTGAGCGCAAAGCTTTTGAACTTATACCAGATGACGAACGCCACTGTGGTGAATGCAATACAACTTGTTTCCTTTCAGCCGTGGGTTGTGATTGTACCAAATCAATAGTATGTTTGCGTCATTTCACTGATCTTTGTCATTGCACACCCGATAAACATACATTACTCTATCGGTACACTTTGGATGAGATGCCGCTTATGCTGCAAAAGTTGAAATCAAAAGCACAGAGTTTTGAACGCTGGCTTTCCCGATGTCGTGATATTGTGGATGCGAGTACGCCTACTTCGGTTACTCTTGCGGAACTTCAAGAATTATGTAAAGAAGCTGAAGTCAAAAAGTTTCCATCCTCGTTGTTGATTGATCGTTTAAAAGCAGCTGTAGTTGAAGCTGAAAAATGTGTTACTGTTATACAACAGCTTGGCATCAATAAGgtGCGTACACGATCCGATAACGTGGAACAGGCACATTACAAACTCACAATGGAAGAATTGGAGTTATTTGTTCAAGAAATTGACAATCTTTGCTGTATAATCGAGGAAGGTGTATCGGTACGTGAGTTATTGGTATTGGGTAAGCATTTTGTGGAACGAGCAAATGCTTCACTTGAATGTGGCTTGGACAAGTTGGAAGAATCTGAACTTGATGGGCTTATAATTGAAGGAAATTCTTTGCGTATTGAACTTCATCAAATGAACTATCTTAATAATCGAATTAAGCAATTGAGATGGTACAAAAAATCGATCAGCTTACTCACATCTAGCACAAAACCTTGTTATGCTGATATAGTATACTTATTAGATTTAGCGAATGCAGAAGTTGTACCGGATGACCCCTTCATAGataaagaaattcgaaaattACAAGAAATCGGAGCGTCAATCGAAGCATGGGAGCAACAAGCCaatcaatattttcttaatgtaATGCAACAGCATCATCTTTTTGAAGTAGAATGTTTTCTTAAAACAGCTAATAATATTGATGGACAAGTGCCGACATATGTCAAACTGAAAGATGCCGTACGTAAGGCTAGAGAGTGGTTGCGTTCAGTTGAATCATTACAAACTAATGACCACTTTCCGTATTGTCATACCCTCGAAGCAATAGTTCAGCGTGGTTGTAGTATTCCAATTCAGCTCGAAGAGTTATCTCGTATTGAGGATCATTTAAAACGTGCACATGAATGGAAAGAAAATACAGCGCGTGCATTTCTTAAAAAGCAAACATTTTATACTTTACTGGAGGTACTGATGCCCCGTGCCGAACCAGTGATTATAGATTCAGATTTAAAAAAGCCATTTAAAGATGACTTCGTCAAAGAAATGAGTCCAGCGCAGATTGTGGAATCATTCAAATGTGCagaagataaagaaataaaagatatgCGTGATCTTCGTaaacaaaatatgataaaaagtcCATTAAGTGATCAATACTGCCTCtgtaaaacacaatttaaagATGTTATGTACAATTGTCAGCTTTGTCGAGACTGGTTTCATGCCGGTTGTGTACCGTCACCACATACAACTATAGGCGCAACAGCTGgttttaatggaaaattaaagTGGTTATGTCCTTCATGTGTGCGTTCTCGGCGACCACGTCTTGAAACTATTTTACCATTACTTGTATCGTTACAAAGTCTGCCAATACGCTTACCAGAAGATGAGGCTCTACGATGTCTTGCAGAAAGAGCAATGAATTGGCAAGATCGCGCACGTAAAGCGCTTTCTAGTCCCGATGTTACTGCTGCTGTAGAAGCAATCAGTAATTCACAGCGGAATAAAACAATAAGACGCAAACCCGGTAATTCTGCACTGCTAGGTATCCGCAAACAGAGACGTAATAGCCTGCAAAATACAAAAGATGTAACTGACAATGATACAGATGATGATGACGATCGGCTGCATATTGTAGAAGATGCGCTTAGTAATGACGAAGAAGTCGTTGTAGAAGAAGCTTATAACATTGAGTTTCAGAAACTACTATCAGGTAGTGAAACTGATAATTTGGCTGAATTATCAATGGAAGGTGATTTGCTTGAAGTATCATTAGATGAGTCACAAGAATTGTGGCGTCTATTATCCGCTGTGCAGCCAACAAAGACAACAGAAGCAGCCACACTTGTAGAGCAACATCAAATAAAGCAGAAAAACATGCAATCTATATCTAATGCAAACTCAGCAGCAGAAGATTCGAACGATAGTTTGCAGGTACAAAGCAGTCCAAATAGCAATAGTGGCAGTGCTTCAGGCCGCAATCATACTACAGTCAAAAAACGTCGCACAATCGATCCTGTGACTGGCTGCCCTGTACCACGAAAAAAGACGACTTCCTCACTAACCAAACAGGGTGCAAACTCTACACAGAAAAAAGTTGGGCGCAAGTCTGATCTTAGCAAACAGATCTTGGATGACAATGCAGAGAATTTTACTCCAACAAAATCAACGAATGATGGAGTTGCTGGTGCAACAAACGCACAAATTTCATCACAAAAGAAACGCAAACGCATGGGAAACAATATTGTAGCAAGCGGGCAGAAAAAATCTCAGCAACGTACACAAACGGCCTATCAGGACGACGATGAAGAGGAGTGTCGCGCAGAGAATTGCCATAAGCCAACTGGTCGTGAAGTTGATTGGGTGCAATGCGATGGAGGCTGCAATGAGTGGTTCCACATGTTTTGTGTCGGCCTTAATCGAAATCAAATCAAAGCGGATGACGATTACATATGTGTGCGCTGTTCAAAGGCGACTGTGGTGTCGCCGAGAGTCGCTGCAGCGAATATAACAGCCGCAGCAGTTAGTGGCGCTAATGTTGTGACATTaagtaacaacaataacaataaaaataatgcaaatagcAATACAATCCAAACACACGCAAGTCTGCCGGCAACAAGCGCTGCAACAAATATTCGCAGCGGGCGTACGCAAACAGCTCggtaa
Protein Sequence
MSTKLTTATETSPNNNAASTSSAASNGNTTPARRLRTRHSTCANTSVGESTKKNLNLTERVYFINDSNVNDASVPTTTFDEKLPTNVIGTNNSSGKKYHNSCPHPTNTVRSKNQSPTQPHSSSTFSMNKNEGFNFDPPPECPVFRPTVDEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRLVQEEGGIEQTTKERKWTKIANLMSYPPSKSVGATLKAHYERILYPYEVYTSGKLGQSSTPPDSPVPDVSIKLEDGTDYKAHEIITRQQITPPNESSARRSKRFANSSANCGLGANKAITIKTECKDDIKPNQCLNYPGCPGTGEGRTCICFANPVEKKFSENNYFDPLLKYVCNICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPRGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTSLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEDSMKQAAPELFASQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDCEKRLRKSLLDWGVTRAERKAFELIPDDERHCGECNTTCFLSAVGCDCTKSIVCLRHFTDLCHCTPDKHTLLYRYTLDEMPLMLQKLKSKAQSFERWLSRCRDIVDASTPTSVTLAELQELCKEAEVKKFPSSLLIDRLKAAVVEAEKCVTVIQQLGINKVRTRSDNVEQAHYKLTMEELELFVQEIDNLCCIIEEGVSVRELLVLGKHFVERANASLECGLDKLEESELDGLIIEGNSLRIELHQMNYLNNRIKQLRWYKKSISLLTSSTKPCYADIVYLLDLANAEVVPDDPFIDKEIRKLQEIGASIEAWEQQANQYFLNVMQQHHLFEVECFLKTANNIDGQVPTYVKLKDAVRKAREWLRSVESLQTNDHFPYCHTLEAIVQRGCSIPIQLEELSRIEDHLKRAHEWKENTARAFLKKQTFYTLLEVLMPRAEPVIIDSDLKKPFKDDFVKEMSPAQIVESFKCAEDKEIKDMRDLRKQNMIKSPLSDQYCLCKTQFKDVMYNCQLCRDWFHAGCVPSPHTTIGATAGFNGKLKWLCPSCVRSRRPRLETILPLLVSLQSLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVTAAVEAISNSQRNKTIRRKPGNSALLGIRKQRRNSLQNTKDVTDNDTDDDDDRLHIVEDALSNDEEVVVEEAYNIEFQKLLSGSETDNLAELSMEGDLLEVSLDESQELWRLLSAVQPTKTTEAATLVEQHQIKQKNMQSISNANSAAEDSNDSLQVQSSPNSNSGSASGRNHTTVKKRRTIDPVTGCPVPRKKTTSSLTKQGANSTQKKVGRKSDLSKQILDDNAENFTPTKSTNDGVAGATNAQISSQKKRKRMGNNIVASGQKKSQQRTQTAYQDDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRNQIKADDDYICVRCSKATVVSPRVAAANITAAAVSGANVVTLSNNNNNKNNANSNTIQTHASLPATSAATNIRSGRTQTAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-