Basic Information

Gene Symbol
tfcp2
Assembly
GCA_002237135.5
Location
CM026971.3:56709616-56724010[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.5e-51 1.4e-46 159.9 0.8 22 186 199 360 181 372 0.90
2 3 5.7e-14 8.7e-10 39.6 0.1 185 221 395 431 386 433 0.89
3 3 1 1.5e+04 -3.7 0.0 26 64 672 710 661 717 0.69

Sequence Information

Coding Sequence
atgggTGTGCGTGATTGGGCAAATGGTGTATCAGAAGGAGAAAAATGGAACGCATTGGTTATAAGTTATGATTTACTAATTTCAAAAATGCCGGTAGAAGATAGGAAAGTAAAGAAAGTAAAGAACAATGGTCGCGGTAGTTGGGCCGATGATATAGGATTCGATTTAAATGCAGAATTTAATAGCAACTCATATCTTAATAATGAATTTTTGTCGTTCTCTCCTAACCTGACCGTGCTTAAACAAGAGCCTCAAACTGAGCAATTAAAGGTGAACAAAAGTCTATTGAACTCAAACACTGTTGGGAATATATCAAAGACCGACAAATCAACTTCAGCAGATGATCCAACATTAAATAATCAAGATCAAACAAAAAATGAGGTGAACGACAAATCGTGCAGTTGTGGCTCGCCCCAGAGTACGCAACAAGGTTTTGAACAGAACTTGACAATTGTCGATAAGCGTATCAATGACGTTCCAGATTTTGACAACAGCAATGCACCAAGCGCTGAGAAAACACAAtCACAGAGCAATGTCGTCGTTCAGCAATTAAGTGTAATTGATGCCAATAAAATTGAGAACTTACCAATTGCCACAACTAATTCTGACGATCACAAatTTCAGTACATTTTGGCAGCAGCAACGTCTATTGCAACCAAAAATAATGAGGAGACCCTCACTTATTTGAATCAGAGTCAAAgctatgaaataaaattgaagaaaatcgGAGATCTTTCTTACTATCGGGATAAGATTCTAAAGAGTGTTATAAAGATTTGCTTTCATGAGAGACGTCTGCAGTTTATGGAGCGTGAACAAATGCAACAATGGCAAGCATCCCGTCCTGGTGAACGTATCATTGAAGTTGATGTACCGCTTTCATATGGTCTGTGCCATGTATCACAGCCCTTGAATCAAAGCTACTTGAATACTGTTGAAATATTTTGGGATCCATTGAAAGAAGTTGGTGTCTATATAAAGGTTAATTGTATTTCTACGGAGTTTACAGCAAAGAAACACGGCGGCGAAAAAGGTGTACCATTTAGATTACAAATTGAAACTTACATTGAGAACCCGAACGGTTCTTCTAATAATCAAACTGCTGCTACGCAAGCATCACCAAACGGTCCAGCAGTATCTCCAAGCCCTAGCGGCACTTTAACTCCaacaaataacttattagtTGGCATGAAACAGCCAGTTCATGCTGCAGCTTGTCAAATTAAGgtttttaaattaaaaggcGCTGATCGTAAGCATAAACAAGATcgtgaaaaaattcaaaagcgTTCTCCATCGGAACAAGAGAAATTCCAACCAAGCTATGAATGTACAATCATGAATGATATTCCGCTCGATTTAATTACATCATCAGCTGGTTGCTACAGTCCAGAATATATGAAAATTTGGCCGAATTCACCAGTACACATTCCGAAATACGATGGAATTCTACCATTTACAAGCTCATCACCAGCAACTGCCAATTCAAGTCCAATTCAAGTTACTTCAACCAATTCACCATCACTTAAGCTAATGGAGGCAAACATGGTCTCACCACAGCAGGTGACATCGGAGGTTGAAGAATATactaCAAACATTACTCCTGAAACTACTCCAGTACAAGTTACTCAATGGCTTACAAATCATCGTTTAACTGCTTATCTTACAACATTTACCCACTTCTCTGGGTCTGATATCTTGAGaatgtcGAAGGAGGATCTAATACAAATATGTGGCCTTGCAGATGGAATTCGCATGTTTAACATACTTCGTGCAAAAGCAATTAAACCACGCCTGACAATTTACGTTAGCATTGATGGCCATAACTATAATGCAATCTATTTAATAGCAAATACCTCTAAGGAATTAACACAGAAGCTTGTTAAAATTCCGGGCTTTTATGAAATGGTTGCCAACTCACCACCCAATAACACATTGGAAAATGGTGCCTTGTACAATAACTGGAGCATGCACTCAAAATACTCTGGCAGTGGTTCCAATATATTCAATGATgccaataaaaactttatatacgtGGTCGGCCCATCCGGCATACACGTGACCGTGACCGATGAAGTCCTGAACAATGAAATCAACGATGGCAGTCTCTATGCCCTCGAAGTACAAAGTGGAAAAGTTGTTAtgaaatttatcaataagaatGAAAACTAA
Protein Sequence
MGVRDWANGVSEGEKWNALVISYDLLISKMPVEDRKVKKVKNNGRGSWADDIGFDLNAEFNSNSYLNNEFLSFSPNLTVLKQEPQTEQLKVNKSLLNSNTVGNISKTDKSTSADDPTLNNQDQTKNEVNDKSCSCGSPQSTQQGFEQNLTIVDKRINDVPDFDNSNAPSAEKTQSQSNVVVQQLSVIDANKIENLPIATTNSDDHKFQYILAAATSIATKNNEETLTYLNQSQSYEIKLKKIGDLSYYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNQSYLNTVEIFWDPLKEVGVYIKVNCISTEFTAKKHGGEKGVPFRLQIETYIENPNGSSNNQTAATQASPNGPAVSPSPSGTLTPTNNLLVGMKQPVHAAACQIKVFKLKGADRKHKQDREKIQKRSPSEQEKFQPSYECTIMNDIPLDLITSSAGCYSPEYMKIWPNSPVHIPKYDGILPFTSSSPATANSSPIQVTSTNSPSLKLMEANMVSPQQVTSEVEEYTTNITPETTPVQVTQWLTNHRLTAYLTTFTHFSGSDILRMSKEDLIQICGLADGIRMFNILRAKAIKPRLTIYVSIDGHNYNAIYLIANTSKELTQKLVKIPGFYEMVANSPPNNTLENGALYNNWSMHSKYSGSGSNIFNDANKNFIYVVGPSGIHVTVTDEVLNNEINDGSLYALEVQSGKVVMKFINKNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-