Basic Information

Gene Symbol
St18_1
Assembly
GCA_011170035.1
Location
BLKR01009215.1:19265-28181[+]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-13 5.8e-09 38.9 3.2 1 22 902 923 902 925 0.94

Sequence Information

Coding Sequence
ATGGCTACTACACCAAATCGCGACTGGCGCCAGAGGTGCGCAAAGCGACAGCAGACGAGGAGGACGGAGAGGGCGGAATTTGTGAATGCGGCGCTTCGCCGGCGGAGGGACCTGCTAAGCTTCAATTTCGTTAACTTGTCCAATtcctctctgccgccgccgcctccgcgctgcccttgtccctttcccttccctcctttgcacctcctccctcgccctcgctccggccgcccccccccctccctcgaCCCCGCTCCACCTCTGCGATCGCACCAGGGCACCTTCATTGTTCTGCCTCACCCGTCTCCTGACCAAATCTTCCTGACCCATCCTCACCTTGGCATTCTCTCTCTTACGACATCCCTAATTTATCTGTCCTCCACTTTCTCTATCCCACTTGCCTCACCTCACATCCCTCACACCACTCTTCTTCACACCACACTCACAAGCCACTCACCCACTTGTTTTAGATCCCCCGCTTTCCTTACACGCATCTCTCGCACACGCACCCCCACTCTAAATACACACAcgcctccacacacacacacacacacacacacacacacaatcggcGCCCACTTCCCGTTCTCCCTCACACCCCGGGCAAATCCTCGAGACGTCgggcacgcacacacgcactctCGGCTTACTCACACGCGCTCACGTTCACGCACACACCTTGCGGGCCCATTTTTCGCGGCGTCTGCTGCCGCTGCTCCTGCGCAACCTTTTCCTAATTTGACGCGTTGgaggcgggcgccgcgacgcgcgcggAGCCAGGGGTGGCGGCGCGGCCTCGCATCCGGCCCTATCGGCCGTGCCACCTGCGCCCTGCGCGAAGTGCTCTTCTTCTCGCTGGGTTCTTGCGCCTCACTTGTCCGCTCAGCTTTTTCACCacccccctctcccaccccaccccccatcCACCCGCCCGCTTGTGGTCGACCAGTACCTGCGCCGGACACGCTCGTCCATCTGTCGCCGACCGCCGGTTTCTCACAACTCtctgcccccgccctctcccaccccctTCCACCCCTGCTAGGTAGGTCGGCCAGCATCCGCCCGCCGGTTCGCAACTCGGAGAGGGTTGCTAAGTTCTCGCACAAGAACGCGCTCGGCCAGCTTGCACCGAAGGGGAGGGAAAAAGTTGCGCGGAGGCTGACCAGCTCTCGGACCTCGCGGCGTCTTGGCTCTTCTTGTGGCAGAGGTAATATCCCAGATGGCCACCTGGCGGCGTCcgggcccggcgcccgccccgccccgccgcgccgcttggGAGAAATCTTAAGTTCGCTCTCTTGCGCGGAGTCTTCATTACGCGCCCCGCGACTCATGCAGACTTCCTTCGCTTGCTTACAACACGCTAGTCCTCTACCAGCGGAAGGACTGGGAAAGGGCGTGCGTTGCGCTCCAAGCTACCATCCCgtccccgcaccaccccgcccccacccgcccacgccccgccccgcccaccccccaccccgtccccgcccaccaccgccccgtccccgcccggcgccgctccatccccgcccccgcccccgccccgcccggcgccagTCATGTCCGCGCTTCTCGCccgcgcgtggcgtcgcgtcgcgtcgcgccgcgccgcgccgtctgggCTGCACCtccggaggcgggcgggcgggcgagcgggcgggcgccgggggcgagacgccgcccccggccggccccggcccgccgcccccggcgcgcccgccgccgccaccgccgccgctgccgccgcccccgcccccgccgttcgCGGCGAGGGCGGAGCCTGCGACTGATACTGCCTTCTCGTCCCACAGCTTCGCGCGGGCATGGGACGAGCTTCTTCGAATCGTAGATCCCTTTGTACCCCGACTCCTGACTTTTCCCTCTCGTCGTCTACCGTTTGCTGCCCTCGCCAGCCTCTCCCAAgacgcctgcgccgccgccgccatttccTTGCCTCTCTCCGGTGGATCTGCGATGCTTGCTGCTCTGCATCGGCCCAGCTCTCTCGCCCCGTCCCTTACCGCCTCGCCCttgccgctccgcgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccccgccgcgccgctccacgccgcgccgctccgcttcgTTCTAAGCAGCAACCAACGGGCGTATACTTCGCGAGAGCCCTTCAAGGGCCACTCGCCAAGCTAATTATGGCAGGGCGAAGCTGTAACGTAATTCCTCGCGTGCACCCCGTCCCTGCCCTCTGCCTTCCCGgcttcttcccttcccttcccttctcttccccgccctcttcctcgccgtcttcctctctcactctcctcCCCGCATGCCCTTCCCCCGTGCACACCGTCCCTCCGCCCCGTCACGACCTGTCCCGCGTCCGTCACGACCTCTCCGAAGCGCGTCCGAGAGCGCGgggccccgctcctcccccgcaccgccccgacGCGCGCGTCTGTCCGTCCGGTCGCAGTGCGATGCGCGCGCGGGTGGTGGGCCCGccgagcggcggcgccggcgccggcggcattggcggcggcgtcggaggcggcggcgccggcggcggcggcggcggaggcggcggcgggccctTCGGCCTggcgcggcccgccccgcgcggcaGGGACGGGAAGGAGCTGATACAGTGCCCCACGCACGGCTGCGATGGCATGGGTCATGTGTCAGGGAACTATGCTACCCACAGAAGGCAAGACCCCCCTCAGAAGGCTGTCCGTCCCCCTATACTCTGTCTGCGgaccccccggcccgcccccctcTCAGAGCCTGTTTTACACTCCGCGACGTCGTCTCGCGCGGCTGcggctctctctcgctctcactctcactcttcactctctcacgctctctcactCTGA
Protein Sequence
MATTPNRDWRQRCAKRQQTRRTERAEFVNAALRRRRDLLSFNFVNLSNSSLPPPPPRCPCPFPFPPLHLLPRPRSGRPPPSLDPAPPLRSHQGTFIVLPHPSPDQIFLTHPHLGILSLTTSLIYLSSTFSIPLASPHIPHTTLLHTTLTSHSPTCFRSPAFLTRISRTRTPTLNTHTPPHTHTHTHTHTIGAHFPFSLTPRANPRDVGHAHTHSRLTHTRSRSRTHLAGPFFAASAAAAPAQPFPNLTRWRRAPRRARSQGWRRGLASGPIGRATCALREVLFFSLGSCASLVRSAFSPPPSPTPPPIHPPACGRPVPAPDTLVHLSPTAGFSQLSAPALSHPLPPLLGRSASIRPPVRNSERVAKFSHKNALGQLAPKGREKVARRLTSSRTSRRLGSSCGRGNIPDGHLAASGPGARPAPPRRLGEILSSLSCAESSLRAPRLMQTSFACLQHASPLPAEGLGKGVRCAPSYHPVPAPPRPHPPTPRPAHPPPRPRPPPPRPRPAPLHPRPRPRPARRQSCPRFSPARGVASRRAAPRRLGCTSGGGRAGERAGAGGETPPPAGPGPPPPARPPPPPPPLPPPPPPPFAARAEPATDTAFSSHSFARAWDELLRIVDPFVPRLLTFPSRRLPFAALASLSQDACAAAAISLPLSGGSAMLAALHRPSSLAPSLTASPLPLRAPPRPAPPRPAPPRPAPPRPAPPRPAPPRPAPPRRAAPRRAAPLRSKQQPTGVYFARALQGPLAKLIMAGRSCNVIPRVHPVPALCLPGFFPSLPFSSPPSSSPSSSLTLLPACPSPVHTVPPPRHDLSRVRHDLSEARPRARGPAPPPHRPDARVCPSGRSAMRARVVGPPSGGAGAGGIGGGVGGGGAGGGGGGGGGGPFGLARPAPRGRDGKELIQCPTHGCDGMGHVSGNYATHRRQDPPQKAVRPPILCLRTPRPAPLSEPVLHSATSSRAAAALSRSHSHSSLSHALSL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-