Tocc077005.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Teleogryllus occipitalis
Gene Symbol
Znf784_1
Assembly
GCA_011170035.1
Location
BLKR01002342.1:13754-94104[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.056 41 7.9 1.8 1 23 8 30 8 30 0.97
2 20 9.3e-05 0.067 16.7 0.3 1 21 36 56 36 57 0.97
3 20 0.043 32 8.3 2.1 1 23 77 99 77 99 0.98
4 20 2e-05 0.015 18.8 1.6 1 23 105 127 105 127 0.99
5 20 0.00025 0.18 15.3 0.2 1 23 148 170 148 170 0.99
6 20 9 6.5e+03 1.0 0.4 1 10 176 185 176 186 0.85
7 20 0.016 11 9.7 5.3 2 23 188 209 187 209 0.97
8 20 0.00039 0.29 14.7 2.5 1 23 215 237 215 237 0.98
9 20 0.63 4.6e+02 4.6 0.2 6 23 251 268 249 268 0.90
10 20 0.07 51 7.6 0.1 1 20 274 293 274 293 0.95
11 20 6.4e-05 0.047 17.2 6.2 1 23 315 337 315 337 0.99
12 20 0.83 6e+02 4.3 0.4 1 16 343 358 343 360 0.88
13 20 0.0011 0.81 13.3 1.9 1 23 375 397 375 397 0.99
14 20 0.001 0.76 13.4 3.3 1 21 455 475 455 476 0.95
15 20 3.5e-05 0.026 18.0 3.0 3 23 620 640 619 640 0.97
16 20 0.0073 5.3 10.7 6.3 1 23 675 697 675 697 0.99
17 20 7.4 5.4e+03 1.3 0.2 1 10 703 712 703 714 0.82
18 20 1.3e-06 0.00097 22.5 1.9 1 23 727 749 727 749 0.99
19 20 0.0048 3.5 11.3 0.3 1 21 755 775 755 776 0.97
20 20 0.003 2.2 11.9 8.1 1 23 791 813 791 813 0.99

Sequence Information

Coding Sequence
ATGGAGCCGCGGGACGGCCGTTTCCAGTGCAGTCACTGCGGCTACGCCACCAACTGCCCTTCCGTCTGGGCCAcgcaccagcgcgtgcacacgggggagaagccttacaagtgcactTTCTGTCCCTTCTCTGCGTCGCAGCTCAGCAACTTAAAAGTGCACATGCGGGGTGTTCGCGCGGGGCCTGCTCTGCGCGGGATGGCGTCTGGGGCGATGCGGGGCAACCGCTTCCAGTGCAGCCACTGCAGCTACGCCACCAATCTCTCCTCTCGTTGGACACAGCACCAGCTCGTGCACACTGgagagaagccttacaagtgcacaGTTTGCGCCTACGCTACAACGCGTCACAGCAACTTAATTGCGCACTTGCGAAAACACACTGGAGAGAAACCGTCTgcgcggcgagggacggcgacaaTGACGCCGCGAAGCGGGCGTTTCCAGTGCAACCTCTGCGGCTACGCCGTCAACGACTCCTACCGTTGGGTCCGTCACCAGCGAGTGCACACGGGGGAGAAGCCTTACCAGTGCACGCTCTGCCCTTTCTCCACCCGCCTCCGATGCAGCCACTGCTGCTACGTCACCAATGACTCCTCGAATTGGACCAGGCACCAGCGGATGCACACGGGCGAAAAGACATACACCTGCATGGTTTGCACCTACGCTACAAACCATCGGGACTCCTTGAGGAGGCACATGCTTCAACACACTGGGGAGAACCACGGAGCGTCCGCTTTCAATGCAGTCTGTGCCTACGCCAGCAACAACTCCTATTGTTGGACCaggcaccagcgcgtgcacactGGGGAGAAACCTTACAAGTGCCCGGTCTGCCCCTGCGCTACAGCGGCTTCGACCAACTTAAGTGTCCACAGGTGGGGTGTCCCTGCGCGATCTGCGCTGcgcgggacggcgacggtggcgccgcggggcggctgCTTCCAGTGTCACCACTGCGGCTATGCCACCAACAACTCCTGCTCTTTGGCGAGACATcagcgcgtgcacacgggcgagaagccttacaagtgcacgCTGTGCTCCTACTCATCGTCGCAGCTCGGCAACGTCAAATCttcgcggcgcgggacggcgacggtggcgccgcggggcggccgcttccagtgcCACTATTGCGGTTTCACCGCCAACGATTCCTTCAAGTGGGCCTcgcaccagcgcgtgcacacgggGGAGAAACCTTACCAGTGCACGCTCTGCCCttttcgtcgTCGCCACGGCTGGCCCGCGGGCACGGCTGGCCCGCGCTGgatgttgcccactgccgccaggggcgGGTTTGTTCGAGGAATATCTGTGCTGCGCGGGACGGCGATGGTGGCGCGACAGGGCGGCCGCTTCCGGTGCAGCCATTGCAGCTACTCCACCAACAACTCCGCTCATCTGACCACGCACCAGCTCAAGCTCCCGCAGCAGGCCTCGCCGGATGCGCTCAGCTGGTTACCTGCTCCCGCGACGGACTGCGCGCGGGTGATCGAGGTTCTCGTCCACCTGCGTGGCGGTTGGCTGGACGATCGGCCAATCCGGCAACGGGTCTCGTGGGTGGGGAGGAAGAAGGAGTCCGCCCTTGATCAGGCGTCATGGGGCAGCTGGAACAAAGTCCTGACGCGGACGAGCAACGCGGTTTATAGACGTTTTCAACAGATGTTTCCACGACTAGTGGAGACGTCTGATGCCCGgccgcttcccgccgccgccgtctggcgCCACTTTAGGCGCGCTCCTCAAACTTCTCACACAGCCGCAACATCTAGGACATTCCGACTTTGTTCCAGCTGCCCCATGACGCCTGATCAAGGGCGGACTCCTTCTTCCTCCCCACCCACGAGGCCCtgcCACCACTGCGGCTACGCCACCAACAGCTCCTCTCAATGGACCCGGCACCAGCGTGTGCACACGGGAGAGAAACCTTACAAGTGCACGGTTTGCGCCTACGCTTCCACGCAACTCTGGCGCGcacggcgtgggacggcgacggtggcgctgcgcggcggccgcTTCCAATGCAGCCACTGCAGATACTATACCAACTACAATTCTCATTGGGCAAGACACCAGCGCGTGCACACAGGGGAGAAGCCTCACAAGTGCACTGTCTGCCCGTACGCTACGGCAAGGGGTGCACGGACTGGGCTGGCGGCGCGTTgcggccgcttccagtgcagccACTGCGGCTACGCCACCAATGACTCCTCTAATTGGACCaggcaccagcgcgtgcacacgggcgagagACCCTACAAGTGCACGCTCTGCCCCTTCTCTGCGTCCCTGCTCTTCAGTTTAAAGCGACATATGCGGGGTGCGCGGtgcgggacggcggcggtggcgccgcgcggcggccgaTTCCAGTGCTGCCACTGCAGCTACGCCACCAACAACTCTTCTCATTGGACCAagcaccagcgcgtgcacacgggcgagaaaCCTTTCAAGTGCCCGCTGCTTTGTATTCCACCAACCGCGAAGACGAAGGGCGTACCCCACACCCCCGCGTAG
Protein Sequence
MEPRDGRFQCSHCGYATNCPSVWATHQRVHTGEKPYKCTFCPFSASQLSNLKVHMRGVRAGPALRGMASGAMRGNRFQCSHCSYATNLSSRWTQHQLVHTGEKPYKCTVCAYATTRHSNLIAHLRKHTGEKPSARRGTATMTPRSGRFQCNLCGYAVNDSYRWVRHQRVHTGEKPYQCTLCPFSTRLRCSHCCYVTNDSSNWTRHQRMHTGEKTYTCMVCTYATNHRDSLRRHMLQHTGENHGASAFNAVCAYASNNSYCWTRHQRVHTGEKPYKCPVCPCATAASTNLSVHRWGVPARSALRGTATVAPRGGCFQCHHCGYATNNSCSLARHQRVHTGEKPYKCTLCSYSSSQLGNVKSSRRGTATVAPRGGRFQCHYCGFTANDSFKWASHQRVHTGEKPYQCTLCPFRRRHGWPAGTAGPRWMLPTAARGGFVRGISVLRGTAMVARQGGRFRCSHCSYSTNNSAHLTTHQLKLPQQASPDALSWLPAPATDCARVIEVLVHLRGGWLDDRPIRQRVSWVGRKKESALDQASWGSWNKVLTRTSNAVYRRFQQMFPRLVETSDARPLPAAAVWRHFRRAPQTSHTAATSRTFRLCSSCPMTPDQGRTPSSSPPTRPCHHCGYATNSSSQWTRHQRVHTGEKPYKCTVCAYASTQLWRARRGTATVALRGGRFQCSHCRYYTNYNSHWARHQRVHTGEKPHKCTVCPYATARGARTGLAARCGRFQCSHCGYATNDSSNWTRHQRVHTGERPYKCTLCPFSASLLFSLKRHMRGARCGTAAVAPRGGRFQCCHCSYATNNSSHWTKHQRVHTGEKPFKCPLLCIPPTAKTKGVPHTPA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-