Tocc022137.1
Basic Information
- Insect
- Teleogryllus occipitalis
- Gene Symbol
- bab2_1
- Assembly
- GCA_011170035.1
- Location
- BLKR01000322.1:295683-308353[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-12 2.1e-07 33.6 0.0 1 39 509 548 509 552 0.90 2 4 6.8e-14 3.7e-09 39.2 0.1 1 39 563 601 563 604 0.95 3 4 1.9e-17 1e-12 50.6 0.0 1 45 618 663 618 663 0.97 4 4 2.3e-20 1.3e-15 59.9 0.1 1 43 670 713 670 714 0.97
Sequence Information
- Coding Sequence
- ATGGCGGGGCAGCACTACTGTCTGCGCTGGAACAACTACCAGTCCAACATGACATCGGTGTTCCACCAGCTGCTCCGCAACGAGGCGTTCGTGGACGTGACGCTGGCCTGCAATGATTCGTCGCTCAAGGCCCACAAGGTGGTGTTATCAGCCTGCTCCTCCTACTTTCAAAAGCTTTTAATGGAGAACCCTTGCACTCATCCCACCATCATTATGCCCCAAGATGTGTGCTTCAGCGATCTCAAGTTTATTATAGAATTTGTCTATCGAGGGGAGATTGATGTGTCACAAGCTGAATTGCAGTCACTTCTCAAGACTGCTGACCAACTGAAGATCAAGGGCCTTTGTGAAGTGCCTGATGGAAAAGATGGTGGCCCAGGAATTGGATCTGCAGAGGTGACTCCTTTGCCTATATTGTCCCGACGATCCTTCACCAAATTACGGCGTCTCTCTGGAACAAAACGCCAACGTCCTGATGCAATGGTGCGGAGGGGAATATTCAAAGATGGAGATCATCCTCCTCATCCCATTCACCAgctgcaacaacagcagcagcaacagcagccgcAACAGCACCCACAGCACatgcaacagcagcagcagcagcagcaacaacaacagcagcagcagatgcaacaacagcagcatCAACAGATGCAGCAACAGGCTttgcaacagcagcaacaacaacagcagcagcatgtTCAACAAGTACAGCAAGTTCAAGCAGTCCAAGTTGCACAAGCACAACAGCAGGCAGCCCAACAGGCTGCACATCAGGCTGCTCAACAAGCAGCAGCTCAACAAGTGGCAGCCCAACAGGCTGCCCAGCAGCAAGCACAGGCAGCAGCTGCCCAGCAGCAAGCACAAGCTCAGCAGCAAGTCGCACAAGCCCAACAGCAACAGCAGATGGTGGCTCAACAAGTGCCACAAGGCCCTAATGGCCAGCCCATGGAGATGGGGGCAGTGTCTGCTGCTGAGATGGCTCAGCGCTCAGCAGTTGGGCTTACTGAGCGTGTGCCTGAATGTGTCACTGTGGCAACATCCACTGAAGATGACCATGATATGCCCGTTGTTGTTCTGGAGAGCAAGATATCACCCTCCCACCTGGCTGCATCCTACGTGTTCCAGATGGTGCCCCACAGCAACGCACCTACGCCCGTACTTACACCTCATAGCATGGCACCTACTCCCCAGATGGTGATGGAAGGACATCCAGGTTCACATAGCAGTGGCAGTGGAACCGATGTGGACCTGCCCCCAGAGGCTCAGCCAGCAGCTCCTCAAGCAACACTCGTGGAGAATATGGAAATGGAATGTTCAGATCGCAGTCACGAGCACACGATGCACACAATGATGATCACTCCTGAACTACTCGGACTTATCCCATCATCATCTGGACATTCAGATCTGAGTGGGGATGCTGTGAAGGGCAGCCCCAAGAGCTGGACCCAGGAGCACATGGAGATTTCGGaTGTCAACAATGAAACAACACCCAAAACAGGAGGAGGACCCAAGACTTGGACACAAGAGGACATGGAAATGGCTTTGGATGCGCTACGCAATCATAATATGAGTCTGACGAAAGCATCTGCAACGTACGGAATCCCTTCCACCACTCTATGGCAACGAGCGCACAGACTAGGGATTGACACTCCCAAGAAAGAGGGTCCGACAAAGAGTTGGACTGAAGACAACCTTAACAGTGCATTAGAGGCTCTTCGTACTGGAACCATATCAGCTAACAAAGCCAGTAAGGCATATGGAATTCCCAGCAGCACCCTCTACAAAATAGCACGTCGTGAAGGTATCCGTCTGGCAGCACCTTTCAACGCAGCTCCTACTACCTGGAGCCCAGACGATTTGGAGCGCGCTCTCGAGTCCATCCGGTCAGGTGCTTCCTCTGTACAGCGAGCCTCTACCGAGTTCGGCATCCCCACTGGTACCCTCTATGGTCGTTGCAAGAGAGAGGGCATAGAGTTGTCCCGTTCCAACCCCACCCCCTGGTCTGAAGATGCAATGGGAGAAGCTCTAGAGGCAGTGCGTGTGGGCCAGATGAGCATCAACCAGGCAGCCATCCACTACAACCTTCCTTACTCCTCCTTGTATGGTCGTTTCAAGCGTGGCAAATATGAGGCAGAGGGGCACCACCCTGAGGAGCCACCAggtccatcaccaccgccacctcagaTCATGGTGGTGCCCTACCAGCAGCCGCCACCACCCCCTCCTCATGCACAGCACCTCCCACCTCAGCCTCCTCAACACCACTCACCTCAGCAGCACCCCATGTACCAGCACAGCAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHQLLRNEAFVDVTLACNDSSLKAHKVVLSACSSYFQKLLMENPCTHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPDGKDGGPGIGSAEVTPLPILSRRSFTKLRRLSGTKRQRPDAMVRRGIFKDGDHPPHPIHQLQQQQQQQQPQQHPQHMQQQQQQQQQQQQQQMQQQQHQQMQQQALQQQQQQQQQHVQQVQQVQAVQVAQAQQQAAQQAAHQAAQQAAAQQVAAQQAAQQQAQAAAAQQQAQAQQQVAQAQQQQQMVAQQVPQGPNGQPMEMGAVSAAEMAQRSAVGLTERVPECVTVATSTEDDHDMPVVVLESKISPSHLAASYVFQMVPHSNAPTPVLTPHSMAPTPQMVMEGHPGSHSSGSGTDVDLPPEAQPAAPQATLVENMEMECSDRSHEHTMHTMMITPELLGLIPSSSGHSDLSGDAVKGSPKSWTQEHMEISDVNNETTPKTGGGPKTWTQEDMEMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDNLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALESIRSGASSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYEAEGHHPEEPPGPSPPPPQIMVVPYQQPPPPPPHAQHLPPQPPQHHSPQQHPMYQHSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01404243;
- 90% Identity
- iTF_01404243;
- 80% Identity
- iTF_01404243;