Tocc149690.1
Basic Information
- Insect
- Teleogryllus occipitalis
- Gene Symbol
- retn_1
- Assembly
- GCA_011170035.1
- Location
- BLKR01014748.1:452259-479448[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-14 2.5e-09 40.5 0.0 11 80 430 497 426 498 0.90 2 2 0.16 2.6e+04 -1.2 0.4 80 89 1112 1121 1107 1121 0.89
Sequence Information
- Coding Sequence
- ATGACGGTATCCCTTTTGTCCTGTCGGGTCATTCTGCCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCTGTGTCGTCCTGTCACCTGTCGTCCTGTCGTTCCTGTCATCCCCTGTCGTCCTGTCACCCCTGTCGCCCCTGTCGTCCTGTCACCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCTGTCACCCCTGTCGTCCGGTCGCACCTGTCGTCCTGTCACCCCGTCGCCCCCTGTCGTCATGTCGCCCCCTGTCGTCATGTCGCCCCCTGTCGTCCTGTCGTCCCCTGTCGTCCTGTCGTTCATGTCGTTCTGTCGCCCCTGTCGTCCTGTCGCTCATGTCGTCCTGTCGTCCCTGTCGTCCTCTCGCCCCTGTCGTTCTGTCGCCCCTGTCGTCCATTGACGCAGAGTGCCTCCTGCTCCTGCGCGCCTTTCCGCCCGCGCGCTCTTCCGGCCAATGACTCAGCCGCTCCGTTTGGCAGGCGCCGCGCCGTACCGCAccggccaccggccaccggcCACCACCGGCCACACCGCCTTCGCCGTGGCGTCCTGGCCCTCCTCGCCGCGGCGCCGAGCGGCGATCGTGgcccggcggggcggcggtgggtgtGGCGTGGGCAGCCACGCTCTGCCTGGCCGCTTCATTCATCAGCTGCCCCGTCATCTCCAGGCGCGCCGCGCGACGATTACCCCCTCGCTTATCCTCGCTGCCCCCACGTGCCAGCCGGAGACGTGTTGGCGCGGACGCCTCGGGGTGGGCGGGCCGCTCGCGTCTTGAGCAACGTCCCGCGCGATGTTTGCTATTTTGAAATCATAGcgcgcggtggtggcggcggcggtggggacggcggcggcgacggcggcggcgacggcggcggagacgccgtgatggcggtggaggcggcgaaggcgacggtggcggtagcgCCGCCGCAGAAGATTTATGTGTGGAGCCCTGGCTCGCGACCCGCGCGGCAGGTACTTGGAATGCGAACTGTCTGTCCGGGCGTCCACGCCGTGCGTCGCGCGTCTGCTGTGGACGGCGCCTCTGCGCCGCGGGACGGCCGCCTCGCCTGCCTCGCCTCTCGCGCGGGCTTTTCCAACTTTTCTCGCATTGACCGTACCCCCATCAACCGACTGCCCATCATGGCCAAGTCAGTGCTCGACCTTTACGAACTGTACAACCTGGTGATCGCCCGCGGGGGCCTGGTGGATGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCACCTGCCGTCCTCCATCACCTCCGCCGCGTTCACGCTGCGAACGCAcgccgcgcagcgccgcctggTCTGCGCACCGCGCTGCGCTAACGAGCCGGGTgggctgcgcgggcgggggcggggcggggggcggggccgggggggccGGGGACGCCGCGTGCGGGCGGGGTGCCAAGGAGTCCGGCACAACCACATCCCCAAGCGGCTGCGACGCATGACAGACTCTCTCTCGCCTCCGATCACgatgctggcggcggtggcggcggcggcggcggcggcggtagacgTCCCCTGCGCCGCGGCGTCTATTCCGAGCTCGTCGCCCCGCCCGACGGATCTGCCATCCATCACGGCGTGTCACGGCCCTTATTTCGGGCTGATTAATTCTTCGCGGgcaggtggcgcggcgcgggcggcgcggcgcggggcgagatGGCGTTGGCGCGGAGGCTGGGCCGGCGCCAACGGCAACACGCGGGCGGTCGTTGGCCGGTGCGCGCCAACTGGGCCGCCCTCGGGggtggcgacgcgacgcgacgcggcgggggcgggggcggggctggggcgggcacGGAAGAGGGCGTGGGGTCGCAGAGAGAAGGCCCCATCGCGATGGTGGCCCTTCGCCCTTCCGTTCGCTAGGACGCTCGACTACGGCGTTGTTCAGTCGCTGCGGACTGCGGTGATGCGAAAGAGTCTGCCGCGGCTCCGCGTCGGTCTAATGACTCACGGGGGCGGCCGACGGGCGAGCGAGCGACCCGATAACTCGCCGCGCAAACAGAATACAGGGATCCGCGACCGACCGCGGCCGCCACAGCGAATGCATTGTCAGCGGCTGAGAACGACTCCGCGGCCGCGGCTCCCACGCGCGCACAGCCCCGCTTCTGTCcacccgccgcccctcccctcccctcccgtcccctccgctccccgcgtCATCACCAGCCCCACGCTGCCACGGCTTCCGCAATTACCGCCTCCACACGAtcttcgccacgccacgccacgccacgccacgccacaccacactgTCACCTCCCGCTCCATAAGCCAGGGCGTTTTCATCATCCTCTCCACTGTACAAACGCCGGCTGCCGCCGCGTCACGCGCGCAAACAGAGGACGATCGCCCCGCGTCCCGCTCCCGCGCCGCACGGGAGGagtcgcgcgccgccgctccccgcctctccccgccgctccccgccgctcctcgccgcttcCCGCCGCTTCCCGCCGCTCCCCGTCACTCCTGCGTTGTttcctccttcctctttcttcgcTCCCCCGTCGCTTCCCCGTCGCTTCCCCGTCGCTTCCCCGTCGCTTCCCCGTCGCTTCCCCGTCGCTTCCCCGCCGCTTCCCCGTCGCTtccccgccgcttccccgccgcttccccgccgcttccccgccgctccccgctacTCCCCGCCGCTCCACCGTGCTTTCCTCGTTGCTCTTCCGTCGCTCCCCCGTCGCTCCCTACCACTCACTGTTGCTTCCTCACCGCTTCCTACCACTCCCTACCGTTTCCACCTGCTCTCTTTTGCTCCCTTCCGCTTCCCCATTGTTTCCCCGCCTCTCCGTCGCTCCCCCATCGCTTCCCCGCCGCTCCTTGCTACTCACTGTCGCTCCCTGTCGCTTCTTCGCCGCTTCCCAACGCTCCCTGCCGTTCCCGCCCACTCCCTGCCGCTCCCTTCCGTTTCCCCGTGTCTCCCCGCGGCTCCTCTATTCCCCGTCGCTTCCCCACTGCTCCCCCGTCGCTTCCGAGCTGCTTCCCCGAGTTTCCCGTCACTTCCCCACCTCTCTGCCGGTCACCGCTGCTCAGTGTTCTCCCATCCCCGCCGTTCCCCtTCGCAATCGATCTGTTGCTGATGGTGCTGCGCTCTGTCCGTAGATACATGAAGTACCTGTATCCGTACGAGTGTGAGAAGCGGCGCTTGAGCACGCCGGCAGAGCTTCAGGCGGCAATCGACGGCAACAGGCGCGAGGGACGACGTAGCAGTTACGGCACCTACAGCGAGATGGTGCAACGTTCGCCCGTAGTAAGCCTGTCCAACAGCCAACAGATGTCGCCGCTGAGCTTGGTGACGAGTCGACCTGCTGTCAACGGCAACTCCAATCACCATGGACATCACCCCTATGGACGTGATGTGCAGCACCACCCACCGCCGCACCACCCGGCGcacccacccgcccacgcacCACTTGGCCCTGGCGAAAGCCGATGGCCCGCCTCGCTCCCATTGCTGACGTGGCGGCCTTCCTGCGCAGGATGGCCGCGTATCACAGGCGCCATGCCGAGCCTGGCGCCGCCGGACCTGGAGGCGCGCATGGTGGAGTACGTGAAGCTGCTGAACAAGGAGCTGCGCGCGTCGCCCAGCACGCCCCCGCACATGGtgctgggcgcgggcggcggcaacggcggcgggcCCGGCTCGCGCCAGGGCtcgtcctcgcccccgtcctcgtcctcgccgcaGGAGGCGGCCGCCCTCAACGCGCTCACGCTGTGGAACCTgtacggcgcggcgcccgcggcggcggcggcagcggcggcggtggcggcgggcggcggcggcggcggagccggcgcgggcgggccgggcggcgcgggcgggcccttggggctggcgccggcgcccgccgtcctcccgcccgtGCTGGAGCCGCAGAAGGAGGCGCTCAACCTGGACGTGCGCGAGCGAGAGCGCGACCGGGACCGGGACCGCGAccgcgagagggagcgagagcgcGACAGGGAGCGCGTGGACGTGAAGCGAGAGGCCGAGGAGCCGctgctcgccacccccgccaaaCGCCCCCTGCACGACGAGGACGGCGTCAAGCCGGCCAACACGCACATCAAGATCGCCAGCCGCGGTGAGTGCTCGCACGCCCTCCCAGCCACTTACTCGGTCCACACATCCTCTTACCCTCTCGTTCCACACACCAAATGGGACTCCAAGTCCAGAAATTACCTCTCCAACGGCTCTTGGTGGGGCTTGACTCGTGCGCGGCGTGAGGTTTTCGGGTTCCCGCGTTCTCAAACAATGGGGTGCGCGACGTGTGAGGCACTCGCGGGGCCACCTGGGGCGAGGACGCGCGTCGTCGCTTCGCGGCCGGAGAGCGACGAAGGAGCCGCGGGGAGGCCTCGCGTGCGAGGCTCCGCCGCGAACGGCTCCTGCTTCTCATCCTTCAGGTGCCGCGCGCCGGCGAGCGAGGCGCGCGACGGGCGCGGAGGCATCGACAACTCGCTGGTGGTGAGCATGGAGCTGAACGGCGTCATGTACCAGGGGCGcggcgcgctcgccccgcccccgccgccgcccccgcgcgcagggctcgccgccgcccgcggcctctcgcggccgccgccgccgccgccgccaccgccactgtcatcTCCACAGTcctcgacgcccgccgccgcctccgccgccgctgctctgccgcagccgccgcccccgccgccgccgtcgacgtcgtTGCCGCTGCTACCACCACCGCTGTTGCTGCCACCTGGGCTGCCCGCTCCcttcccgcccccctccccggccGAGCCACGACCTTGCTCCCCGTGCCACTCCTTCGCCTAG
- Protein Sequence
- MTVSLLSCRVILPLSSCHPCRPVTPVVLSPLSSCHPCRPVTPVVLSPLSSCHPCRPVTPVVLSPLSSCHPCRPVTCVVLSPVVLSFLSSPVVLSPLSPLSSCHRPVTPVVLSPLSSCHPCRPVTPVVRSHLSSCHPVAPCRHVAPCRHVAPCRPVVPCRPVVHVVLSPLSSCRSCRPVVPVVLSPLSFCRPCRPLTQSASCSCAPFRPRALPANDSAAPFGRRRAVPHRPPATGHHRPHRLRRGVLALLAAAPSGDRGPAGRRWVWRGQPRSAWPLHSSAAPSSPGAPRDDYPLAYPRCPHVPAGDVLARTPRGGRAARVLSNVPRDVCYFEIIARGGGGGGGDGGGDGGGDGGGDAVMAVEAAKATVAVAPPQKIYVWSPGSRPARQVLGMRTVCPGVHAVRRASAVDGASAPRDGRLACLASRAGFSNFSRIDRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHAAQRRLVCAPRCANEPGGLRGRGRGGGRGRGGRGRRVRAGCQGVRHNHIPKRLRRMTDSLSPPITMLAAVAAAAAAAVDVPCAAASIPSSSPRPTDLPSITACHGPYFGLINSSRAGGAARAARRGARWRWRGGWAGANGNTRAVVGRCAPTGPPSGVATRRDAAGAGAGLGRARKRAWGRREKAPSRWWPFALPFARTLDYGVVQSLRTAVMRKSLPRLRVGLMTHGGGRRASERPDNSPRKQNTGIRDRPRPPQRMHCQRLRTTPRPRLPRAHSPASVHPPPLPSPPVPSAPRVITSPTLPRLPQLPPPHDLRHATPRHATPHHTVTSRSISQGVFIILSTVQTPAAAASRAQTEDDRPASRSRAAREESRAAAPRLSPPLPAAPRRFPPLPAAPRHSCVVSSFLFLRSPVASPSLPRRFPVASPSLPRRFPAASPSLPRRFPAASPPLPRRSPLLPAAPPCFPRCSSVAPPSLPTTHCCFLTASYHSLPFPPALFCSLPLPHCFPASPSLPHRFPAAPCYSLSLPVASSPLPNAPCRSRPLPAAPFRFPVSPRGSSIPRRFPTAPPSLPSCFPEFPVTSPPLCRSPLLSVLPSPPFPFAIDLLLMVLRSVRRYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYSEMVQRSPVVSLSNSQQMSPLSLVTSRPAVNGNSNHHGHHPYGRDVQHHPPPHHPAHPPAHAPLGPGESRWPASLPLLTWRPSCAGWPRITGAMPSLAPPDLEARMVEYVKLLNKELRASPSTPPHMVLGAGGGNGGGPGSRQGSSSPPSSSSPQEAAALNALTLWNLYGAAPAAAAAAAAVAAGGGGGGAGAGGPGGAGGPLGLAPAPAVLPPVLEPQKEALNLDVRERERDRDRDRDRERERERDRERVDVKREAEEPLLATPAKRPLHDEDGVKPANTHIKIASRGECSHALPATYSVHTSSYPLVPHTKWDSKSRNYLSNGSWWGLTRARREVFGFPRSQTMGCATCEALAGPPGARTRVVASRPESDEGAAGRPRVRGSAANGSCFSSFRCRAPASEARDGRGGIDNSLVVSMELNGVMYQGRGALAPPPPPPPRAGLAAARGLSRPPPPPPPPPLSSPQSSTPAAASAAAALPQPPPPPPPSTSLPLLPPPLLLPPGLPAPFPPPSPAEPRPCSPCHSFA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -