Tluc025374.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419609.1:2564494-2580777[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.3 1.6e+02 3.6 0.0 5 18 510 523 509 523 0.90 2 11 0.38 28 6.0 1.4 1 23 684 706 684 706 0.95 3 11 2.2 1.6e+02 3.6 3.8 1 23 710 733 710 733 0.92 4 11 0.63 45 5.3 3.7 1 23 740 762 740 762 0.97 5 11 3.4e-05 0.0024 18.7 0.4 2 23 767 789 767 789 0.95 6 11 0.0018 0.13 13.3 0.9 1 19 796 816 796 821 0.90 7 11 3.7 2.6e+02 2.9 8.0 3 23 828 848 827 848 0.96 8 11 0.034 2.4 9.3 0.1 1 23 859 882 859 882 0.92 9 11 0.00052 0.037 15.0 1.9 1 23 888 911 888 911 0.94 10 11 9.2e-05 0.0066 17.4 1.5 3 23 922 942 921 942 0.98 11 11 0.004 0.28 12.2 0.1 2 23 949 971 948 971 0.94
Sequence Information
- Coding Sequence
- ATGCCCGTACCTGCCAGCGGGGGCGCGGCCAAAATCAAAACTAATAATCAGAGACGGAGCTTCCGTACGAGTATCAACGCGCTAAACAGGGGTCGAAGCTCCCTCTCCCCGCCCCTAGACGCGTTGGTAGCAAATCTGCCTGGGCCGAGTAGTTTGAATGAGGATCTAGAATCGATGGAGCGATCGTCGTTGCTAGACCCACTAAATATTGAACTAGATATTAAATCGGAAACAAAAACTGATGACGAGGAAGACAGTGAGCTGATTGAAAATGATGAAATTCAAGTACAATGCGAACTGAATATTGGTTTCGAAGAAACCTTTGAAATATCAGAAGACGTACCGAAACGAAAGCTTGACAATGAAGCCAACGCCAATATAGATGATGAATATAGCCCAGCAGCGAAAAAACTTTGTATCAAGCGACCAAAAGAATGGATGGTAGGGAAAAAATACAACAACTTATCACAAGCAGAAGCATTTGTTAGAGAAACGCGAACTTGGGAACTAGTACCTTACATGTGTACCGACTCCGAAAAATATTACAAATGTATCAAAAATTGCAATGCATTAATCAAACTAAAAGAGTCAGCTTCGGGTATAACGATAATGTATTCGAATAAAAATAAGCACACTTGCAGGCCGATTAGACTACACGTGGAGGACAAACCTCGAGATAAACTGAAAATGACAGTAAAAATGAAAGAGGAAATTGACAAGCTTCGTGGAATGAAAATGAAACCGAAAGAAATATATAAATGTCTCAAAGAAAAGTTCAATCCTCCGCCGACTAATAAACAAATGTATTCATATATGCACAACAAATACAAAGGGAAGCCATACAATACATTAGGCGCTTCGTTCTCGTTCACAGAACTCAACCACTGGATGGAACAAAATAAAGAAGTCCCTTCAGGCGAGGATAGCGGATTTGTGATAGATTCCGATGTAGACGTAGAGCGTAATAGCCTCAGGTTTATGATTTCTACTAAAAGGCTCCTAAAAAATGCTTTTGAATGTAAAAATGTGGCTCTGCATTTCAGCTTGACACACATACTTCACTGGTATGACAAGCCTGTGATATTAATTGGCTATCCTGATCGCGACGAGATATTTCACCTATTAGCTATAGCAGTGTGCGACAATGTGAAACAAGAAGATTTTGAATTCATTTTCAATAGTTTAAAAACTAAATTTAAAGAGATATTCCACAAGAATATAAATCTCAAAGCTTTGGTCGCAGAATCTTCGGCTGCTATGAAAGAAGGGTTTAAAAAAGTGTTCCCGAATGTTCCAATACGTTATTGCTATGACCATATGAGGGCTACCGTTAGGGCGGATCAATTTCACTTTTCCCGCATCGACGAATTGCTAATTGATCTGGATTTTGTCCAAGCTGCCGAAAACTATACGGAGTTCAAGAAATGCATGGATTTATTCGTATGCAAGTGGTCAAATATACACATATATTTCCATGATTACTTTACGACGAAATGGGTAATAAAGTACCCTAATTGGTACGAAAGCTTTTGTCCAGAAACATTCAGTACGAACGCGTCTTTGGAGAGGGCGTATCATAATTTGAAAGTAGAAAGCAGCATTCCAGAAAAACTCCACCCGAAAAGGTTTTGCTCCTTGATCAAAACTATAGTTGAAACTAAATCCTTGAAGTACAAAAGCGGACGTTTGAAGATTGCTAATTCTGTCACCATTACACGGAAAATGATATCGGAGGGTTATGTTTGGTCTTTGATGGAAAAGAACTTTATTTTCAAGGAAAGTGATGGATGGATAGAATACTTAACGCCAACAGGAGATCGTTTAAATGTGGACTGGAGTGTGCTTGAACCAGAACCTACGTCTTTCGATGAATATTTCCAAAAACGATCATCCTATCAAAAGGTTTATTTCCTGGACAATTCACCGGAATGGCAAAAGGGTAAATGCACGTGTGCCGTGTTCCTAAAAACGTTTATGTGCAAACATTTGTTGGGAATGGCAATCAAACTGGGATATTTGACCCCGCCGCGTAAAGTGAAAAACGGCAAATTCCTATGCAAACTATGCAAGTCAGTTCTCACTACGGAACCCTCTTATAAAGAGCACAAAAGAAGACATCTGAGAAGGTACGAATGCTGCGATTGCTACAAGCGCTACAACACGATGCACGCCGCGGTGGAACATTACAAGGAGCAACACGGCGCCATCGCCACCGCGTTCACTTGTCAACAGTGCGGCTTTACAACCGACTCAAACCGCAGATATCGCTACCACCGCGACAAGCACAAAGCCAAGCCGCAGTGCGCGCAGTGTGGGAAGACCTTTGTCAACAACTCGGGACTTAAAGTGCACAATCTAACCCAACACAAGGGCTCCATAAAGAAGTACGCGTGTTCGTACGAGTCTTGCGACAAAGTGTTCTCTACCAAGTCGGGCCTGCGCGCGCATTGCCTCGGAGTGCACAAGTCCACCGGAGCGTATTGTTACACTTGCAGGACCTACTTCAGATGCAAATCCACGCTGCGACACCATCTGATGACGCATTCGGCTCACGTCAGCAAGGACGATTGGAAATTCGCGTGCGAAGAATGCGGTGAAAAGTTCCTGTTGAAAGCGTCGCTAAAGGAACACATAGACTGGCTGCATTTAGGCAAAACCACGCACCGCTGTGATCTCTGCTCTAAGGTTTACAAAAACGCGCGAAGTCTGTTGAGGCACAGGGAGTATGTCCACGACAAGAAAAGACCGCCCAAGAACAAGATATGCGACCACTGCGGGAAGGGATTCACGACGCTGACGATCCTGCGCACGCACATCCGCACGCACACCGGCGAGAGGCCATTGACCTGCCCCCGCTGCCCCGCCACCTTCGCACACCCCGGCGCGCTCTACACACACAACAGACTCATACACGCCAAGGACACGTAG
- Protein Sequence
- MPVPASGGAAKIKTNNQRRSFRTSINALNRGRSSLSPPLDALVANLPGPSSLNEDLESMERSSLLDPLNIELDIKSETKTDDEEDSELIENDEIQVQCELNIGFEETFEISEDVPKRKLDNEANANIDDEYSPAAKKLCIKRPKEWMVGKKYNNLSQAEAFVRETRTWELVPYMCTDSEKYYKCIKNCNALIKLKESASGITIMYSNKNKHTCRPIRLHVEDKPRDKLKMTVKMKEEIDKLRGMKMKPKEIYKCLKEKFNPPPTNKQMYSYMHNKYKGKPYNTLGASFSFTELNHWMEQNKEVPSGEDSGFVIDSDVDVERNSLRFMISTKRLLKNAFECKNVALHFSLTHILHWYDKPVILIGYPDRDEIFHLLAIAVCDNVKQEDFEFIFNSLKTKFKEIFHKNINLKALVAESSAAMKEGFKKVFPNVPIRYCYDHMRATVRADQFHFSRIDELLIDLDFVQAAENYTEFKKCMDLFVCKWSNIHIYFHDYFTTKWVIKYPNWYESFCPETFSTNASLERAYHNLKVESSIPEKLHPKRFCSLIKTIVETKSLKYKSGRLKIANSVTITRKMISEGYVWSLMEKNFIFKESDGWIEYLTPTGDRLNVDWSVLEPEPTSFDEYFQKRSSYQKVYFLDNSPEWQKGKCTCAVFLKTFMCKHLLGMAIKLGYLTPPRKVKNGKFLCKLCKSVLTTEPSYKEHKRRHLRRYECCDCYKRYNTMHAAVEHYKEQHGAIATAFTCQQCGFTTDSNRRYRYHRDKHKAKPQCAQCGKTFVNNSGLKVHNLTQHKGSIKKYACSYESCDKVFSTKSGLRAHCLGVHKSTGAYCYTCRTYFRCKSTLRHHLMTHSAHVSKDDWKFACEECGEKFLLKASLKEHIDWLHLGKTTHRCDLCSKVYKNARSLLRHREYVHDKKRPPKNKICDHCGKGFTTLTILRTHIRTHTGERPLTCPRCPATFAHPGALYTHNRLIHAKDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -