Tluc025383.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419609.1:2701938-2720385[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.1 7.4 7.8 0.6 1 23 363 385 363 385 0.97 2 11 0.0039 0.28 12.2 1.6 2 23 393 414 393 414 0.96 3 11 6 4.3e+02 2.2 0.7 1 23 418 441 418 441 0.91 4 11 0.017 1.2 10.3 1.1 1 23 448 470 448 470 0.97 5 11 4.8e-05 0.0034 18.3 1.4 2 23 475 497 474 497 0.96 6 11 0.38 27 6.0 0.4 2 23 527 547 526 547 0.94 7 11 0.00039 0.028 15.4 1.5 1 21 556 576 556 581 0.93 8 11 0.00077 0.055 14.5 0.1 1 23 586 609 586 609 0.98 9 11 0.1 7.3 7.8 1.3 2 23 616 638 615 638 0.94 10 11 0.0081 0.58 11.3 1.8 1 23 647 669 647 669 0.97 11 11 0.012 0.88 10.7 0.1 1 23 675 698 675 698 0.96
Sequence Information
- Coding Sequence
- ATGCAAGCAGAAAATCTGTGCTGGGAGTGCCACAAGAAACTCAAGAATGTTTGGAAGTTCCATAAACAAGTCGAAGATGCTTGTAAGAAGTTGATTCATGTGGCAAAACGAATAGTCATTAATGGTGAAAAAACATGTAATCTAAATTCGCTATCAAGTTTAAAAACTCAAGTTCTTAAAGCACAAGTAGACATTGCTCCATTTGTAGATACATTTGTAAAAATAGAAAATAAAATTCATGAACCACTACTATCAGGTACAGATGATCCTACATGTATAAAAATGGACAGTCTTAAAAAGATTGATACTTTAAATTTAAAGTATGAAAATCTAAAAACTGGACATGTCATACAACAATTGAATAATAAGCAAGCTCTAATTGTTAATCCTCCTACAAAATTCTGTAGCGCAACTGTAACTCAAGCTAAATCTGGCATTCCGCTATTGTTACTAAAGAAAATTGAAGAGAAAAAGGTAAAAGAATCAAATTTTCCAGATATTAATATGCAAATGAGGGGACTACAGGTACCTGTGAAGGTTATTGCTTCTCCTTTGCAATCTGTAAAGAACATTGGCCAGCAAAGTGATAAAAATTCAATTCATAAACCACCTGATGTAGTAAAACCGTGTCAAGATAAAATAGATATAAGAGAAAATAAAAATGCACATGACTATGAAGAGATATTGTCCATAACAAATATAAACGAACTGGAATCATCTGATACAAATATAAGTTTCGAAGATAATAATGAAAATTTGACACCAATGGAAAATAATTTTACGGATGTTGATATCCCCATAATGGATTTCACTAATTACGGGCATATTATGGATAGGTTCGCTAAAACAGTTAATATACCTATAGAAGATAATACTAAAGATGAAATCAAAATAAATACAAAAAGAAAACTCAATGTACTAGATACTACAGAAAAAAAACACATTAAAATTGACAGATCAGCAACATATTATTATAAAGATACATTTAGAATTTTCAATGAAACAACAGCTAGAAATATAACAGAAGAACAATTGGCTAAACTGAGACAGGATGATGGTAATGACCCGTCGTATTTGAATGCTAACTTCAAGTGTGATCGCTGTATATTTGGGTTCAAAGCGGAGAGTCAGTTCAACGCTCACATGGAACAGCATGATGAGTGTTACGGAGAAGAAGTGTGCAGTGTGTGCGAGCTGCGGTTCAAACATAAAGAGGCACTCGACAAGCATAAAGAGTCACATTTTATCGCGTTTTTCTGCTGGAAGTGTGACTTCGGCAGCCGTTTCCTGCAGTCGGTGGCGGCTCATTACAACCAGCAGCACAGGCCGGCAGTGACAGGCCACTACTGCGACACATGCGAAGCCGTCTTCGACTCCAAGAAACGTTTGTTGTCCCATGCGAAGATACATTCGAATTGGCTGACATGTCAGACTTGTAACATATCATTCAAAAATCTCAAAACACTGCGAACACACATCAGAAATATCCACAAAAAGAACAAGGCAATAAAATGTTCTTCTTTACGAGTCGATGACAAATCGAACTATATGTTTGCCGCCCAGAATCCGGATAAAATAAAATGTTGGATTTGTAAAAAAATGATTTCCTCTCGAGCAATGCAGATTCACCAGAAACTACACAACCAACAAGTTGACGATACGACGTATTATTGTAAGGAGTGCGACAAGTTCTTTAGCAGCCAGATCCGCTACAAGCAGCATTTGCAAGTAGTCAAGATACATTCCACAACGAGGTTCGAGTGTGATTATTGTGGAAACCAGTATACAGCTAAGCAATCCCTGGCTGACCACATAATGACAGGGCACTTGGGTAAAGAGCCGGTGAGATGCGAACAATGCGGAATGTCTTACGCCTGCAATCGCGGCCTTCGCAAACACGTTGCGAAAAAACACTCCCGCGCAGCGCCGCCCCCTAAGTTTATATGCAGCCAGTGCGGGAAGGCATTCACTTGTATGCTCAATTTGTCGTTACACCAGTTGACGCACACCGGCGTGCGGCCGTACCCCTGTCCGTACTGCGACTACAAGGCGGCGCTGAAGGGCACGCTCATCTCGCACGCGAAGGTCAAACACAAGGACCGACCGCCGCTCAAGTATCGGGACATCGCGCCGCACAATCACACTTAA
- Protein Sequence
- MQAENLCWECHKKLKNVWKFHKQVEDACKKLIHVAKRIVINGEKTCNLNSLSSLKTQVLKAQVDIAPFVDTFVKIENKIHEPLLSGTDDPTCIKMDSLKKIDTLNLKYENLKTGHVIQQLNNKQALIVNPPTKFCSATVTQAKSGIPLLLLKKIEEKKVKESNFPDINMQMRGLQVPVKVIASPLQSVKNIGQQSDKNSIHKPPDVVKPCQDKIDIRENKNAHDYEEILSITNINELESSDTNISFEDNNENLTPMENNFTDVDIPIMDFTNYGHIMDRFAKTVNIPIEDNTKDEIKINTKRKLNVLDTTEKKHIKIDRSATYYYKDTFRIFNETTARNITEEQLAKLRQDDGNDPSYLNANFKCDRCIFGFKAESQFNAHMEQHDECYGEEVCSVCELRFKHKEALDKHKESHFIAFFCWKCDFGSRFLQSVAAHYNQQHRPAVTGHYCDTCEAVFDSKKRLLSHAKIHSNWLTCQTCNISFKNLKTLRTHIRNIHKKNKAIKCSSLRVDDKSNYMFAAQNPDKIKCWICKKMISSRAMQIHQKLHNQQVDDTTYYCKECDKFFSSQIRYKQHLQVVKIHSTTRFECDYCGNQYTAKQSLADHIMTGHLGKEPVRCEQCGMSYACNRGLRKHVAKKHSRAAPPPKFICSQCGKAFTCMLNLSLHQLTHTGVRPYPCPYCDYKAALKGTLISHAKVKHKDRPPLKYRDIAPHNHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -