Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419603.1:2708311-2722951[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00023 0.017 16.1 2.1 1 23 289 312 289 312 0.96

2 8 0.047 3.4 8.8 3.3 2 23 320 341 319 341 0.94

3 8 0.00019 0.014 16.4 9.5 2 23 373 394 372 394 0.98

4 8 1.1e-05 0.00077 20.3 0.2 1 23 398 421 398 421 0.96

5 8 0.041 3 9.0 1.2 3 20 440 457 438 459 0.94

6 8 0.11 7.6 7.8 5.0 2 23 533 555 532 555 0.91

7 8 0.00066 0.047 14.7 1.4 1 23 592 614 592 614 0.97

8 8 3.5e-05 0.0025 18.7 2.7 1 23 620 643 620 643 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00023	0.017	16.1	2.1	1	23	289	312	289	312	0.96
2	8	0.047	3.4	8.8	3.3	2	23	320	341	319	341	0.94
3	8	0.00019	0.014	16.4	9.5	2	23	373	394	372	394	0.98
4	8	1.1e-05	0.00077	20.3	0.2	1	23	398	421	398	421	0.96
5	8	0.041	3	9.0	1.2	3	20	440	457	438	459	0.94
6	8	0.11	7.6	7.8	5.0	2	23	533	555	532	555	0.91
7	8	0.00066	0.047	14.7	1.4	1	23	592	614	592	614	0.97
8	8	3.5e-05	0.0025	18.7	2.7	1	23	620	643	620	643	0.97

Sequence Information

Coding Sequence: ATGTCCGATCTAAAAGTTTGTAGAATTTGCTTGCGAACGCAGTGTAAAGTGTACAAATATGACCGCTATCAACTCAAGGCATATTATGAAGAAGTTATGGCTCAAAAAATGGATAACTCAGATGGCTTGCCTCAGTACTTTTGCTACGAGTGTGCTACAATTTTACACAAATTCCACAAATTCAAAGAGAAGTGTTGGACAGGTCTAAGAGTGCTGAAACAATTGCAGACCAGCCATAAAGGCAATATAACTTATGAATCAATCCACAATCTAGACACAGCTGCATTACTCTTGAAATCACAGTTAGAAATCCTCTCTGTCATGAAACGAGTCAAAACCTATGTAACCAAAGACTGTAAAGAAACCTCAGACTCTGAATGTGAAGCTAAAGACACCAATGATGAAAAACCAGTTTATGTTAAAGATATAGATGAAGAAGTATTTTTAGATCAAGACGATATCAACTATGATAACACTTATGATTCTGATATTCCTATAGAAGACCTGAAAAAAGAACCATTAAATGAAAAACCTGTTGATGAAGAAACAAACATTGTATCTGAAACAAAAGTCGAAGATTCAGATTATAATAATAAGAATTTAATAAGTAATATAAATTTAAAAAGTCCAAAAACTATTTTCATTGATGTTAGAAGCGATATTGTAGAAGTGAAAAGCGAACACATTAAGGAAAGAAGAAAGAGTTTTTCTGAATATGGTTTGAAGAAAATTAATCCAAAGTTTGCAAAGGCCAAACTAAATTTTCCTGATAAAGAAAGTTGGGAGATTTATACTTTAAATGAGGAAGAGGCTGTGAAAGAGTTTCAAATGAGAGCGGAGCGACAACCCTATTTAGAAGCTGCATTTAAATGTGTTGATTGCTTCAAAGGCTTCTCCAAAGAAGATATGTTGCAAAGGCATAAAAAGCTAAGACATAGTGAGAGTCTAGGCCAGTTGGAATGCAGGTTTTGTCACAAGAGGTTCAAATGGGACAGCAAGTTGCGGAGACATATGGTGGAACATTTCACCAGGTACAAGTGTCTGCTGTGCGATATCGTCGTTTGCGTCGAAACAACAGCTCTGCTGCACGAGGAGTGGCATAAAGGTGAGCCGAAGCGCTGCCACCACTGCGGGGAGACGTTCCGCCACCGCTCCACATACTACACGCACCTGCGCACGCACAGGAGCGAGCACGTGTGTGCGTTGTGTGGCATGTCGTTCGTGAGTCCGTCCGGACTTAACATGCACATGAAGATCAAACACGTCGATCAGAGCAACATCGAAGAAGACGACGATGACGCACCAGTGAACACATTTTGCGATAAATGCAACATGCGCTTTGAAACAAGGAAGGCGTTTGAAGAACACATCTTCCATTCTGCGATGCACACCGACGGGACGGAGGATGAAAAGAACAAAGCAGGTGTCAAAAAGAAAATTCTAGGGAAACAGTTGAAGGGAGTGATTCTAGCCAAAATGACGCCCGAAAAAAATCGTCCAGATTTGAATGGGAAGAACAGCACTGATGAAGAAATGCCTCTAAAACCAGGGAAGGGACGCCGGGCCAGGCGGAGACGATGCCATAAGAAACCTAGCACTTGTAACCAGTGTGGCAAGCACTTCGAGACGCAAGCGGCCTGTATGAAGCACCACCAAGCAGAGCACCCTCGCACCTCCTTCTACAGCGAGCGACACATCTGCGAGATATGCGGCGCTTCCCTCGCTCCCGGCAGCGTACCAATGCACCAAAACATGCACAGCCGCCAGAAAGAGTTCCCCTGCGGTAATTGTTCTCGCAAGTTCCACACTCTCGCGGGACTCAAGCGACATCTTGTCACGCACACCGGGGAGAAGCCTTTCGCGTGCTCGCTGTGTGACAAACGGTTCACACAGAGCAACAGTATGAAACTGCATTATAGGACCTTCCATCTCCAACAACCTTATCCTAAGAGAAACAGGCGCAAAAGAAAGGACGCCCCACCCTCCCTACCCCCCTCAGACAAGTCTACGAGCGAAGACTCCGCGAACGATGCAGAGCCGCGCCCTCCGCCCCCAGACCACAATACGGAGAGCTTGCACTACCTCACACTTAGCTGA
Protein Sequence: MSDLKVCRICLRTQCKVYKYDRYQLKAYYEEVMAQKMDNSDGLPQYFCYECATILHKFHKFKEKCWTGLRVLKQLQTSHKGNITYESIHNLDTAALLLKSQLEILSVMKRVKTYVTKDCKETSDSECEAKDTNDEKPVYVKDIDEEVFLDQDDINYDNTYDSDIPIEDLKKEPLNEKPVDEETNIVSETKVEDSDYNNKNLISNINLKSPKTIFIDVRSDIVEVKSEHIKERRKSFSEYGLKKINPKFAKAKLNFPDKESWEIYTLNEEEAVKEFQMRAERQPYLEAAFKCVDCFKGFSKEDMLQRHKKLRHSESLGQLECRFCHKRFKWDSKLRRHMVEHFTRYKCLLCDIVVCVETTALLHEEWHKGEPKRCHHCGETFRHRSTYYTHLRTHRSEHVCALCGMSFVSPSGLNMHMKIKHVDQSNIEEDDDDAPVNTFCDKCNMRFETRKAFEEHIFHSAMHTDGTEDEKNKAGVKKKILGKQLKGVILAKMTPEKNRPDLNGKNSTDEEMPLKPGKGRRARRRRCHKKPSTCNQCGKHFETQAACMKHHQAEHPRTSFYSERHICEICGASLAPGSVPMHQNMHSRQKEFPCGNCSRKFHTLAGLKRHLVTHTGEKPFACSLCDKRFTQSNSMKLHYRTFHLQQPYPKRNRRKRKDAPPSLPPSDKSTSEDSANDAEPRPPPPDHNTESLHYLTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -