Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419608.1:484984-486810[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.032 2.3 9.4 0.3 2 23 257 279 256 279 0.92

2 10 0.4 29 5.9 0.6 1 23 285 307 285 307 0.97

3 10 0.0018 0.13 13.3 6.7 2 23 314 335 313 335 0.93

4 10 0.019 1.4 10.1 0.5 1 21 339 359 339 360 0.92

5 10 7.3e-05 0.0052 17.7 0.2 2 23 383 404 382 404 0.96

6 10 0.033 2.4 9.3 2.5 1 23 411 433 411 433 0.94

7 10 0.00025 0.018 16.0 1.1 1 23 439 461 439 461 0.95

8 10 8.9e-05 0.0064 17.4 2.7 1 23 467 489 467 489 0.96

9 10 0.00022 0.016 16.2 1.3 1 23 495 517 495 517 0.98

10 10 2.7e-06 0.00019 22.2 1.8 1 23 523 546 523 546 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.032	2.3	9.4	0.3	2	23	257	279	256	279	0.92
2	10	0.4	29	5.9	0.6	1	23	285	307	285	307	0.97
3	10	0.0018	0.13	13.3	6.7	2	23	314	335	313	335	0.93
4	10	0.019	1.4	10.1	0.5	1	21	339	359	339	360	0.92
5	10	7.3e-05	0.0052	17.7	0.2	2	23	383	404	382	404	0.96
6	10	0.033	2.4	9.3	2.5	1	23	411	433	411	433	0.94
7	10	0.00025	0.018	16.0	1.1	1	23	439	461	439	461	0.95
8	10	8.9e-05	0.0064	17.4	2.7	1	23	467	489	467	489	0.96
9	10	0.00022	0.016	16.2	1.3	1	23	495	517	495	517	0.98
10	10	2.7e-06	0.00019	22.2	1.8	1	23	523	546	523	546	0.98

Sequence Information

Coding Sequence: ATGGAACCTGAAAATAGTTACTGTCGTTTATGCGCGCAGTTGAAGCACAGCACCGACATGTTAAACCTACAATTGGAAGAAAACAAACGAAAGGAAATATCAAAGAAATTGGATCTAGTGAACGCTAACACAAATCTTCACGAAGATTGTCTTCCCAAAACTGTTTGTTTTGAATGTGTAAACTGTTTAGATCGAGCTTTCGACTTCGTGACGAGCATAAATCATGCCCAAGATGTGCTAAACGAAATATTCGTGAAAAATAAAAAAAAAGAATCTGTTGAGGGTACTGATGATGTAGAGTATATTGATTTATATATCATTCCTGAAGACCAGAAAGACTCGTTGAGCACAATGCAAGTTGACAACCTAGATGATGATGTCAAATTAAATGAAAAGGAAGAATTTGTTGAAGAGCTGGAAGACCAGAAAGATTCGTTTAACACAATAATGCAAGTTGACAACCTAGATGATAACATCAAATTAAATAAAAATGGAAAACGCAAATACTTTAACCCAAGAAAAAAGAAAGAATTGGTTGAAGAGCTGGAAGACCAGAAAGACTCGTTTAGCGCAATGCAAGTTGACAACCTAGATGATGATGTCGAATTACATAAAAAGGAAGAATCGGTTGAAGAGCTGGATGACCCAGAACCTGAAATTAAAAGCAGCAAAGACATACAGAGTAGTTCCCTGATAAAATGCAAAGATTTAAGTATTGATGCTCTACCACTGTCTGAACAGAATTTAACGTGGAAAGATTACAGCTGGAAATGCTCCTTTTGTGAAACACAATTCCCAACAATAGAAGAGCTTAAAATACATTCCATGCAATATCACAACAGTTGCTGCCCTTACCGTTGTGCAGACTGTAATTTCCGTCGGATTAACCTTGCAAGATTTGTTGTTCACGTAAAAAAGCACCGTAAATATTTAAATTTGACTTGTCACATATGCCACATGAAGTTTTCAACGAAACATCAACTGAATATACACTTTTCTGAGCACAAAGTTGGCCATTTCTGTAAGGGATGTTTGACCACATTTTCTTCTGATGAAGAGTTAAGTAACCACATAGAAAAGTACTATAAATTCAAACAATCAAGTCAAATAAATGATTTTGCTCAACCAACAATAGCTGAAGATCTAACATGTGTCCTGTGCAATAAAACTTTAAGTAACCCTAGCAAATTAAAAGCCCACTTGTTGATACATACAGAGAGAAAACCCGACCACATCTGTGACAAATGTGGAAAGAGCTTTTTATGTAAGGAGAGTCTGATTAGTCACATGCTAGCACATGATAATGTGAAACCTCATCAATGTGAAATCTGCAAAGCTACATTTGTAAGAAGAAACCAACTGAAATATCATGTCGGTGTTCACGATAATAAGAAACCATTTGCCTGTGAACAATGTGGTCGTTGTTTTAGACTTAAAAGGCAGCTGACAAATCACAAAATTATACACACTGATGCATTGCCTTATGTTTGTTCATTTTGTGATAAACGTTTCCGTTTTAAGGGTATCTTGATACAACATATTCGTCAACATACAGGAATTAGGCCATATTCATGTCAAATATGCCAACGTGATTTTACTAACTGGCCAAATTACAATAAACACATGAAAAGACGGCACAGCATGAATATGGCAAAGAAAAAACATACACCGTTTGGGGATTATCCTATTGATCAGAATACTGATAAAGTTATTATAACTGCTGAGACAGAAAAAATAAAAGAATGGAAAAAAGAAATCATGCGTAATCGAAAACCTGGTCGCTCCAAGTTGACAGAGGATAGTCGTATCAATGAAAAATCTCATTAA
Protein Sequence: MEPENSYCRLCAQLKHSTDMLNLQLEENKRKEISKKLDLVNANTNLHEDCLPKTVCFECVNCLDRAFDFVTSINHAQDVLNEIFVKNKKKESVEGTDDVEYIDLYIIPEDQKDSLSTMQVDNLDDDVKLNEKEEFVEELEDQKDSFNTIMQVDNLDDNIKLNKNGKRKYFNPRKKKELVEELEDQKDSFSAMQVDNLDDDVELHKKEESVEELDDPEPEIKSSKDIQSSSLIKCKDLSIDALPLSEQNLTWKDYSWKCSFCETQFPTIEELKIHSMQYHNSCCPYRCADCNFRRINLARFVVHVKKHRKYLNLTCHICHMKFSTKHQLNIHFSEHKVGHFCKGCLTTFSSDEELSNHIEKYYKFKQSSQINDFAQPTIAEDLTCVLCNKTLSNPSKLKAHLLIHTERKPDHICDKCGKSFLCKESLISHMLAHDNVKPHQCEICKATFVRRNQLKYHVGVHDNKKPFACEQCGRCFRLKRQLTNHKIIHTDALPYVCSFCDKRFRFKGILIQHIRQHTGIRPYSCQICQRDFTNWPNYNKHMKRRHSMNMAKKKHTPFGDYPIDQNTDKVIITAETEKIKEWKKEIMRNRKPGRSKLTEDSRINEKSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -