Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419609.1:335084-350680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00084 0.06 14.4 0.5 2 23 307 328 306 328 0.96

2 11 0.0085 0.61 11.2 0.1 1 23 335 357 335 357 0.98

3 11 0.0029 0.2 12.7 5.0 1 23 388 411 388 411 0.96

4 11 3.6 2.6e+02 2.9 0.5 2 23 415 437 414 437 0.89

5 11 0.01 0.75 10.9 0.2 2 20 440 458 439 460 0.91

6 11 0.0011 0.077 14.0 1.3 2 23 477 498 476 499 0.93

7 11 0.0055 0.4 11.8 0.2 1 23 506 529 506 529 0.92

8 11 0.0076 0.55 11.3 0.3 1 23 557 579 557 579 0.96

9 11 8e-08 5.8e-06 27.0 0.1 1 23 585 607 585 607 0.99

10 11 0.015 1.1 10.4 1.4 1 23 613 636 613 636 0.93

11 11 0.00013 0.0095 16.9 0.8 1 23 642 665 642 665 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00084	0.06	14.4	0.5	2	23	307	328	306	328	0.96
2	11	0.0085	0.61	11.2	0.1	1	23	335	357	335	357	0.98
3	11	0.0029	0.2	12.7	5.0	1	23	388	411	388	411	0.96
4	11	3.6	2.6e+02	2.9	0.5	2	23	415	437	414	437	0.89
5	11	0.01	0.75	10.9	0.2	2	20	440	458	439	460	0.91
6	11	0.0011	0.077	14.0	1.3	2	23	477	498	476	499	0.93
7	11	0.0055	0.4	11.8	0.2	1	23	506	529	506	529	0.92
8	11	0.0076	0.55	11.3	0.3	1	23	557	579	557	579	0.96
9	11	8e-08	5.8e-06	27.0	0.1	1	23	585	607	585	607	0.99
10	11	0.015	1.1	10.4	1.4	1	23	613	636	613	636	0.93
11	11	0.00013	0.0095	16.9	0.8	1	23	642	665	642	665	0.95

Sequence Information

Coding Sequence: ATGGATACGTCCGATCCTTTAGAACTGAAGGTGTGTCGCGCTTGTTTAGCTACCGATGTGAAATTGTTTAATATCCACGAATTGGATTTAGTTGAGGCTTTCGGCTATATTACTAGGATTTCGGTGGATTTCGCTGACGGTCTTCCTCAGTACGTCTGCTACTTCTGCCGAGCGGAACTGCAAAAATGCACAAAATTCCACACCAGATGCCGGGATGCACACTTCTATTTACAAGACATTTATATGCAACAGCTAACGATCACAACGCAACTCATCCGTGGATTGGACAGAAATAAATTCACAATTCCCTTAACGGTAACACATTTCGAAAACATCGATTTTGTATCTAAAGACTCAACAGTTTGTGACGATGGAGAATCCAAAAGCATTAATAATAATTGTCACGAAGAATTAATCACTATAGATGAAATATCAAGCAAATGTGACTCCAATTATCTATTCAATGATAACCCTGAAGATTTTGATGATCATGATAATTTAAGAGATTCAGACGATGATGATGATAAAGACAAGTTAAAAGATACGGTTTATGATGAAACCAGCTTTACTGAAAGCAAAATTGATGTGGAAGTTGATCTTAAAGATGAGATTGTTGATGAAATTGAAACGTCAAAGTTAAAAAAAGAGAATATAAGGGGACCTAAAAAAGTTAAAAAAGAGAAACTTGCAAAAGTAGCCAAAAAAGTTAAGAAGAAAAAAGAAGTAAAAGTTAAACAAACGGTCACAGAAAAGAAGACACAAAAGAAAAATTCAAAAAAGTACAACGAAAAATCTGAAGAAGATTTTGAAGAATTCTCAAAGCTATACAATGTTGATGTAGTCTGTCTGACGCTAGAGCAGCAGATACAAAGAGTGAAAGAGAAGAGAGATTCGAAAGAGTACAAGGAAGCGCGGATGTCTTGTGACGTTTGTTACAAGGGATTCATGACTGAGACCGCTTACAAACGACATATGAAGGCACATGATCCGGTGTCGGGCGCGTATCCGTGCGCGGTGTGCAGCCTGCGGTACCCGTCGCAGCGCATCCTGCGCGCGCACATGCGCCTGCACAAGCGCGAGTTCGTCTGCAGGGAGTGCGCACACGTCAATAACAGCACTACGCGGGCGAAACAGCACTCCAAATGGCACAAGGGCTTCAAGTATGAGTGCAAGATATGCCACAAACAGTGCAACACTCAGACGACGTACATGGCACACAAACGCGAGGCGCACAAGCCTGTGACGTGTGCGCAGTGCGGCGAACAGCTGGTCGGGACCATCGAACTCAACAAGCACAAGACGCACAAACACTCGCAGTCTTGTATGTCATGCGGGACAGTGTTTCACAACCCGGAGGCACTCGAGCGACACAAGAACGACGCCAGTGGGTGCAACAGTATCACCATAAGATTTCGTTTATTTGATAGTTCGTGTTGGATCTGCGGCGCCAACTTCCCGTTTAAGTCGAGTCTACATCAACACATAGAGGAGCATCACGGCGGCAAAGGCGGGGTGTTCACTTGCGAACAGTGCGGCGCTGTGTTCTCGTCGGACCGCAGTCTCGGCATCCACTACGCATACAACCACTCGAAACGAGTAAAGCACCACTCGAAAAAGGGGCTCAAGCCCAACGGAGCCAAGGCGAGCAAAGACGGGCCGCAGAGCGTGTATCTGTGCGAGATATGCGCTAAGAGTTTCCCGTGTCCGGCCAAGTTGAAGGTGCATCTTCAGATCCACACCGGTGAGAAGCCCTACCGCTGCCCGCTCTGCCCCAAGGCCTTCCGCACCAAGAGCGCGCTCGAGATCCATATAAACGTGCATACGGGTGACCGGCCCTACAAGTGCCGGCTCTGTCCGGAGACATTCAAGTCGTACGCGCAGCGATACAAACACAACCTCATGGTGCACACTCGAGAGCGCCGCCACAAATGCTCGATGTGTGACAAGACTTACGTGATCGCGTACGATTTGAAGGCGCACGTCAGATTCGCGCACCTCCACCAGCCGCGCCCGCCGCGCAACCGGCGCAGGAACGCGCAGGAACACACGTAG
Protein Sequence: MDTSDPLELKVCRACLATDVKLFNIHELDLVEAFGYITRISVDFADGLPQYVCYFCRAELQKCTKFHTRCRDAHFYLQDIYMQQLTITTQLIRGLDRNKFTIPLTVTHFENIDFVSKDSTVCDDGESKSINNNCHEELITIDEISSKCDSNYLFNDNPEDFDDHDNLRDSDDDDDKDKLKDTVYDETSFTESKIDVEVDLKDEIVDEIETSKLKKENIRGPKKVKKEKLAKVAKKVKKKKEVKVKQTVTEKKTQKKNSKKYNEKSEEDFEEFSKLYNVDVVCLTLEQQIQRVKEKRDSKEYKEARMSCDVCYKGFMTETAYKRHMKAHDPVSGAYPCAVCSLRYPSQRILRAHMRLHKREFVCRECAHVNNSTTRAKQHSKWHKGFKYECKICHKQCNTQTTYMAHKREAHKPVTCAQCGEQLVGTIELNKHKTHKHSQSCMSCGTVFHNPEALERHKNDASGCNSITIRFRLFDSSCWICGANFPFKSSLHQHIEEHHGGKGGVFTCEQCGAVFSSDRSLGIHYAYNHSKRVKHHSKKGLKPNGAKASKDGPQSVYLCEICAKSFPCPAKLKVHLQIHTGEKPYRCPLCPKAFRTKSALEIHINVHTGDRPYKCRLCPETFKSYAQRYKHNLMVHTRERRHKCSMCDKTYVIAYDLKAHVRFAHLHQPRPPRNRRRNAQEHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -