Tluc015662.2
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419607.1:1668879-1702080[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.064 4.6 8.4 1.8 1 22 473 494 473 494 0.95 2 12 2.2e-05 0.0016 19.4 3.2 1 23 511 533 511 533 0.97 3 12 0.00091 0.065 14.3 4.7 1 23 539 561 539 561 0.99 4 12 4.8e-05 0.0035 18.3 1.4 1 23 568 590 568 590 0.99 5 12 2.5e-05 0.0018 19.2 0.3 1 23 1207 1229 1207 1229 0.96 6 12 5.4e-05 0.0039 18.1 0.0 1 23 1235 1257 1235 1257 0.98 7 12 3.4e-06 0.00024 21.9 0.4 1 23 1263 1286 1263 1286 0.96 8 12 0.00076 0.055 14.5 3.2 1 23 1292 1315 1292 1315 0.96 9 12 0.00046 0.033 15.2 1.5 2 23 1322 1343 1321 1343 0.97 10 12 4.1e-05 0.003 18.5 1.2 1 23 1349 1371 1349 1371 0.97 11 12 0.013 0.92 10.6 0.0 1 22 1377 1398 1377 1398 0.97 12 12 0.0048 0.34 12.0 0.1 1 23 1405 1429 1405 1429 0.94
Sequence Information
- Coding Sequence
- ATGTCAAACTCTTGTTTTATCTGCAACATTTTGGTCCGAAACAAGGAGCCACCAGACTTGTTTACGGAACACACCACTATAGTCAATTCCGTGGCTAAGCTTTTAAGTGATATTGTGGACAAGCCCGTGTTTGAAGGCAACATCCACACGTCTGTAGTTTGTAAGCAATGCTACGCTACTTGCTTGGAGTATGACAACTCTAAGAAAAGAATGCAAGAAATAAAAACGGAACTAACAAATGCATTCAAAATGACGTTACCCAAGCATGGTTTGGAATACAATACTTATCCGAAAAAAGCACCAATAACACCAAAAAAAGTTGTTGTGTCAGCATCTAAACTACAGCCTTTGCCCCCCAACTTTGTTATTGATGTTTCAAAGATTCCCAAACAATTGAACGTAAATTCATCCCCAACAGTAAATTTAAAAGTGACCATTGGTTCAACGGTCCTAACCCATAGCTTCAAGGATGTTCAAAGCTCACCGTTGAAACTTCAAACAGTAACCGCAGACAAAGCAGTAGAATCGAACATAGCTAATTCATTATCATCGATTCTTGGTATAAAAACATCAACATCCGTCTCGTCAAATAGTTCAGTATTAACATTCAATGTTAATTCATTATCGAAAGACTTTTGTTTGACAACTAATAGTGAAACGAGTGAGATGAAACAGGAAGTGATTGATAAAGATGTTGATGATGATGAAGATGATAATAATGATGATTTTAATAATGATGAGCAGCCAATGGAGATTGATGAAGAATGCACGATAACTAAAATAACCGGTACAGAACATGCACACGATATCACAGAGAATGACAATGACGAGTCAGATAAGAGGTTGTTTGATGTGAGCTTGTTGCCTGTTGAAGAGGGAGCTGATAACGACACCATTTTGGGAAAACTGCAGATCCTGGATAAAGATGATGATGATGATGAAGGGGATGAAGAGGGCAAGTCTATAATGATGACGGACGAGTCTGGCGCGGTGATCCGGTTCATGGTGTCGGGCCAGCGCCTCGTGTACGACAACGGAGCCCTCACGCTCGCCGACCGCAGCCGGACGGACCAGGGAGATGGCGGCGATTCCAACGACGACGACGAAGAAGCTCAAATTGAGTTGCAAGTGTCCGGTGACGAGGAAACTGCCAACGCAATCATAGCAGCGGCGAAGGAACAAGGGGGCGCGTTCATAAAGGTGGAGTCCGGCGAGATGTTCCGCGTGAAGTCCGTGGAGGGGGGGGGAGCCGCGCCGCTGCGCATGGTCGACGTGAGGGGGAACAAGTTTAGCTGCTTGCTCTGTCACAACACACACAAAGAATCAACTTCAGAATCTCCAAGCAAGGAGTCTATAGTGGTACGGACGGCAGACGAGATGATGATTCACTTGCGCACCGAACACAACGCACGGCTGTACATATGCAAACACTGCAAGAAGATTATGAGGAAACGGACAGAATACCAGGCGCACCTTAGGAGTTGCCAACTGTGCCCCGCAGCCGCCCCCGCCGAGAGCAAGGGTAAACTGCACGAGTGTGCACACTGCGGAAAGAAGTTCACGTCCCGCACACTTCTGCAAGAGCATCTAAACGTCCATACTGGCGCGCGGCCCTACCGCTGCTCCGTGTGCGACAAGACCTTCGCCAGCAAGTACACGCACCAGACGCATCTCAAGACACACATGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTCCATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGTCTTCGTTTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGTGGCCGCGTCCGTTCAAATGTGAGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGTGGCCGCGTCCGTTCAAATGTGAGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAATGCTCGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGTGAGGATATACATCCTACATCCTACTATAGTAGACACAGGAGCGGCCGCGTCCGTTCAAACGTGAGGAGTGTCCCAAGTCGTTCCTCTCGCAGCAGAACCTCACGCAGCACGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGCAGAACCTCACGCAGCATGCCAAGACACATCTGGGGATCAAGGACTTCGTCTGCGGGACTTGCGGCAAGGCATTCGGCACGCAGCACAATCTGGAGGTACATTACGTGGTGCACTCTAAGAGCAAGCCGTTCGTGTGCGGCGCGTGCGGGAAGCCCTTCGCGAGGAGGGCCGAGGTCAAGGACCATATGCGGATACACACAGGCGAGCGTCCGTTCTCGTGCGACATATGCGGCGCGGCGTTCACTCAGCGCTCCAACCTCAACTCGCACAAGCGCGCCACGCACATGGACGACAAGCGCTACCACTGCCAGGACTGCCCCAAGAGGTTCAAACGACGCAGACTGCTGGACTACCACGTAAAAGTGTCTCACACGGGCGAGCGTCCCCTCGAGTGTGAGATATGTCACGCGCGGTTCGTTTACCCCGAGCACTATAAGAAACATGCGCGAATACACAGCGGCGACAAACCTTACGAGTGCGAGGTGTGCGGCAAAACGTTTAACTCCCGCGACAACCGCAACACGCATCGCTTCGTGCACAGCGACAAGAAGCCGTACGAGTGCCTCGTGTGTGGAGCCGGCTACATGCGGAAACAACTGCTGTACGCACACATGAACACCACCCGACAAGAAGCGCAGTACGAGTGCCTCGTGTGTGGAGCCGGCTACATGCGGAAACAACTGCTGTACGCACACATGAACACCACCGGTCATCTAGCGGAGTCCATAGTAGTCAATCAACCTAGGGTCCAAAAAGTTAACGAAAATTTATTTGAAACTAAAGGCCAAGCGACTGAAGAATTAGAAGCAAGTAATAGCGAATCAAGAAGTGGGGAAGTGGTTATTTCTGAAGCTCAGGACGCGCCACAATACATCATTGATGAAAAAGGATCTATCAATATAGTTCAGGAATCGGACGACCCAGCCCTACTAACTCTTATTCAAAACCTGGACGGGAGCAAGACGGGCGAGATACAAACAATCACCGCCGAGCAGCTCGGCGAGCAAGTACAGGTGGTGACGGCAGACGAAAATGGCGCCATTAGAGTGGTACAGCTGCATTTAGGGGCCGCTAACTCTGCTTGGATAACGCAATAG
- Protein Sequence
- MSNSCFICNILVRNKEPPDLFTEHTTIVNSVAKLLSDIVDKPVFEGNIHTSVVCKQCYATCLEYDNSKKRMQEIKTELTNAFKMTLPKHGLEYNTYPKKAPITPKKVVVSASKLQPLPPNFVIDVSKIPKQLNVNSSPTVNLKVTIGSTVLTHSFKDVQSSPLKLQTVTADKAVESNIANSLSSILGIKTSTSVSSNSSVLTFNVNSLSKDFCLTTNSETSEMKQEVIDKDVDDDEDDNNDDFNNDEQPMEIDEECTITKITGTEHAHDITENDNDESDKRLFDVSLLPVEEGADNDTILGKLQILDKDDDDDEGDEEGKSIMMTDESGAVIRFMVSGQRLVYDNGALTLADRSRTDQGDGGDSNDDDEEAQIELQVSGDEETANAIIAAAKEQGGAFIKVESGEMFRVKSVEGGGAAPLRMVDVRGNKFSCLLCHNTHKESTSESPSKESIVVRTADEMMIHLRTEHNARLYICKHCKKIMRKRTEYQAHLRSCQLCPAAAPAESKGKLHECAHCGKKFTSRTLLQEHLNVHTGARPYRCSVCDKTFASKYTHQTHLKTHMERPRPFKCSECPKSFLSQQNLTQHAKTHLGIKDFVCGTCGEDIHPTIVDTGAAASVQMLGVSQVVPLAAEPHAARQDTSGDQGLRLRDLRRTSRSTPRHIWGSRTSSAGLAVRIYILHPTIVDTGAAASVQMLGVSQVVPLAAEPHAARQDTSGDQGLRLRDLRRTSRSTPRHIWGSRSSFAGLAVRIYILHPTIVDTGAAASVQMLGVSQVVPLAAEPHAARQDTSGDQGLRLRDLRRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGEDIHPTSYYSRHRSGRVRSNVRSVPSRSSRSRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGEDIHPTSYYSRHRSGRVRSNARSVPSRSSRSRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGEDIHPTSYYSRHRSGRVRSNVRSVPSRSSRSRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGEDIHPTSYYSRHRSGRVRSNARSVPSRSSRSRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGEDIHPTSYYSRHRSGRVRSNVRSVPSRSSRSRTSRSTPRHIWGSRTSSAGLAQNLTQHAKTHLGIKDFVCGTCGKAFGTQHNLEVHYVVHSKSKPFVCGACGKPFARRAEVKDHMRIHTGERPFSCDICGAAFTQRSNLNSHKRATHMDDKRYHCQDCPKRFKRRRLLDYHVKVSHTGERPLECEICHARFVYPEHYKKHARIHSGDKPYECEVCGKTFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKQLLYAHMNTTRQEAQYECLVCGAGYMRKQLLYAHMNTTGHLAESIVVNQPRVQKVNENLFETKGQATEELEASNSESRSGEVVISEAQDAPQYIIDEKGSINIVQESDDPALLTLIQNLDGSKTGEIQTITAEQLGEQVQVVTADENGAIRVVQLHLGAANSAWITQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -