Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419611.1:4203160-4207542[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0078 0.56 11.3 3.4 1 23 61 83 61 83 0.97

2 16 0.043 3.1 9.0 2.2 1 23 155 177 155 177 0.97

3 16 0.65 47 5.3 1.0 1 23 181 203 181 203 0.93

4 16 0.02 1.4 10.0 0.4 1 23 208 231 208 231 0.94

5 16 0.068 4.9 8.4 1.5 1 23 237 260 237 260 0.93

6 16 0.00063 0.045 14.8 0.6 1 23 267 290 267 290 0.97

7 16 0.00028 0.02 15.9 0.2 1 23 296 318 296 318 0.96

8 16 0.042 3 9.0 0.7 1 23 434 457 434 457 0.96

9 16 2.4 1.8e+02 3.5 0.1 3 23 483 504 482 504 0.94

10 16 0.00087 0.062 14.3 0.1 1 23 528 550 528 550 0.98

11 16 9.6e-05 0.0069 17.3 0.2 1 23 554 576 554 576 0.98

12 16 0.0013 0.092 13.8 2.1 1 23 581 604 581 604 0.95

13 16 0.023 1.6 9.8 0.4 2 23 611 633 611 633 0.92

14 16 0.084 6 8.1 6.4 1 23 640 663 640 663 0.96

15 16 0.00017 0.012 16.6 5.2 2 23 670 691 669 691 0.96

16 16 4.9e-05 0.0035 18.2 0.4 1 23 697 719 697 719 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0078	0.56	11.3	3.4	1	23	61	83	61	83	0.97
2	16	0.043	3.1	9.0	2.2	1	23	155	177	155	177	0.97
3	16	0.65	47	5.3	1.0	1	23	181	203	181	203	0.93
4	16	0.02	1.4	10.0	0.4	1	23	208	231	208	231	0.94
5	16	0.068	4.9	8.4	1.5	1	23	237	260	237	260	0.93
6	16	0.00063	0.045	14.8	0.6	1	23	267	290	267	290	0.97
7	16	0.00028	0.02	15.9	0.2	1	23	296	318	296	318	0.96
8	16	0.042	3	9.0	0.7	1	23	434	457	434	457	0.96
9	16	2.4	1.8e+02	3.5	0.1	3	23	483	504	482	504	0.94
10	16	0.00087	0.062	14.3	0.1	1	23	528	550	528	550	0.98
11	16	9.6e-05	0.0069	17.3	0.2	1	23	554	576	554	576	0.98
12	16	0.0013	0.092	13.8	2.1	1	23	581	604	581	604	0.95
13	16	0.023	1.6	9.8	0.4	2	23	611	633	611	633	0.92
14	16	0.084	6	8.1	6.4	1	23	640	663	640	663	0.96
15	16	0.00017	0.012	16.6	5.2	2	23	670	691	669	691	0.96
16	16	4.9e-05	0.0035	18.2	0.4	1	23	697	719	697	719	0.99

Sequence Information

Coding Sequence: ATGCACGTTTTCTCATTTTTAGGTGAAGGTCCGATCGAGATACAAGAAGACAATACAAAGCGAAGCAAGCTCGCCTACTCTTGTGCGAAGGGCATCGACGATAGACCGTCTAGAATCAGACACGCAACAATACTTCTAGAAAAAACAAAAATATGCCCATTTAAGTGGCTGAAGAATTTGTATCATTGCTTTTACTGTGATGACAAATTCTCTGATCTAGGCGATTTACGACACCATACAGAAGTGCATCAACCTAGCGCGAAAGACATCGAGGTTATACTACATAAAATGAAAAAATATGAACTTGTAAAAGTAGATATAACTAATGTTAACTGTATGAAATGTAGCGATGATATCCCTGATTTTGTTTCGCTAAAAACTCATTTGTTTGAAGTGCATAAAGAGAATATCGATGTTAAACTGTCTGATGGTGTATTGCCTTTTAAAATTACAAAAGTAGGCTTCAATTGTGCGTTATGTTCAAACAAATTCGATGAGTTTACGTCTTTAAATCACCACATGAATGTGCATTTTCAAAATTTCATTTGCGAGACTTGTGGGTCCGGTTTTATGACTTTAGAGAGGTTTCGGACACACTCGTTTTCGCACGAGACTGGCTCTTTCCCTTGCGAGGTTTGCTACAAAGTCTACCGCTCAAATAACGCTAGGAACGAACACTACGATCGGATACACAAGAGAGTCAAAAGACATCGGTGTCCGCAATGCTCGGATACATTCGCAAATTATTATCAGAGAAACAAACACATAACAGCGATCCACGGGGGGAAACTTAAGGAGTTTAAATGTCCTGTTTGTTACAAACTATTTACGTCTAGCGGAAAATTAGGGGTTCACAAGAAAATGGTGCATTTGAAAATGAAAAGGTTTGCCTGTGAATCTTGCGAATGGCGGTTTTATTCTAAATCTGAATTGGAAGCGCATAAGATCTCGCATAGTGGATCGGATGCAAATTTGAGCGAGCAGAGGCGGATAGTGCCTCTATTCCAAGTGGCATACGACAGGAGTCTATGTAGGCCCCTCGGAACACTATTTGACTTCAAAAAATTGAAGCTGAAAGCTACCGCACTAAGAGATACAAGATTAGAATCAGATCACTCTAGAAGCGCGTCCCCAGTTGATATAACGTCTACACAACCAGAAGAAATAGCCACACATCCTACAGTTTCTGCTGTCCGCGTTCCTAAAGGTAAAGATTCTAAAACGCCAGACGTAAGGCAGAACGCGTTAACAGTTTTCGAATTCTCAACAGTCTATCCTTTTATTTACGGGAATAACAAATTCAAGTGTTTCGTCTGCTCGCAGCCTTTCTTGGAAACCTCCTTGCTCCGACAACACATGAATGAAAGTCATACTTTTGCACCATTGAAGAGACTTGTAAATAACAAGCGGGAGAATATATTAAAAGTTGATGTCAGTCAGATTTTATGCAAAATTTGTTCTTACGCACCCAAAGATTTAATTGAACTGAAAGAGCATTTGAAAGGAGAGCACAACAAACCAATTGACCCTCAGCTTCAAGACAACATGATCCCTTTCAACCTGGATGGTGGTAAAGATTCCTACCAATGCGTCATTTGCCAACAAGTCTTCATCAAAGTCCGCCTCCTGGTCATCCACATGAGCGTCCATTTCAACAACTATTCCTGCGAGATTTGCGGGTCAGTGTTCATGACCTTGCGTCTCCTGAAAAAGCATCTAGAAGTCCACGAGAACGGGAATTTTCCATGTGACAAGTGCAACAAAGTTTTTACGACCACGCACAAGAGGTCTTTGCATATCCGCGGTGTTCATTTGAAACAATATCCTCGACGCTGTCCGATGTGCCCGGAACGTTTCAATTCAAATTACAGGCGTACTATACACCTCCAAGACGTCCACAATGTGTCTACAAGAGTCCACAAATGTCTTCAATGCGGGCGAGCGTTTAATCTGAAGTACCATCTGATTTGTCACACGAGATCCGTTCACCTTCAAGAAAGGAATCAGCAATGTGAGCTTTGTCACCAGAGGTTCTGTAATAAGGAGACACTTAAAAGGCACATGGTCATTCATACCGGGGAGAAGAATTATAAGTGTGAGGTGTGTGGTGTAGCGTTTTTGAGGAGGAAGAATTTGAAAGATCATTTGCGGTTGCATGATATCAGCTAA
Protein Sequence: MHVFSFLGEGPIEIQEDNTKRSKLAYSCAKGIDDRPSRIRHATILLEKTKICPFKWLKNLYHCFYCDDKFSDLGDLRHHTEVHQPSAKDIEVILHKMKKYELVKVDITNVNCMKCSDDIPDFVSLKTHLFEVHKENIDVKLSDGVLPFKITKVGFNCALCSNKFDEFTSLNHHMNVHFQNFICETCGSGFMTLERFRTHSFSHETGSFPCEVCYKVYRSNNARNEHYDRIHKRVKRHRCPQCSDTFANYYQRNKHITAIHGGKLKEFKCPVCYKLFTSSGKLGVHKKMVHLKMKRFACESCEWRFYSKSELEAHKISHSGSDANLSEQRRIVPLFQVAYDRSLCRPLGTLFDFKKLKLKATALRDTRLESDHSRSASPVDITSTQPEEIATHPTVSAVRVPKGKDSKTPDVRQNALTVFEFSTVYPFIYGNNKFKCFVCSQPFLETSLLRQHMNESHTFAPLKRLVNNKRENILKVDVSQILCKICSYAPKDLIELKEHLKGEHNKPIDPQLQDNMIPFNLDGGKDSYQCVICQQVFIKVRLLVIHMSVHFNNYSCEICGSVFMTLRLLKKHLEVHENGNFPCDKCNKVFTTTHKRSLHIRGVHLKQYPRRCPMCPERFNSNYRRTIHLQDVHNVSTRVHKCLQCGRAFNLKYHLICHTRSVHLQERNQQCELCHQRFCNKETLKRHMVIHTGEKNYKCEVCGVAFLRRKNLKDHLRLHDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -