Tluc008030.2
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419596.1:4726037-4737864[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.001 0.072 14.1 2.1 1 23 531 554 531 554 0.96 2 8 3.5e-06 0.00025 21.8 0.1 2 23 571 593 570 593 0.94 3 8 0.00021 0.015 16.3 0.2 2 23 601 622 600 622 0.97 4 8 0.00046 0.033 15.2 2.5 2 23 640 661 639 661 0.96 5 8 0.0012 0.088 13.8 0.1 1 21 667 687 667 688 0.96 6 8 0.00027 0.02 15.9 0.1 2 23 731 752 730 752 0.96 7 8 9.2e-06 0.00066 20.5 2.7 1 23 758 780 758 780 0.98 8 8 2e-05 0.0014 19.5 0.3 1 22 786 807 786 807 0.97
Sequence Information
- Coding Sequence
- ATGGATGGATTTTGCAAAGCTTGCTTAGTAAAATATGAAGATCTCTCTCAATTGCTTCAATATACGGAGAAAAATAGGCGGTTGTTTGTGTATTCCACAGGATTGCAGGCAAAACAATCCGACACATTTCCATTCCAAATATGCCAGTGTTGTTATTTGAAAATGAAGAATGCCTGCCAGTTCAAGAAACAGTGTCGGACGTCAGATAAAAGGTTGAACAACTTCCTGTCACTTAAGGAGGCTGGAGAAGAGACGGACTTCTCTACTTATTTGCAGAATAACGATGGATCTGCATTATTTAAGTTTCCTATCAACGGCCACAGTACACCGTCATTTCAGAAACCAAAGGATGATGATAACGTGTCGACGAGCACGAGTATCCGCAACTTCATGACGGATATCTTACGCGAGGACGAGATACCCGACACCGAAGCGCACATCATTCGCGAGATGATCGAACAAGAGGCCGATGTTCTGGACGACTCGCTCGACTCCCATTGGCTGCAGGACGACATCTCTATTGCCAGCGACTTCCGTTTCAGCCCATTCTCAACACCGCATTCGAAGCGCACCTACCAGCCCCTGCTTTTTAATTACTCACCGGTGAAGGAGGAACATCAAGTGAAAGAAGAACAGGACACATGCAAAAGAAAACTCTTGTCAGCCAAAGAACTTCTTTTTAACTCAAAATCGTGCTCAAGTAGCCAAACCGAAAGTCCCAGGAGCCAAAACGGTGAAACAGAACGAAATGGTTTCCTTGCTGCTAAAAAGATGCTTTTGAGTCAAAGCTTAAGTGCCAGCGAAGTTAAAACTGAATCGTTATCTGAATCGGAAGATCAAATCGATCAACAATCCTACATAGCGAAAAAAAGAATTCTTCTTACATCAAATAACAAAGAAATGAATTCACAAAATGTTGACATGGAAACATACTTAGCGACTAAAAGTATTCTTAATTCTAAATCAGATTCAAATGAAGAAGTCAAACATTTTTTTTCAAAGACACCAAATGATATAGCTGTTAAATCAACGTATGAACCATTAAATGAGAACAATTTAAATCAAAGTCCACATATTTCTCGTAAAGGATTTTATGTCGAAACTACTGAAACAAATGAAAATACTATTCAAATCGTTGACGTTGGCAACGCGGGTGGAAAAAAGGATATTATTGATAAAAATCTAGAAAAGATATTGAATACTACAAATGATGATGACGTAATTTCCTTGAGCGCGTTACTTGCGAGTCCATCCAGTGAGTCTGTTCGACCGTGTAAAGATATCATCGCTACACCGTCAGTTCATCAAGGTTTATCTGGAGCAAACACCCCTACAATAGCAAACATACTCTTTGGTGAGAAGTTAGATGATAATAAAAATGAGAACATCCAAGAAAAAGATCAGGACCAAGCCAATGGAAGTATCGCCGACAAAAGTGACAAAGCCAATATTCTTGACGACTTTTTCAATAAGGAAACTGGTAAATATATTGGCGACAATCAGGATGACCAAAAAGAAATTTTCGAAGACTATATAAACCTAAATGTAATTAATTCGATGCCTGGCAAAGTTCGGTACGATCTGACGGATTTTTCTTGCAAGAAATGCAATTACAGGTATAAAAGTGAAAGAGGATTGAAGATACATTTGTCAAAGGTCCATAACTTGAAATTGATGAGAATTAGAAATAAGGAGTCTAGAGTAGACATACCTTGCGATACATGTGGGAAAGTGTTCGCTCTCAGATCAAATTTAACTAAACACATTAAAGCTGTACATATAAATCCAAAATCAGCGCAGGTCTGTACTGTGTGCTCAATAGAGTTTACTACCGAGGCTAGATTAAATAATCACATGAGAATTCACGACGGCGTTAAAAACGTAACACCAAAAGATAGACAAAATAAGTATAATCTAATGTGCAACATCTGTGGGCACTGCAGCACTAACCTTTGGAACCTCAAGACACACATCGCGCGCCACAACAAGAGCTACAGCTTCAAATGTGACCCGTGCGGCGCCGGCTTCTACAGGAAGAACGACTTGCAGATCCATATGAGAGCTACAGCTACAAGTGTGACCGTGCGGCGCCGGCTTCTACAGGAAGAACGACTTGCAGATCCATATGAGGAAGAACGACTTGCAGATCCATATGAGGTAACACTACTACAAGACAAGAGCTACAGCTCCAAGTGTGACCCGTGCGGCGCCGGCTTCTACAGGAAGAACGACTTGCAGATCCATATGAGGATTCACATGAACGAAAAACCGTTTAAGTGTTACCAATGCTCCGAAAGCTTTAGACGAAAGGATCAACTACAAGTCCATCTGAAGAACCATATAGGAGAACGCCCATACATTTGTAAAATATGTGAAAAGAAATACGCTACCAGCGCAAAATTAAAAGCCCACATGAAAACATCTAGAACATGCCAAAACATAAAACTACAGACCGCTATTAAGGAAAATAAAGCGATAGAAGAAAGCATTGAACAGCTTTATGTTGCTGAAGCACTAGTTACGCTTGGAAACGAGAAAATACAAGAAAAAATGGAAGTGAGTGATACACAAGACGATGAGACAACCGCTAAAGCAGTTGATGAACTGCAGGACATTAAAATGGAAGATCTGTTGGAAAATGAGAAAGAAAAAGTACTGCAAGACGATGATAAAATTTCCTTATCTGATATGTTTACTATACCAATTGTATTAAAAGATTAA
- Protein Sequence
- MDGFCKACLVKYEDLSQLLQYTEKNRRLFVYSTGLQAKQSDTFPFQICQCCYLKMKNACQFKKQCRTSDKRLNNFLSLKEAGEETDFSTYLQNNDGSALFKFPINGHSTPSFQKPKDDDNVSTSTSIRNFMTDILREDEIPDTEAHIIREMIEQEADVLDDSLDSHWLQDDISIASDFRFSPFSTPHSKRTYQPLLFNYSPVKEEHQVKEEQDTCKRKLLSAKELLFNSKSCSSSQTESPRSQNGETERNGFLAAKKMLLSQSLSASEVKTESLSESEDQIDQQSYIAKKRILLTSNNKEMNSQNVDMETYLATKSILNSKSDSNEEVKHFFSKTPNDIAVKSTYEPLNENNLNQSPHISRKGFYVETTETNENTIQIVDVGNAGGKKDIIDKNLEKILNTTNDDDVISLSALLASPSSESVRPCKDIIATPSVHQGLSGANTPTIANILFGEKLDDNKNENIQEKDQDQANGSIADKSDKANILDDFFNKETGKYIGDNQDDQKEIFEDYINLNVINSMPGKVRYDLTDFSCKKCNYRYKSERGLKIHLSKVHNLKLMRIRNKESRVDIPCDTCGKVFALRSNLTKHIKAVHINPKSAQVCTVCSIEFTTEARLNNHMRIHDGVKNVTPKDRQNKYNLMCNICGHCSTNLWNLKTHIARHNKSYSFKCDPCGAGFYRKNDLQIHMRATATSVTVRRRLLQEERLADPYEEERLADPYEVTLLQDKSYSSKCDPCGAGFYRKNDLQIHMRIHMNEKPFKCYQCSESFRRKDQLQVHLKNHIGERPYICKICEKKYATSAKLKAHMKTSRTCQNIKLQTAIKENKAIEESIEQLYVAEALVTLGNEKIQEKMEVSDTQDDETTAKAVDELQDIKMEDLLENEKEKVLQDDDKISLSDMFTIPIVLKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -