Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419608.1:1306579-1308654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.3 1.7e+02 3.5 3.5 1 23 225 250 225 250 0.88

2 10 0.00053 0.038 15.0 0.7 1 23 256 278 256 278 0.99

3 10 0.00053 0.038 15.0 4.9 1 23 284 307 284 307 0.97

4 10 0.038 2.8 9.1 0.0 2 21 314 333 313 334 0.93

5 10 7.3e-06 0.00053 20.8 1.8 2 23 353 374 352 374 0.95

6 10 1.4e-06 0.0001 23.1 2.7 1 23 381 403 381 403 0.98

7 10 2.4e-05 0.0018 19.2 0.2 1 23 409 431 409 431 0.97

8 10 7.3e-06 0.00052 20.8 2.1 1 23 437 459 437 459 0.96

9 10 0.00021 0.015 16.2 2.8 1 23 465 487 465 487 0.98

10 10 0.00043 0.031 15.3 3.5 1 23 493 516 493 516 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.3	1.7e+02	3.5	3.5	1	23	225	250	225	250	0.88
2	10	0.00053	0.038	15.0	0.7	1	23	256	278	256	278	0.99
3	10	0.00053	0.038	15.0	4.9	1	23	284	307	284	307	0.97
4	10	0.038	2.8	9.1	0.0	2	21	314	333	313	334	0.93
5	10	7.3e-06	0.00053	20.8	1.8	2	23	353	374	352	374	0.95
6	10	1.4e-06	0.0001	23.1	2.7	1	23	381	403	381	403	0.98
7	10	2.4e-05	0.0018	19.2	0.2	1	23	409	431	409	431	0.97
8	10	7.3e-06	0.00052	20.8	2.1	1	23	437	459	437	459	0.96
9	10	0.00021	0.015	16.2	2.8	1	23	465	487	465	487	0.98
10	10	0.00043	0.031	15.3	3.5	1	23	493	516	493	516	0.96

Sequence Information

Coding Sequence: ATGGAAGACTCCGAGGATACCTACTGCAGACTTTGTGCTGAACCAACGCCGAAGGGCCAGCTAATATCGGCCGACGAAGATGTTGCTATTAGTTCCAAGATCGCTACCAAACTCTTGTGGATAAACATTGATATTTCTACAAGTAATTTCTTACCAACCACGATTTGTTTCGCTTGTTTTGATTCCCTGGAACGTACCTGGTCGTTTCTGCACAATGTTAGGAATGCACAGGATAAACTTTGTGAGATATTTTCGTGTAAAAATGGGACTAAAGTTGACGGGAAGAACGAAGTTAAGCCAGACAATTTGGACAACGCTGGGAGGCCAGTGGACACTAACTGGCAGTCGTTTCAGAATGCCAAAACTGAGATCAAAATTGATCCAGAAGAAAATGCAGACATCATAACGACCGTAGATCCGAGCACTTTAATAAACATAGAAGTCAAAACGGAGAACGATTTGGACGATGACTACCATTTAAATAACAGTGATGGATTCAATACAACGGACTCAGACATGCCTTTACTAAAAACGGTGAAAAGAAAAAAAAAGAAAATTAAAAAGAAGAAGAAAATAAAGTTTGATCCAGAGATATCAGCTGAAGATTTGCTCAAAACTGAAGTAGATGCAGAACCGTTAGACATTTCATCGTTGAACATGATCTGGGATGACTATACATGTCACTGTGCGCAGTGTAACGCATTATGCAAAAATATATCTTCTTTAAGACTCCACGCTATCCAAATACACTCCCGCTGCTGCACATTCAAATGTTCAGACTGCGGTAGAGTCATAGGTAACTTCAAAACATTTGTCAACCATGTACGCACACACAAAAATGTATTACGGTACTGCTGTGAGTATTGCAATAAACAGTTCACTTTGACTACGTACCTGAAGAAACATTTGAGCACCGTTCATGGGGACGCACCGTTGATGACTTGTCAAACTTGTGGTGCGTACTTTGACAGCGAAGAACTTCTTCAGGACCACTTAATAATATATTCGAAGAGCAGTAAAAAAGGTAGGAAGAAGGAGAAATCTGAATCGGATCTAAAATGTGATATTTGCAGTAAAGAGTTCAAATCACGCAGCAACTTGCAGCAACATAAGTTCGTTCACACAGAACGATCTAGAGACTTTTCTTGTCACGTCTGCGGAAAAATGTTCTTCACAAAAGGGACGCTAAGCACTCATATGATCACACATGAAGACACAAAACCGTTTAAGTGTGAATATTGTCCGTTAGCCTTCCGTGCTCGAGGTAACCTCCAATCTCATATAAGTTTACATTCCGGTGCTAAACCATTTGTCTGTGAACAGTGCGGCAAGTCATTCCGTGTCAAACGTCATTTGAAATCTCATTCGATAGTGCATACGGACTTGATGCCTTACATTTGTAATTTCTGTAACAAACCATTCCGTTTCAAAACCCGTTTAAACCTGCATTTAAGGCAGCACACTGGTGCTAAACCGTATACTTGCATTTACTGTCAAAGGGACTTTACTAACGGTTCCAATTTCAAAAAGCATATGAAGAGACGTCATAATGTAGATACTTCTAAGAAACGTTATAATAATATTGTGGATGTAGCAGGGGATATTAGTGAAGGACAAAGTGAAGCTACGTAA
Protein Sequence: MEDSEDTYCRLCAEPTPKGQLISADEDVAISSKIATKLLWINIDISTSNFLPTTICFACFDSLERTWSFLHNVRNAQDKLCEIFSCKNGTKVDGKNEVKPDNLDNAGRPVDTNWQSFQNAKTEIKIDPEENADIITTVDPSTLINIEVKTENDLDDDYHLNNSDGFNTTDSDMPLLKTVKRKKKKIKKKKKIKFDPEISAEDLLKTEVDAEPLDISSLNMIWDDYTCHCAQCNALCKNISSLRLHAIQIHSRCCTFKCSDCGRVIGNFKTFVNHVRTHKNVLRYCCEYCNKQFTLTTYLKKHLSTVHGDAPLMTCQTCGAYFDSEELLQDHLIIYSKSSKKGRKKEKSESDLKCDICSKEFKSRSNLQQHKFVHTERSRDFSCHVCGKMFFTKGTLSTHMITHEDTKPFKCEYCPLAFRARGNLQSHISLHSGAKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYICNFCNKPFRFKTRLNLHLRQHTGAKPYTCIYCQRDFTNGSNFKKHMKRRHNVDTSKKRYNNIVDVAGDISEGQSEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -