Tluc019035.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419611.1:1294672-1297618[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0019 0.14 13.2 1.1 1 23 28 51 28 51 0.95 2 15 0.017 1.2 10.3 4.4 3 23 124 144 122 144 0.96 3 15 0.00067 0.048 14.7 0.5 1 23 148 170 148 170 0.97 4 15 0.002 0.14 13.2 0.2 1 23 177 200 177 200 0.97 5 15 1.2 84 4.5 2.3 2 23 208 230 207 230 0.86 6 15 4.4e-05 0.0032 18.4 0.7 2 23 236 258 235 258 0.96 7 15 0.34 24 6.2 1.8 1 23 264 287 264 287 0.91 8 15 1e-05 0.00072 20.4 1.7 1 23 293 316 293 316 0.98 9 15 0.99 71 4.7 1.8 2 23 372 394 371 394 0.89 10 15 0.015 1.1 10.4 0.3 5 23 408 427 406 427 0.95 11 15 0.034 2.5 9.3 2.2 1 23 433 456 433 456 0.95 12 15 2.7e-06 0.00019 22.2 0.1 2 23 463 485 462 485 0.95 13 15 2.3e-05 0.0017 19.2 1.3 1 23 491 513 491 513 0.95 14 15 0.1 7.5 7.8 0.3 1 23 519 541 519 541 0.98 15 15 0.0014 0.099 13.7 0.4 2 23 550 572 549 572 0.93
Sequence Information
- Coding Sequence
- ATGAAGAAACAGTGGCACAATCTTACTACTTTACTCAAGTTCTCTAATGCAACCCCTTTTAAAGACCGCAATGACGCTGGGTACACTTGCGCTTACTGCTTTAAGTCCTACCCGGACCCTGACGTACTCAGAAGCCATACACATAACGAACATGACAAAGAAAAACCTACTTACAAAGCTGGCACCGGAATGGCTAATTTCGTTGCCTTTCTGGACATAGTAGACTTAAAATGTTTAATCTGTGAAACACCTATGGAGAATCTTAAGGTTCTAATGGAACATCTGTCGTCTGAACACGATAAGCAATTTTTCTTTGGCGTCAGGGATTATTTTCAGCCGTACAAACTGACGAATAACCAGCAAATTAACTGCTGTCTATGCAATGAGCGGTTTCACAATATGAAACTGTTGACGCagcatatgaacgttcattacagaaattttatttgcacgacttgcggcgctggatttgtCAATAGCTTTCGATTGAACCGACACGAAACGACGCACGGCAAAAAGAAACTTAACTTCCCTTGCAAAATTTGTGGCCTCACGTTTGATGCTGAGTCGAAAAAGAAAGCTCACGTGAATACTGAGCATAAGGGTATAGCAGGAGATAGCGTCTGCCAGATTTGCAAGGCGAGATTCAAGAATTACTACCAAAAGACGTGTCACATGGCCCAAGTACACAAAGTTGAAGGAATGAAATGTGATATGTGCGAGAAAAGATTCAGTCTAAAATCGACCTTAGTACTTCACATCCGCAACGTGCATTTGAAAGAGAGACCGTATGAGTGTTCTGTATGCTCAATGGGGTTCTTTTTCAAAAGACATATGTTGGGGCACTACATGGCAACGCATACGAATGAGAGGAAGTTTAAATGTGAAGTTTGTGGTAAAGCTTATGCGACGCAAAATTCTAAACGGAAACATATGAAGAAAAACCATGGTGATACCAAGGGAAAAAAATCGAAGAAGATAACTAAGACGGCTTTGAGGAAAGCCAGGAGCGCAGCAATGGGGAGAGTAAGAGCACATAAGAAAAATCTCATAAACATTCTGATGTTTTCCAATGCGAATCCGATTAGAGACAAAGACATGCTGCAAGGCATACAGTGCCATTACTGCAAGACTAAAATGATAGAGTCCAAAGATCTCAAAGAACACTTCGTGAAAGAGCATAGAAGCGAAGAGTTCATGGCTTCAAAAATGAAAGAGTTCATCTGCAAAAAGATTTTCAGTAGCAAATCCCGAGTGAACCAGCATGTCAAAATGGTGCATTTTAATAAGAAACGATACAAATGCAATTATTGCGAAGAGCGCTTCCAAGAGTTCAATATGAAGTTGCGTCATATGAAAAATGTTCACGATGTGAACTTGGAGTTGCCTTGTCAAATATGCAACAAGATATTCGTAACGCCGAGTTCTCTGAGAATGCACATCCGAGCGTACCATTTGTGTGAAAAACGTTTTCTTTGTTCCGAATGCGGTAAAAGATTCTTTACTCAAACGTTGCTCGTGAATCACCGAAAGATTCACAGCGGCTTTGATAGTTTCACTTGTGAGATTTGCCTTGCTGAATTTCTGAGCAAAGTGAGATTACGGGAGCATATTAAATCGCATACTCGCGCGAAAAGCTCGGCGCAATCGTGCCTCTTCTGTTCCAAAGAATTTTCAACGGAAGCGTCATTGAAAATGCATATAGAAAATGTTCATTCGAATCTGTTTGATGTTGAAGAAGACAAAACGGGttga
- Protein Sequence
- MKKQWHNLTTLLKFSNATPFKDRNDAGYTCAYCFKSYPDPDVLRSHTHNEHDKEKPTYKAGTGMANFVAFLDIVDLKCLICETPMENLKVLMEHLSSEHDKQFFFGVRDYFQPYKLTNNQQINCCLCNERFHNMKLLTQHMNVHYRNFICTTCGAGFVNSFRLNRHETTHGKKKLNFPCKICGLTFDAESKKKAHVNTEHKGIAGDSVCQICKARFKNYYQKTCHMAQVHKVEGMKCDMCEKRFSLKSTLVLHIRNVHLKERPYECSVCSMGFFFKRHMLGHYMATHTNERKFKCEVCGKAYATQNSKRKHMKKNHGDTKGKKSKKITKTALRKARSAAMGRVRAHKKNLINILMFSNANPIRDKDMLQGIQCHYCKTKMIESKDLKEHFVKEHRSEEFMASKMKEFICKKIFSSKSRVNQHVKMVHFNKKRYKCNYCEERFQEFNMKLRHMKNVHDVNLELPCQICNKIFVTPSSLRMHIRAYHLCEKRFLCSECGKRFFTQTLLVNHRKIHSGFDSFTCEICLAEFLSKVRLREHIKSHTRAKSSAQSCLFCSKEFSTEASLKMHIENVHSNLFDVEEDKTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -