Tluc017789.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- Hivep1
- Assembly
- GCA_948473455.1
- Location
- OX419584.1:14793592-14804595[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0012 0.085 13.9 2.9 2 23 99 121 98 121 0.94 2 13 0.00045 0.032 15.2 0.1 1 23 127 149 127 149 0.97 3 13 0.019 1.4 10.1 0.1 1 23 158 181 158 181 0.89 4 13 2.5e-05 0.0018 19.2 2.8 1 23 186 208 186 208 0.98 5 13 0.00025 0.018 16.0 2.3 1 23 214 236 214 236 0.97 6 13 9.9e-05 0.0071 17.3 4.9 1 23 242 264 242 264 0.98 7 13 3.8e-07 2.7e-05 24.9 2.2 1 23 270 292 270 292 0.97 8 13 6.5e-06 0.00047 21.0 2.6 1 23 298 320 298 320 0.99 9 13 0.00017 0.012 16.5 0.7 1 22 326 347 326 347 0.96 10 13 2.1e-05 0.0015 19.4 0.1 1 23 354 376 354 376 0.96 11 13 3.5e-05 0.0025 18.7 6.5 1 22 382 403 382 406 0.91 12 13 1.4 99 4.2 0.6 10 23 505 518 503 518 0.87 13 13 3.5e-05 0.0025 18.7 6.5 1 22 524 545 524 548 0.91
Sequence Information
- Coding Sequence
- ATGGCAGGGTCGCCATATACGGAGAACGAACAAGCCGACGTGGATGTGGAAGAGATTCAAGAGGCAGACCCTCTAGCAGTTCCCGAGCGGGAGGAGTCGGCGAGCGACCCAGACAAGTCCCTCCCCCTTTCAGACCAGGACTCCGCGCACAAACCACACACTCCTGAAGCTACTGCTACCAGCAACACGATAGCCACTGCGTTTAATACTGTTTGTTCAATTACAGAAACCCCAGAGACTGAGGATAAGGAACCCGAAGTGGTAGAATTAGGACCCAAAGGAAAACCCAAACTAAAGTGCAGCCATTGCGACAAAACGTTCAACAGCAAACAAAGCCGGTCTATGCATATCAAGGCGGTGCACCTGTGTGAGAAGCCGTACGTGTGTTCGGAGTGCGGCTGCGCGTTCGCCTACCCGCGCTCGCTCGCGCTGCACGCCATCTCGCACCGCCGCCACCGCGCCGCGCGCCGCTACGCATGCGACCTCTGCGGGAAGGTGTTAAACCACCCGTCATCCGTGGTATACCACAAAGAAGCGGAACACGCGAACCAACGCTACGTGTGCAACAAGTGCGGCAAGTGGTTCAAACACAAACAACTGCTGCAGAGGCACCAACTGGTACACAGCCAGCTCAGACCTTACTGTTGCAAGGCCTGCAACGCGTCGTTCAAGACGAAGGCAAATCTACTGAACCATCAGCTGCTGCACTCGGGCGTGAAGAAATTCAGCTGCGACATCTGCAAACACAAGTTCGCGCACAAGACCAGCCTCACACTGCACATGCGCTGGCACACCGggtcgAAGCCATTCTGTTGTAAGATTTGCGGCAAGAGCTTCAGTCAGAAGGGGAACCTCTCTGAGCACGAGCGCATACACAGCGGCGAGAAACCATACCAGTGCACGCTCTGCCCCAGGAAGTTCACCACCTCCTCGCAATACAGGATGCACGCGCGCAGACACCAGCCGGACCGGCCCTACGCTTGCTCGCACTGCCCCAAGAGGTTCGCGTCGCGCACGTCGTGGTCTGCGCACCAGCGGCGCGAGGCGGGGGTGCGCGCGCACGCGTGCGGGGTGTGCGGGCGGGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTGCCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGGTACTGTGCCATGGCTCATGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTGCCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGGTACTGTGCCATGGCTCATGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTGCCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGGTACTGTGCCATGGCTCATGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTGCCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGGTACTGTGCCATGGCTCATGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTGCCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGGTACTGTGCCATGGCTCATGCCTTCGCCGAGCGCTGGGCGCTGCTCAAGCACATGCGGAGCCACACCGGCGAGAGACCCTTCCGCTGCCCGCACTACCCCCGGACCTTCGCCGACTGCTCCAACCTCAACAAACACAAGAAGAGTCTTCCGCTCCCCCGCAAGTCCGGTGAAGCTTGATTGGTCGTACCTTTTCGACACAATCATAGGTCAATTCAAACAAAAAAAAAGTTTACATTATATTATTTATCCGCAGCAAGTGCACAAACAGATAAGCCTGTTGGTGAACAACGACGGCAACGCACCGGAGCAGCAGATCGTGGTGCAGCGGGAGGAGCTGCGGGGCGCGGGGGCGGGGGGAGCGGGGGAGGCGGGGGACGGCGTCATATACGTCACGTACGATGTGGACGACGACCAGTCCGGGTACACCATTATGGACACGGAACAGGCTAGCGGGCTCCTGGGCGGTGTATTAGTGTCGGGCGGCGCTCTGCAGACACTCAGCCCCGTGCTCATCGACACTGAGGAGGAACTGTCGCTCAACGACACCGACACCATCTCCGTACGTATACTGAGAGACCCCCCCCCACACTAG
- Protein Sequence
- MAGSPYTENEQADVDVEEIQEADPLAVPEREESASDPDKSLPLSDQDSAHKPHTPEATATSNTIATAFNTVCSITETPETEDKEPEVVELGPKGKPKLKCSHCDKTFNSKQSRSMHIKAVHLCEKPYVCSECGCAFAYPRSLALHAISHRRHRAARRYACDLCGKVLNHPSSVVYHKEAEHANQRYVCNKCGKWFKHKQLLQRHQLVHSQLRPYCCKACNASFKTKANLLNHQLLHSGVKKFSCDICKHKFAHKTSLTLHMRWHTGSKPFCCKICGKSFSQKGNLSEHERIHSGEKPYQCTLCPRKFTTSSQYRMHARRHQPDRPYACSHCPKRFASRTSWSAHQRREAGVRAHACGVCGRAFAERWALLKHMRSHTGERPFRCPHCPRTFADCSNLNKHKKVLCHGSCLRRALGAAQAHAEPHRRETLPLPALPPDLRRLLQPQQTQEGTVPWLMPSPSAGRCSSTCGATPARDPSAARTAPGPSPTAPTSTNTRRYCAMAHAFAERWALLKHMRSHTGERPFRCPHCPRTFADCSNLNKHKKVLCHGSCLRRALGAAQAHAEPHRRETLPLPALPPDLRRLLQPQQTQEGTVPWLMPSPSAGRCSSTCGATPARDPSAARTTPGPSPTAPTSTNTRRVFRSPASPVKLDWSYLFDTIIGQFKQKKSLHYIIYPQQVHKQISLLVNNDGNAPEQQIVVQREELRGAGAGGAGEAGDGVIYVTYDVDDDQSGYTIMDTEQASGLLGGVLVSGGALQTLSPVLIDTEEELSLNDTDTISVRILRDPPPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -