Basic Information

Insect: Teleiodes luculella
Gene Symbol: -
Assembly: GCA_948473455.1
Location: OX419596.1:247153-252355[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7.2e-05 0.0052 17.7 1.0 2 22 161 181 160 181 0.94

2 12 0.0014 0.1 13.6 7.8 1 23 188 210 188 210 0.98

3 12 6.8e-05 0.0048 17.8 1.3 2 23 225 246 224 246 0.98

4 12 0.0029 0.21 12.6 2.7 3 20 255 272 253 275 0.92

5 12 2.9e-06 0.00021 22.1 0.8 1 23 281 303 281 303 0.99

6 12 2.1e-06 0.00015 22.5 1.2 1 23 309 331 309 331 0.97

7 12 1.6e-06 0.00011 22.9 2.1 1 23 337 359 337 359 0.95

8 12 6.9e-06 0.0005 20.9 0.3 1 23 365 387 365 387 0.96

9 12 1.5e-05 0.001 19.9 2.8 3 23 395 415 395 415 0.99

10 12 0.00011 0.0077 17.2 7.5 1 23 421 443 421 443 0.98

11 12 9.3e-07 6.7e-05 23.7 1.0 1 23 449 471 449 471 0.98

12 12 0.00033 0.024 15.6 0.1 1 23 477 499 477 499 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7.2e-05	0.0052	17.7	1.0	2	22	161	181	160	181	0.94
2	12	0.0014	0.1	13.6	7.8	1	23	188	210	188	210	0.98
3	12	6.8e-05	0.0048	17.8	1.3	2	23	225	246	224	246	0.98
4	12	0.0029	0.21	12.6	2.7	3	20	255	272	253	275	0.92
5	12	2.9e-06	0.00021	22.1	0.8	1	23	281	303	281	303	0.99
6	12	2.1e-06	0.00015	22.5	1.2	1	23	309	331	309	331	0.97
7	12	1.6e-06	0.00011	22.9	2.1	1	23	337	359	337	359	0.95
8	12	6.9e-06	0.0005	20.9	0.3	1	23	365	387	365	387	0.96
9	12	1.5e-05	0.001	19.9	2.8	3	23	395	415	395	415	0.99
10	12	0.00011	0.0077	17.2	7.5	1	23	421	443	421	443	0.98
11	12	9.3e-07	6.7e-05	23.7	1.0	1	23	449	471	449	471	0.98
12	12	0.00033	0.024	15.6	0.1	1	23	477	499	477	499	0.96

Sequence Information

Coding Sequence: ATGGAAGAGCAGAGTTTGTCATCTTGCTGCCGAACCTGCCTGATCAGCGGCTCTAGCATGATGCACGAGATATCAGAGCCGCTGGACAGTGCGTCCACCGTAGCCGAGGCGCTCAACCTGTGCACGTCTCTCAAAGTGGTAATAGGTGATGGCCTCCCTAAGAACCTATGTGACAGTTGCTATAACTGCTTGACGAGCTTCTATCACTTCCGAAAAGTTGCAGAAACTGTTGATATTCAACTTAGAAATCAGGTTGAAAATAAAAATATAATACAATGTTTGAATAATAATGAATTCAAAGAAATTAAAGTTGAGGAGGCAATTTCTAACACCAAAGAAGAGGTAAACTGTGGGATCCTAAATGACATGGGGGTCGATATCAAACAAGAATTTAATTTCATTGATGAGAGTGATGATGGATTTGACAATGATTTCACATTTGACGAAAATAATGATACTGAAGACATTAAAGTTAATTTAAAATGTGAAAATTGTTATAGAAAGTTTACAAGTTTAGATAATTTAGAAAAACATCTTAAAAGGAACAGTTGTGATAGCACTTTTACATGTAAGATTTGCTCTAGGACTTTCAAACGACACCATAAATATGTTAAACATTTAGTAACACACGGACAAGACATAGCTGAAAATGAAATCAAGCACAATGAGCAGAAATGTTCAGTCTGTTCTGTAAAGTTCAAATCTGTAAACTCGTTAACAGCTCACATGCGGAAACATACCAAAAAAGGTAGAATTTTAGCTTGCTCCATCTGTGGAAAAGAGTTTAAGAAAGTCAGTCATGTGAAAAGGCATGAGTTGTGTCATGAAGTGAACCGCCCATTTAAATGTCCAACATGTCCAAAAAGGTTTAACACAGAAAGTGTTTTAAGTGAGCACATGAACAAACACAACAAAGTGAAGCCCCATGTTTGTCCCATGTGTGATAAACCATTTGCTCACCTCTCCACGCTGTCCACACATATCAAAGTGCATACCCGGGACAAGCCATTTCTGTGTTCCACTTGTGGGAAGAAGTTTGATTCCAGCACCAATTTGAACCAGCACTTGAGGAGGCATGCTGGCCTCAAAATGTTTGCATGTACTATGTGTCCAAAGAGTTTTGTAAGTAAAGGGGAATTACAGTCGCACAGCATCACGCACACGGGCACGCGGTCGTGGGGCTGCGACCAGTGCGGAGCGGCCTTTACACACAGGAAGTCGCTGAACCAACACATGCGGAAACACTCCGGCATCAAGCCCCATCAGTGCGACACCTGCCCCATGAGGTTCTTCAAGAAGGACCACCTGAAGCGTCACTACCGCACGCACACCGGCGAGAAGCCCTACAAGTGCCAGTACTGCGAGCGCGCCTTCACGCAGAGCGGGGACCTGCTCAAGCACCGCCGCGCTCACCTGGGGGACCAGCTCTACAAATGCGCGGAGTGTCCTGCGGAGTTCCGGCTGAGGGCGGAGTTGCGGCGGCACCTTTCTGACCACTACGTGACGTCACGCCGAGCGCCACGTGACGTCACCGAGCCCCCAGCAGCGGTCACAAGTACAACAACCACCGAGCTTACCATAACTAACTAA
Protein Sequence: MEEQSLSSCCRTCLISGSSMMHEISEPLDSASTVAEALNLCTSLKVVIGDGLPKNLCDSCYNCLTSFYHFRKVAETVDIQLRNQVENKNIIQCLNNNEFKEIKVEEAISNTKEEVNCGILNDMGVDIKQEFNFIDESDDGFDNDFTFDENNDTEDIKVNLKCENCYRKFTSLDNLEKHLKRNSCDSTFTCKICSRTFKRHHKYVKHLVTHGQDIAENEIKHNEQKCSVCSVKFKSVNSLTAHMRKHTKKGRILACSICGKEFKKVSHVKRHELCHEVNRPFKCPTCPKRFNTESVLSEHMNKHNKVKPHVCPMCDKPFAHLSTLSTHIKVHTRDKPFLCSTCGKKFDSSTNLNQHLRRHAGLKMFACTMCPKSFVSKGELQSHSITHTGTRSWGCDQCGAAFTHRKSLNQHMRKHSGIKPHQCDTCPMRFFKKDHLKRHYRTHTGEKPYKCQYCERAFTQSGDLLKHRRAHLGDQLYKCAECPAEFRLRAELRRHLSDHYVTSRRAPRDVTEPPAAVTSTTTTELTITN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -