Tluc009564.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- ZFX
- Assembly
- GCA_948473455.1
- Location
- OX419602.1:399740-408233[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.1 6.5e+02 1.7 0.2 1 23 175 200 175 200 0.82 2 20 0.054 3.9 8.7 4.3 1 23 252 274 252 274 0.97 3 20 0.077 5.5 8.2 0.2 6 23 287 305 287 305 0.95 4 20 0.2 15 6.8 0.1 3 23 315 336 314 336 0.95 5 20 0.00056 0.04 14.9 0.6 2 23 359 380 358 380 0.96 6 20 2.2e-05 0.0016 19.3 1.5 1 23 386 409 386 409 0.97 7 20 7.4 5.3e+02 1.9 1.4 1 11 415 425 415 433 0.80 8 20 0.039 2.8 9.1 3.3 1 23 570 592 570 592 0.96 9 20 0.0005 0.036 15.1 2.0 2 23 599 621 598 621 0.92 10 20 6.6e-06 0.00047 21.0 3.3 1 23 627 649 627 649 0.98 11 20 2.4e-06 0.00017 22.4 3.5 1 23 655 677 655 677 0.98 12 20 0.00015 0.011 16.7 1.7 1 23 683 705 683 705 0.98 13 20 0.00028 0.02 15.8 2.4 1 23 711 733 711 733 0.96 14 20 0.00031 0.022 15.7 1.2 1 23 739 762 739 762 0.97 15 20 0.94 68 4.8 1.0 2 23 824 844 823 844 0.95 16 20 5.4e-05 0.0038 18.1 1.5 1 23 850 873 850 873 0.95 17 20 4e-06 0.00029 21.7 6.0 1 23 879 901 879 901 0.96 18 20 4.6e-05 0.0033 18.3 0.2 1 23 907 929 907 929 0.99 19 20 0.00049 0.035 15.1 0.2 1 23 935 957 935 957 0.97 20 20 0.0036 0.26 12.4 1.0 5 23 966 984 964 984 0.96
Sequence Information
- Coding Sequence
- ATGAATAACGAGACTGAGCAGATCTTCTTATTGAATCCTTGTGATCTCCAGCCCCCCTCTGTACCGCAGAAACCGACTGAAACCCCAGCGGGGCAGGTCAACCTCGAGAACATAGAAGACTTCTCAACAGTATGCCGGATGTGTGCCACCATCACCGAGTTCTTGATCCCGATATTCTCCGGCGAGGGGCTGCAGAACAACTTAGCTGACAAGATTCACAAACATCTACCTATTAAAGTGAGTGAAGCGGACGCCCTCCCGCGCGCGGTGTGCTACCAGTGCGCGCACACTCTGCTGGCGTGGCACGAGCTGCACGCGTGCTGCCGCCAGGCTGACCTCGCGCTGCAGACCAGGCTCGCCCAGCTGCAGCAGAATGCGCTCATGCCACAGGATTCAAAGCCAACCTTAAACGAAGAAAGCCAAGTGATAGAAAACAACGCACAGAATGAGTTAAAATATTCAATAATTAAAGAAATATTGGTTGATACCTTAACTGCTGATGACAACCAAACCAATCGGACATATGTCTGTCAAAGATGCCCTGAAGAACACTCTTCAGAAAGTATAAATGCACTGAACAACCACATACAATCTGCACATTCACCAGAAGCACAAACCACAGAACATCTTAAAGAATTCGTAAGAGAATACATAATGATTGAAGAACCATTAATATGGGATGACTCAGATAATGACATACAATTTGATAAGGAATCTACTTCTGAAGAACCTTCTAAAGCTATAATTAATAACTTCTGCTGTCCATTTTGCGTCAGCGTATTTTCTTCTAGCTCTCGTCTACTTCACCATCTCAATCAACATCCAGAAATAACAATTGAGGATAATAAATTTACATGTTGTGATAAAACATTCGTCAATAAAATGTTCTACATAAAGCATTTGCAAGAAGCCCACATGAAAACAGATGTACTATTAAATATATGCAAATCTTGCGGTTATAATGGAGATTCCGTTGAAGAACTTCAGAAGCACATTGCTTCTACACATAGTGATTACAGCACATTAAAAGAAAAAACCAAAAAGAGTAAAAAGAACCAGAAATACATCCCTGTGCCTTGTCCAAAATGCAAACAAATGTTCTCAAACAAATACCGCATGCAGATTCATTTAAAGGGACATTACGAAAAAGAACGATACCATTGTGACAAATGTGACAAAAATTACAGCACATTGGGAAATCTTACAGCCCATAAGAAAATAGCCCACGATGGGATTTTGAAGTTCCACTGCACGCATTGTGGTGAAGCGTTGAAGCCCTGCCGAAATACCACCCATAATGACCAACTCCGGTATAAATACGAAATAGAAATTGAAGACAAGGACACAGATGATGATCCAGAAGTAACTCTTGATTCTAGCAATGCTGTATCCGACGATGAACCTCTTTCCACATTAGCTACGACGAAAAAAATGGAACTGTATAACAACTTTTACAAAGCATTAGTAAATTTTAGAAATCATTTTGTTAATGATCACAAGGAAAAAGATCCTTACCCAGATATGACAGATTCAAGTGACTCTGAAATGATGACCGAAGACACGTTTAACGTAAAAGACGAGATAGATCAGGACGATGTTAACAATTACGACGATCTAACACAAAACAATATGAGAAAAGACAGGATGGATGAGGAAACTCGTATAGAATTGAGTGAGGTACAAACAAAAATCAATGGAAAAGTTTATTACACCTGCAAAATATGCGGAAAGAACTTGAGTTCATCGCATACGTATGTGTTTCACAAAAGGATTCACACCGGGGAGCGCCCTTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGTGCCCCGAACGGCCTTCAGCGGCATCTGACGGAGACGCACGAGAAAGTCCGCAGGCACACCTGCCGGTTCTGCCCCAAGAACTTCGCCAACTCGCAGAACTTGAAGCAGCACATGAGGATACACACGGGCGAGCGGCCCTTCGTCTGCGCGCATTGCGGGAAGAGGTTCACGCAGAGCGGCTCGCTACACGTCCACCTCAAGACACACAGCGAACAGTTCCCGCACCAGTGCGCCGAGTGCGGAGCCAAGTTCAGACTGAGGTCCGGACTGACGAGGCACAGGCTCAAACACACCGGGGAAAGGCCCCACGTCTGCGTTGTCTGTGGCAAAGGCTTTCGTCAGAAACATGAGTTGAGCAGCCACAGTCTGTCCCACACTGACTCCAAGCCGTACACCTGCGCGTTGTGCGGAGCCGCGTTCCGGCAGAGGCGCGCGCTCACGCATCACTCCAAAAGACTGCACGAAACTGACCAGAGCAGAGACCCATCGCAACATACCGTGCGAGGACCTGACATGGTGGTCTACACTCAAATAGGACAAAAATATACAGTAATCGTTGAAGTTAAAATCGAAGAATCAAACACCGTCAATGAAACAAAAGAATCACCTAAAATAATTTTGGCAGAAGATGGAAAGAAATATGTCGAATGTAAATTTTGTAAGAAAAACATTACGTTTGCTTCGTGGAGGAGACATGTAAGATCGCACCGAGGAGACAAACGGCACAGCTGCCACACTTGCGGCTTGAGCTTCACCGACGGCGGAAACTTAGCTCGGCACACGCGGGCCCTGCACTCCAAACAACGACCTCACGCCTGCCCCATCTGCCGGAAATGTTTCTCCAGAAAAAGTCACCTCGAAGACCACGTCAGGTCGCACTCAGAAAGCAGAGAATACGTCTGCGATTTGTGCGGTAAAGGATCAAAATCGAGTGCAGCATTGAGGATGCATCGGAAGACGCACGATAGCGACATGAAGTTTGAATGCATGGAGTGTGATTCCAAGTTTAAGAGGAGAGGGGAGCTGCTGGCCCACGTGAGCGTACACACCGGGGAGAAGGCGCATGCGTGCCAGTGTGGACGCGCCTTTAGGCTGCGCAGCCAGCTCACACTACATTCCAGGACACATACAGCTTCAGGAGAAGGCCGGCAGGTGGCTTCGTGA
- Protein Sequence
- MNNETEQIFLLNPCDLQPPSVPQKPTETPAGQVNLENIEDFSTVCRMCATITEFLIPIFSGEGLQNNLADKIHKHLPIKVSEADALPRAVCYQCAHTLLAWHELHACCRQADLALQTRLAQLQQNALMPQDSKPTLNEESQVIENNAQNELKYSIIKEILVDTLTADDNQTNRTYVCQRCPEEHSSESINALNNHIQSAHSPEAQTTEHLKEFVREYIMIEEPLIWDDSDNDIQFDKESTSEEPSKAIINNFCCPFCVSVFSSSSRLLHHLNQHPEITIEDNKFTCCDKTFVNKMFYIKHLQEAHMKTDVLLNICKSCGYNGDSVEELQKHIASTHSDYSTLKEKTKKSKKNQKYIPVPCPKCKQMFSNKYRMQIHLKGHYEKERYHCDKCDKNYSTLGNLTAHKKIAHDGILKFHCTHCGEALKPCRNTTHNDQLRYKYEIEIEDKDTDDDPEVTLDSSNAVSDDEPLSTLATTKKMELYNNFYKALVNFRNHFVNDHKEKDPYPDMTDSSDSEMMTEDTFNVKDEIDQDDVNNYDDLTQNNMRKDRMDEETRIELSEVQTKINGKVYYTCKICGKNLSSSHTYVFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHEKVRRHTCRFCPKNFANSQNLKQHMRIHTGERPFVCAHCGKRFTQSGSLHVHLKTHSEQFPHQCAECGAKFRLRSGLTRHRLKHTGERPHVCVVCGKGFRQKHELSSHSLSHTDSKPYTCALCGAAFRQRRALTHHSKRLHETDQSRDPSQHTVRGPDMVVYTQIGQKYTVIVEVKIEESNTVNETKESPKIILAEDGKKYVECKFCKKNITFASWRRHVRSHRGDKRHSCHTCGLSFTDGGNLARHTRALHSKQRPHACPICRKCFSRKSHLEDHVRSHSESREYVCDLCGKGSKSSAALRMHRKTHDSDMKFECMECDSKFKRRGELLAHVSVHTGEKAHACQCGRAFRLRSQLTLHSRTHTASGEGRQVAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -