Tluc019025.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419611.1:1179344-1183735[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.14 10 7.3 1.5 1 23 26 47 26 47 0.97 2 29 0.47 34 5.7 1.3 3 23 69 90 67 90 0.92 3 29 0.55 39 5.5 0.6 6 23 114 132 112 132 0.92 4 29 0.00016 0.011 16.6 2.7 1 23 137 160 137 160 0.95 5 29 0.0016 0.12 13.4 0.3 2 21 172 191 171 192 0.92 6 29 0.0067 0.48 11.5 6.0 1 23 240 263 240 263 0.97 7 29 0.22 16 6.8 0.6 2 23 291 312 290 313 0.93 8 29 6.5 4.7e+02 2.1 1.3 3 23 337 359 336 359 0.87 9 29 0.0024 0.17 12.9 0.9 3 23 366 386 364 387 0.94 10 29 0.002 0.15 13.2 1.8 2 23 393 415 392 415 0.95 11 29 0.0031 0.22 12.6 0.5 1 23 420 443 420 443 0.93 12 29 0.00016 0.011 16.6 3.3 1 23 447 470 447 470 0.96 13 29 0.0029 0.21 12.7 0.4 2 23 477 498 477 498 0.96 14 29 0.00059 0.043 14.8 1.3 1 23 537 559 537 559 0.98 15 29 0.024 1.7 9.8 0.1 2 23 587 609 586 609 0.96 16 29 0.032 2.3 9.4 0.8 2 23 630 652 629 652 0.93 17 29 4.1e-05 0.0029 18.5 0.5 1 23 657 680 657 680 0.97 18 29 0.025 1.8 9.7 2.1 1 23 684 707 684 707 0.88 19 29 0.05 3.6 8.8 1.2 2 23 710 732 709 732 0.95 20 29 0.25 18 6.6 0.3 2 20 738 756 737 758 0.92 21 29 0.0061 0.44 11.6 1.7 1 23 810 833 810 833 0.91 22 29 2.2 1.6e+02 3.6 0.0 2 23 861 883 860 883 0.95 23 29 0.00014 0.01 16.8 1.1 1 23 905 928 905 928 0.93 24 29 0.00037 0.027 15.5 2.4 3 23 935 955 934 956 0.91 25 29 0.0065 0.46 11.6 0.3 1 23 961 984 961 984 0.91 26 29 0.00092 0.066 14.2 0.6 2 23 990 1012 990 1012 0.95 27 29 0.0049 0.35 12.0 6.7 1 23 1016 1039 1016 1039 0.97 28 29 0.11 8 7.7 0.9 2 23 1046 1067 1045 1067 0.96 29 29 0.062 4.5 8.5 1.9 1 23 1073 1095 1073 1095 0.96
Sequence Information
- Coding Sequence
- ATGCGCAGACGACGGAAAAACCTGCGAACGGTATTTGAAAATAGCAGCGTTTACCCTTTCGAATGGCAGGACGAATTTATATGCTTTTACTGCGGTATGCCTTGTCCTCTGGAGGAATTAAGAAAGCATACTAAATCACACAGCTCTCACCAAATCTCGCCGAAATATTCGCTGGATGTCAAAGTGGACGTGTCTGTCACATGTTGCGAATTGTGCGACCGCCACTTCGAAAATATCAACGAAATTATCGAACATCTAATAGTGAAGCATCGCCTCAAATACGACAAGCGTGTGACTATTGATTGGGATCAATTCAGGTTGTCAGATTTGTCATGTCTTTGTGAGGAGAAATTCTACAGTTTTGTCGAATTGCAACGTCATTACAACGAGAAACACCCTAAAATACTCTTCAGTTGTCACAAGTGCTTAGAGAATTTTACTACGAAAGACAACCTAGATGCGCATATGAAAGATAAACACGACTGTTTTGATAAGGGTGACATGAAATGCCTCGTATGCCCGAGTTGTCAAAAGGTGTTTACATCTAAAAAGGGTTACAAGTTGCATATTACTAAGATTTGCGTCAAAGTTGAGCCTAAGACGGAGATCGTCACAGATATGCCTGAAAGACGACCAAACTTAAAGCTTCTCCGAGAAAGTATTGCTGGCTTCCTAAATTCGAGTAACGCAATGCCTTTTAAATTTTTCATGCAGAAATTCCGATGTTTCTACTGTTCTAAAGATTTTATTGATTGCGACGAATTAAGACATCACACGTTTACTGAACATAACCATTGCGATCCGAAGAGCAGACTAATGAAGTTAATCAAAGGCCGCAGTATAACTATAAAAGTTGATATAACAGGGTTGTGTTGTAAAGTTTGTGGTCAAAACGCTGATGGTGTAGACGATTTGGTTAGACATATGGTTTCACATCACAGAGCAGAGTATAGCGAAACTCTAACAGATGTTTTGCAATCCTACAAACTATCTAAAGATAGTATGCACTGTCTCATTTGCCCTAACGTCAATTTTAGATATTTCTCAAAACTCCTAGAACACATGAACGAATTCCATTCGAGGAATAAAATAATATGCTCCTATTGCGGAATGGTCTTCGGTAAAGACCCTAACTACAGATCTCATTTGAAACGCCATCACAATCCCAATTCTTTAAAATGCAACGACTGCCATTTAGAATTTGATAATTTGTCGAAACTGTCGAATCATCGCGCAAAATTGCACGGAGAAAAATCTTATAAGTGTCCGGAGTGCTTGGAGACTTTTGGCACCCAGTACAAACGCCAGAAGCACTTGATAGACGCTCACGGATCAGGGCATCCTTGCACTTACTGCGGGAAACTATTCACCAGGAATTCCTTTATGAAAGATCATGTGAGAAGGTCCCATTTGAAAGAGAAAAATGCCGAATGCTCAGTTTGCAAGGAGAAGTTCTTCGACAATATTTTGTTGAGGATACACATGGTGAAACACGTCGGCGAAAGGAATTTTCATTATAAAACGTCGAGCGCGAACAGAGAGAGAAGGCGAAACCTACAAATATTGTTCAACAACACGACAGTCTTACCGTTCAAATGGCGATCGAGATACATGTGCTTTTACTGTGGCGAGGACGTGTCAACTCACGACGACTTGCGAACGCACACGGAAACGCACGAGCCGTGCTCCGAAAGAGACAGAGCTATTAGACTAGTTAAATCAAGCGACGCCGAAGTCAAAATCGATGTTTCCGACATTCGCTGCAAAATTTGTAACGAGGAATTTCCTGATCTTTTGGAAATCGTCTCGCATTTGCGTATGAAACACAATCTTGATTACAATAATGATGTAGATCTGTCTATAGTTCCTTATAGGCTAGTCGATTTGAAGTGTATTTACTGTGATAAGAGTTTTGACTTTTTTGGCAAATTAATTTCTCATACAAATAGTTTGCATCCAACTGATTGTTTCGTATGTGACGATTGCGGTCAAAAGTTCAACAAGCAAAGAGATTTGGGGTCTCACATTCGATTGTATCACAAAAACGAGTATAAATGCTCGAAATGTTCGCAGAGTTTCGTGTCCAGTGCGGCGTTACAATGCCACAAAATAAACGAACACATTTCGACGTGCAATGTATGTTTACAAACGTTTTCGTCGACGGCTAAAAGACTGAAACACATGAAACAGGCGCACGATTTGGACAATCTACAATGCGGTCTTTGTAAAAGGGTTTTGAGTACTAAACAAGCGTTCTTCACACACGCATCTAGATGCACCAGAAATATGTCCAAGGAAAGAGGCATAGAGTACAATAAAACCGAAGTGAACGACGAAAAGCGACCGTGTGTCAAAAAAATACGCAACAATATAGCTTGCATTCTCAATATGTCCACGGCGATTCTTTTTAAGTATTACATGAACAAATTCAGATGTTTCTACTGTCCGAAAGATTTTGTTGAGTGCGAAGACTTGAGACAGCACACTGTATTGGAGCATCCCATGTGCGATACAAGATTCAAATCGATGCAGTTACGCCATAGAAAAGAAGATGGCGTCAAAGTTGACACGTCATCTCTATCTTGCAAACTGTGTTTTGAACAAGTACCAGATTTAGAAGTGCTTATAAACCATTTGATAACTGAACACAAAGCGAAATACGATAGATCCGTACCAAATATCCTACAACCGTATAGACTGATTAAAGACAACTATTGCTGTCCGGATTGCGGTCAAAGTTTCAGATATTTCGGTATGTTACTAAGGCACGTTGGTAAGGAACACACGGGCAACAAAAAGGTCTGTATTTATTGCGGTAAATGCTTTAGAACTGACCCAAATTTGCGTGCTCACATATCAAGGCATCACACGATGGCTAAACACCGTTGCGACCAATGCGACGCCGAATTCTCCGCTTCGAACGATCTGCAGTTGCATATGGGAGCAAAACATGGCGTCAAAGTTGCTCAATGTACCGAATGCAACGAGAAATTCATATCCCAATACCGCGTTCAAAGACACATGATCAATGTTCACGGTATGGGCCATAAATGTTCGTATTGCGGAAAACTTTTTACCAAACACTCCTTCATGACCAGTCACGTCAGAAGACTCCATCTTAAAGAGAAGAACGTTGAATGCTCGGTGTGTTTCGAGAAGTTCTTCGACACGCAACGCTTGAAAATGCACATGGTTAAACATGTGGGCGAGAGGAACTTCCATTGCGATTTGTGCGGGAAAAAGTTCTTGTGGAAGAAGAATTTGAGAGGGCATATGGCGTCTCATAATAAACATGGCAATGTGTTGCCAACTTAA
- Protein Sequence
- MRRRRKNLRTVFENSSVYPFEWQDEFICFYCGMPCPLEELRKHTKSHSSHQISPKYSLDVKVDVSVTCCELCDRHFENINEIIEHLIVKHRLKYDKRVTIDWDQFRLSDLSCLCEEKFYSFVELQRHYNEKHPKILFSCHKCLENFTTKDNLDAHMKDKHDCFDKGDMKCLVCPSCQKVFTSKKGYKLHITKICVKVEPKTEIVTDMPERRPNLKLLRESIAGFLNSSNAMPFKFFMQKFRCFYCSKDFIDCDELRHHTFTEHNHCDPKSRLMKLIKGRSITIKVDITGLCCKVCGQNADGVDDLVRHMVSHHRAEYSETLTDVLQSYKLSKDSMHCLICPNVNFRYFSKLLEHMNEFHSRNKIICSYCGMVFGKDPNYRSHLKRHHNPNSLKCNDCHLEFDNLSKLSNHRAKLHGEKSYKCPECLETFGTQYKRQKHLIDAHGSGHPCTYCGKLFTRNSFMKDHVRRSHLKEKNAECSVCKEKFFDNILLRIHMVKHVGERNFHYKTSSANRERRRNLQILFNNTTVLPFKWRSRYMCFYCGEDVSTHDDLRTHTETHEPCSERDRAIRLVKSSDAEVKIDVSDIRCKICNEEFPDLLEIVSHLRMKHNLDYNNDVDLSIVPYRLVDLKCIYCDKSFDFFGKLISHTNSLHPTDCFVCDDCGQKFNKQRDLGSHIRLYHKNEYKCSKCSQSFVSSAALQCHKINEHISTCNVCLQTFSSTAKRLKHMKQAHDLDNLQCGLCKRVLSTKQAFFTHASRCTRNMSKERGIEYNKTEVNDEKRPCVKKIRNNIACILNMSTAILFKYYMNKFRCFYCPKDFVECEDLRQHTVLEHPMCDTRFKSMQLRHRKEDGVKVDTSSLSCKLCFEQVPDLEVLINHLITEHKAKYDRSVPNILQPYRLIKDNYCCPDCGQSFRYFGMLLRHVGKEHTGNKKVCIYCGKCFRTDPNLRAHISRHHTMAKHRCDQCDAEFSASNDLQLHMGAKHGVKVAQCTECNEKFISQYRVQRHMINVHGMGHKCSYCGKLFTKHSFMTSHVRRLHLKEKNVECSVCFEKFFDTQRLKMHMVKHVGERNFHCDLCGKKFLWKKNLRGHMASHNKHGNVLPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -