Tluc000685.2
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419586.1:11290837-11300440[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0065 0.47 11.6 1.1 3 23 737 758 736 758 0.96 2 24 4.9 3.5e+02 2.5 1.1 4 23 1107 1128 1105 1128 0.84 3 24 0.24 17 6.6 0.3 1 22 1133 1154 1133 1154 0.95 4 24 7.8 5.6e+02 1.9 0.3 1 22 1194 1215 1194 1217 0.82 5 24 0.037 2.6 9.2 0.8 2 21 1227 1246 1226 1247 0.95 6 24 1.4 1e+02 4.2 0.0 3 23 1256 1277 1254 1277 0.89 7 24 0.011 0.8 10.8 1.7 2 23 1296 1318 1295 1318 0.97 8 24 0.0013 0.093 13.8 2.7 1 23 1324 1347 1324 1347 0.95 9 24 0.15 10 7.3 0.0 1 23 1371 1394 1371 1394 0.90 10 24 0.0046 0.33 12.0 1.8 1 23 1399 1421 1399 1421 0.97 11 24 0.012 0.87 10.7 0.3 1 23 1427 1450 1427 1450 0.95 12 24 0.0027 0.19 12.8 1.3 1 23 1463 1485 1463 1485 0.97 13 24 0.00021 0.015 16.3 1.8 1 23 1535 1558 1535 1558 0.97 14 24 1.6e-05 0.0011 19.8 2.3 1 23 1617 1640 1617 1640 0.98 15 24 0.0014 0.1 13.7 2.0 3 23 1664 1685 1662 1685 0.95 16 24 0.047 3.4 8.8 0.1 2 23 1691 1713 1690 1713 0.94 17 24 0.012 0.83 10.8 0.2 1 21 1756 1776 1756 1777 0.95 18 24 0.0014 0.1 13.6 0.6 1 23 1787 1809 1787 1809 0.93 19 24 0.00013 0.0091 16.9 0.4 2 23 1898 1920 1897 1920 0.93 20 24 3.9e-07 2.8e-05 24.9 1.4 3 23 1927 1947 1926 1947 0.98 21 24 0.0035 0.25 12.4 0.2 1 23 1965 1987 1965 1988 0.95 22 24 0.21 15 6.8 0.0 1 23 2010 2032 2010 2032 0.97 23 24 0.024 1.7 9.8 0.5 1 23 2038 2061 2038 2061 0.95 24 24 0.0003 0.021 15.8 0.4 1 23 2070 2093 2070 2093 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCATCGCGAATCAAGGATTGTGTGTCCATTCAAATAACAGAAAATGACGATCTGCCGTCGAAAGTCTGCAGGAAATGTGTGGACAATGTTCACAACTGGCACATATTTAAGAGAGTTTGTGAGAAGACACAAAACAAACTACTGTCTCTGAAAAAGAATGGAAGCCAACTGGAAGAGGTGAATATAAAAAGTGAGCCACTGTCTGACGAAGCATATGATGATGGAGTGGTCATTGATGGGTCCTATCCAGAGAGTGCCACTTCAAGCAGAGTGCAGCCTGAAGGCCCTCCAATCTTGGCTTCATTGGGACTTACACCGAGGAGTGATAAGAAATATGTAGACCCTCGCATGGACTGGCAACGAGTCCATGCCATATTGGACATCATTCAAGATGACGAGGTCATTGATTGTCTACAGTCAACTGAAGAGTTGGATGTCCTACAGCATTCCGACCATGACTCGGATTCAGAAATAGAACTAACATCTGATGTTGAAGTAGATGATTTGGATACAACTTCTGGCTACAAACGTAAAAATGGCGAAACTATATCTAAAGATCCTCTTATATCAGAAGCTGAAATTTATAAAAAAGAGAAGGACTCTTGTATTCAGAAACGAAAAAGAAAGTCCGTGCAAAGATGTTACCCTGAACCTGAGCATGCATGGCAGTTATTGTTTACAGATCAATTACTGGAGGTGATTGTTTCAGCAACAAATGAAAAAATAAGCAGAAAGAATAATTTATCAACTCAAACCAGCATTGATGAAATAAAAACATTAATTGGAATATTGTATATCCAAGGCATAATGAGGCCAATCCATCAAAAGTCCCATGACCTATGGCACAATGACCTAGGCGTCAGTTGCATCAAGAAGGCTATGAAATATGGAAGATTTAAATTTCTTTTGGAAAATTTGAGTTTTAGCGCAAATGTCGGAAGCAGTTTGCAGAATGATGTTATGAAGCGCATGCGTCAAGTATTTGATATATTTGCGAAGAACTGTCGCGACGCATATGATATTGGCAATCAAGTTGTAGCTGATGAGATCATTGTCCCAGTTTATGGACCGTGCCCTTTCCGTTACGAAGTAGTCAAAAACTCCATCAGAAAAAATGGGATCAAGCTAGCTTTATTAATAGATCCTTCCAATTTTTATATAAATAACATTGAAGTGGTAACTATGGAATCGTGTGAACCAGAACATGTAATCACCAAATTAGTGCAACATTTAGATGGATCAAAGAAAACTGTTATAATGGACAGCTGGTTCAGTTCATTGCCTCTTATAACAAAACTGAAGAATGAATTAAAATTATACAGTCTTGCAGCCCTGAATACAAAACATGAGTTACTGATACCTCCACTGTTTGTATCAAAATATAGAAAGAGTGAATCTGTATTGACAGGATTTGTAGATAAAGATAATGTACTGGCATCTTATGTAAACAAACAATATAAATCCGTGAATGTATTGACAAATGAGCCTATGTTGTACAAGAAACAGCCGCATTTCAGATCCGGGACAGCAGTTTGGCAGTACAAAAAGAACCGTTCTGCAGTGGAGGTTGTAGATGTCCTCATGCATTATTACACCACAATGCAGAATTGTAATGATTGGGCTCTATGTTTATTCTTCACAATGCTAAACATTGCTTCTGTAAATGCTCAAGTGATATGGAGTGCAGATAACTCTTCGGCAGTGACACAACGCCGCGTTTTCATTAGAAATTTGGCTGCGAATCTATTAAATGGTGTAGTGCAGTTTACTGGGAATGATGCATCAGAGCGGAAGCTTCTTAGGATCAGACACTCGGTCCAAGGACATGGGACATTGCCAGCCGGTGTCAGAAAACTTTGTGTGATTTGTACGCAAACTACAAAATGCCAACGCAAAACAAGATTCTACTGTACCAAGTGTTGCCAGCCTGGCATCGAAAGCGAGAAAGACGAAGAAGAGGAGGAGTTTGACGAAGAGATGGGTGAGCAACCCGCCCAGTCGTCAAAAGTGAGCATGCCCGAAGTTTCCATCACGGTAATGCGTCCTACGGGGGAGACGCTGCACTCCCGTCAAGGCATCCAGCAACTCGCCTCCAAGGACTGCCTTGTCTGCGGCCGCACTTACAGGTACTCCCACAACGCTCGCAGACACGAGCTTACCGCTCACAGCTTCGACAGATATACAAACAAAGCTTCCAGCTCTAAGAAGTCCTCGTTCTCCCGAATGCAGCCGAAACTCAGGCCAAACCCATTCAATCCCAAAGCCAGGTTAATGCCCAATCCAATCAACCATAAAATGCAACTTATTCCTCCCAAAGTTCTACCACCTAAAGCAGTCACGCAAAAAATTATACCACCTAAACCTATACCCGTAAAACCCAATAAAACGCAACAAAATAATTTACCTTACCCTCTTCGCATCAAAGCTTTAAAAGACTTGCAAATCAAAAAAAAAGAACCACAAATTTTGAAAACTTTGCTCACATCGAAGCCAGAAGTATTAATATCGGAACCAGAAATTATTAATTCTGCTCCAGAAAGCCCAGAAACTCTGATATCTGAACCGGAAATAGCCTCATTTCAAGTTGAGGCAATTTTATCTGAACCTGACGACCAAAATGGTGGTGAAGAAATGGACACAGAAATTCAAGGTACTCAAAACCAAGCGACCTATGATACTCTTGATATGGAGTCTGATAACGAAATAGAAATCGCTAGACAAAAAGAAAATATTGAAGCAGATGGCGACCGCGACGATCATGATGGAGATCATGATATAGATGAAGAAATGCACGATGGTGTCGATAATGTAGATGGTGTTGGCAATGATAACAACGAAGACGAAGAAGATAATCATGACGAAGAAATCACCGAGGCTAAAGCTGCCCATAAGGTCAAACAAGGGGAAGCAAATGAAAAAAGTGAACTCGAGGAACAAGATAATCATGAGGAAAATGACGATGATGATGATCTCCCGCCGGAAGGACTGGCCCCTGTAGTTGAAATAAACGAAGATCTACACACAAATTCGTACAACAGCGAAGCAAATGAAGAAGAAGATACTCTTGACGATACGGTCGATCCCAATAATGAGATAGGTGAATCTGAAGTTAAGGAACTAGATCCGAACAAACAATATGTGACTAAAGCTCAAAGAGAATTCATAGCCAAATATAGTGACATTATTCAACAAATCAATACTAAACGTTGTTTGTGTTGTGACAAAGAATATCCCCGCAGGAAAGCTGTTATACAACACCTGCAGAAAAATGGGCATAAAGTGCCGAAACATACTTGCTACAATTGCGTCATTACGTTTGGTCACATTGGTGCTTTATTGAGCCACATGAGGTCTAATTCGTGCACAGACTTGTGGAAAATTATTCACAATGAAGGTGGTATAACTGATGATATGGTTCTTGAAGATGAACCCAAGAAAGTTCAGTACAAAGATATATTTAATGCAAGGTCTTATGCTTGCAAGTTGTGTCCAGCTAAATTCCAATTAAAGCAGTTTATTATGAAACATGTCCTGGACGTTCATGAAGATGGTCAATCTTTAGTTCCTCTCACTTGCGTACACTGTCGTGCTAGATTCAAAGACAGAGTAATGTGGAAAAAGCACATTCGTAATGGCGATTGTACAGTATATATCGCTTGTGACTTGTGTTCAGAAAAATTCGTTAACATGCCAGATTTCAACGATCATGCGCTAGCTGAACATGCTGGTAGCTTCGACCAGGGTAATGAGAGCAAATGTGTCGATGGTCGTATGACTGAATGCCCAATTTGTAACAAGAAACATACTACTTATCTGAATTTGGTGCGCCATTTAAAGACTGTGCATAACGAAGAAAAGCCTCACTACTGCAAACATTGCGACGCCAAATTTGAACAGACCGCTGATCTAAATAAGCATATTTACATGGCTCATTCTACTGTTGGTTTGGAAACCACGGAACCAGATATGTCAATTGTCAAAGAAGAAGTTGAGGAATATCATTACTCTTGTACAGAATGCAATGCAATATTTGAAACTGTTGACGCTTGGACCGACCATCAAGTAGCAGAGCACCATCAAGTGGCGCATTATTGCGATCAGTGCGAAAAGAAGTTTTTGCGTCCATCGGAACTGGCGGAACACAAAAATACACATTTACGAGTTAAGTTTTATCCTTGTAGTATATGCACAAACTCGTACAGCACTCCGCAGAAGCTTTCAGATCACGTGCAGCAATCGCATCCAGGGGTTGGAGCTCACGTCGCCGGAGAAAGTGAATTTTTCTGTGACATTTGCATCAGATCGTTTAAGAGCCGACAAGCTTACTCCAACCATATGCGCATTCACGCTAAAGTGCCAACTACGAACAGGCGACCTGGTGATAGCAAAATGGGTTTCGCTCCACAGATTGTAGGAAAACCTATCAAGCAAATCAGCGTAGCGCCAACTTCAAGTTTAGTTTTCAAACCTAACCCCAATGTTCCTAATGCTCCTTATTCTTGTGATATTTGTGGAAAAGGATTTATGCATAAGAAAAATATATGGAAACACAAAAAAGTACTTCACGCTGATCTTCTCAATGACCGTAATGACAGCGAAGAGAACACGATGCACGCCTCAACTGAAGAAGATGAGTATAACATTGATGAAAATGGTGCTCTCACGACACCGCAGTTTAACAGTTTTAATTTTTCAAACTTTACTAATAATGTTCAACAACAGCTTACGCAAGGTGCAGCGTACAGTTGTAATATCTGTCCTCAGACCTTTTCGTTCAAGGACAGTTTAATGAAGCACAAGCGCTCGAAACATGGTTATAAAAAAACTAGTTCCGGTAGTGAACCACAATCTCAACCTGCAGAAACTGGGGGCAGGTCTAATTGCACAATATGCAAGATATCATTCTCAGACAAAAAATCTTACTATAGACACAGGAAGAACGTACACAAGTCGACGACCCAAATGTGCAAAATATGTGGGAAACCTCTAAACTCTACACTGGAGCTTTACGAGCATTTGAGAGCAGCTCATGCTCGAGAACTCTTAGGGTATAATGCTAACCAGGGTTCGAGCAAATCGCAAGACAATACACAAGAATTAGAGGATTATGATGTAGACAATGAAGCTGCAGATCCGACTGTAGACTACCAGGCTCGCTATCCTTGTGATACTTGCGGTAAGCAATTCGTTGGGTTGCTTGCTTTGCAGAATCATCAGTGCATAAATCAAATAACTTCTCAACCACAAACGTTTGATTGCGAGATTTGTCACAAGAGTTACACCTCCATCGCTGCATTAAAGAGTCACCGCGGTTGGCACTTACGTTCACCGGATGGGAAAGCGGCTGCGAACAACACTGGTTTGTGGATGCCTCAACATAAAGTCACCAGCAAAGTAAGCAAACACGAGGTTGTCGACCACGGCCCAGTCACCCGAGCCTCACACTCTTCATCGACCGCATCTAAAAGAAGACTGCCACCAGAAGTGGAAGTAACAGTTGTCAACCCTAACAAGAAATTACGCTCTGACGATTCAGTTGAAATGGATCATCAGAATAACTCTGCAAGTGGCTTCGAAGATAAGTACTGTACGATTTGTGATAAAGAATTCACTAAGCGTGCAGCTTATCAACGCCACATGGACGAAGTTCACCAGCCTAATTCAGTTTTCTGTCCGGTCTGTGATAAAAGTTTTACGCGAAAATCCACTCTGCTCGTTCACATGAAGAAGCACTACGAAGGCGGGGAGGGCAGCTCATCTACTGCCAACCAACTGGACGAGGATTACGCGTGTGATCTGTGCGGGGCTCAGTACGATAGCGCGCAGGCTTTGCGAGCTCACCGCATGAGACACCACGGAGAAGATTCAGACCACGAATCAGAGGACGAGGGAAGCCTCGGCACGGCGGCTCCTGGCGAGTTCACCTGCGCGCAATGTGGGGACGGGGTGGCCACACCACGCGATTTGATTGCGCATCGCACTATGCACGCCACTCCCACCAAATACTTCTGCAATATTTGCAAAGTCTATTTTGCAAGAGCACTGGACCTATCGTCGCACACGCGTGCGCGACACGCTGATAGCGAGAAGAGCGCCATGTTTCCTTGCGCGATGTGCGACCGCTTCTACATGAACAAGAAGAGTTTGCAACGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASRIKDCVSIQITENDDLPSKVCRKCVDNVHNWHIFKRVCEKTQNKLLSLKKNGSQLEEVNIKSEPLSDEAYDDGVVIDGSYPESATSSRVQPEGPPILASLGLTPRSDKKYVDPRMDWQRVHAILDIIQDDEVIDCLQSTEELDVLQHSDHDSDSEIELTSDVEVDDLDTTSGYKRKNGETISKDPLISEAEIYKKEKDSCIQKRKRKSVQRCYPEPEHAWQLLFTDQLLEVIVSATNEKISRKNNLSTQTSIDEIKTLIGILYIQGIMRPIHQKSHDLWHNDLGVSCIKKAMKYGRFKFLLENLSFSANVGSSLQNDVMKRMRQVFDIFAKNCRDAYDIGNQVVADEIIVPVYGPCPFRYEVVKNSIRKNGIKLALLIDPSNFYINNIEVVTMESCEPEHVITKLVQHLDGSKKTVIMDSWFSSLPLITKLKNELKLYSLAALNTKHELLIPPLFVSKYRKSESVLTGFVDKDNVLASYVNKQYKSVNVLTNEPMLYKKQPHFRSGTAVWQYKKNRSAVEVVDVLMHYYTTMQNCNDWALCLFFTMLNIASVNAQVIWSADNSSAVTQRRVFIRNLAANLLNGVVQFTGNDASERKLLRIRHSVQGHGTLPAGVRKLCVICTQTTKCQRKTRFYCTKCCQPGIESEKDEEEEEFDEEMGEQPAQSSKVSMPEVSITVMRPTGETLHSRQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKASSSKKSSFSRMQPKLRPNPFNPKARLMPNPINHKMQLIPPKVLPPKAVTQKIIPPKPIPVKPNKTQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLISEPEIINSAPESPETLISEPEIASFQVEAILSEPDDQNGGEEMDTEIQGTQNQATYDTLDMESDNEIEIARQKENIEADGDRDDHDGDHDIDEEMHDGVDNVDGVGNDNNEDEEDNHDEEITEAKAAHKVKQGEANEKSELEEQDNHEENDDDDDLPPEGLAPVVEINEDLHTNSYNSEANEEEDTLDDTVDPNNEIGESEVKELDPNKQYVTKAQREFIAKYSDIIQQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIHNEGGITDDMVLEDEPKKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSLVPLTCVHCRARFKDRVMWKKHIRNGDCTVYIACDLCSEKFVNMPDFNDHALAEHAGSFDQGNESKCVDGRMTECPICNKKHTTYLNLVRHLKTVHNEEKPHYCKHCDAKFEQTADLNKHIYMAHSTVGLETTEPDMSIVKEEVEEYHYSCTECNAIFETVDAWTDHQVAEHHQVAHYCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSDHVQQSHPGVGAHVAGESEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGDSKMGFAPQIVGKPIKQISVAPTSSLVFKPNPNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNIDENGALTTPQFNSFNFSNFTNNVQQQLTQGAAYSCNICPQTFSFKDSLMKHKRSKHGYKKTSSGSEPQSQPAETGGRSNCTICKISFSDKKSYYRHRKNVHKSTTQMCKICGKPLNSTLELYEHLRAAHARELLGYNANQGSSKSQDNTQELEDYDVDNEAADPTVDYQARYPCDTCGKQFVGLLALQNHQCINQITSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDHGPVTRASHSSSTASKRRLPPEVEVTVVNPNKKLRSDDSVEMDHQNNSASGFEDKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSTANQLDEDYACDLCGAQYDSAQALRAHRMRHHGEDSDHESEDEGSLGTAAPGEFTCAQCGDGVATPRDLIAHRTMHATPTKYFCNICKVYFARALDLSSHTRARHADSEKSAMFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -