Basic Information

Gene Symbol
-
Assembly
GCA_948473455.1
Location
OX419598.1:12860589-12892409[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.039 2.8 9.1 1.2 1 23 303 325 303 325 0.97
2 39 0.00031 0.022 15.7 0.6 2 23 386 407 385 407 0.95
3 39 0.071 5.1 8.3 1.0 1 23 411 433 411 433 0.97
4 39 0.0034 0.24 12.4 0.9 1 23 438 461 438 461 0.98
5 39 0.0028 0.2 12.7 0.2 1 23 465 488 465 488 0.94
6 39 0.0028 0.2 12.7 0.1 2 20 506 524 505 530 0.92
7 39 3.3e-05 0.0024 18.8 0.9 3 23 539 560 539 560 0.98
8 39 0.097 6.9 7.9 0.1 3 23 581 602 580 602 0.96
9 39 7.3e-05 0.0052 17.7 1.4 1 23 613 635 613 635 0.98
10 39 1e-05 0.00074 20.4 2.0 1 23 641 663 641 663 0.99
11 39 0.0051 0.37 11.9 1.8 1 23 669 691 669 691 0.98
12 39 0.0051 0.37 11.9 1.8 1 23 701 723 701 723 0.98
13 39 0.0051 0.37 11.9 1.8 1 23 733 755 733 755 0.98
14 39 0.0051 0.37 11.9 1.8 1 23 765 787 765 787 0.98
15 39 0.0051 0.37 11.9 1.8 1 23 797 819 797 819 0.98
16 39 0.0051 0.37 11.9 1.8 1 23 829 851 829 851 0.98
17 39 0.0051 0.37 11.9 1.8 1 23 861 883 861 883 0.98
18 39 0.0051 0.37 11.9 1.8 1 23 893 915 893 915 0.98
19 39 0.0051 0.37 11.9 1.8 1 23 925 947 925 947 0.98
20 39 0.0051 0.37 11.9 1.8 1 23 957 979 957 979 0.98
21 39 0.0051 0.37 11.9 1.8 1 23 1053 1075 1053 1075 0.98
22 39 0.0051 0.37 11.9 1.8 1 23 1085 1107 1085 1107 0.98
23 39 0.0051 0.37 11.9 1.8 1 23 1117 1139 1117 1139 0.98
24 39 0.0051 0.37 11.9 1.8 1 23 1149 1171 1149 1171 0.98
25 39 0.0051 0.37 11.9 1.8 1 23 1181 1203 1181 1203 0.98
26 39 0.0051 0.37 11.9 1.8 1 23 1213 1235 1213 1235 0.98
27 39 0.0051 0.37 11.9 1.8 1 23 1245 1267 1245 1267 0.98
28 39 0.0051 0.37 11.9 1.8 1 23 1277 1299 1277 1299 0.98
29 39 0.0051 0.37 11.9 1.8 1 23 1309 1331 1309 1331 0.98
30 39 0.0051 0.37 11.9 1.8 1 23 1341 1363 1341 1363 0.98
31 39 0.0051 0.37 11.9 1.8 1 23 1373 1395 1373 1395 0.98
32 39 0.0051 0.37 11.9 1.8 1 23 1405 1427 1405 1427 0.98
33 39 0.0051 0.37 11.9 1.8 1 23 1437 1459 1437 1459 0.98
34 39 0.0051 0.37 11.9 1.8 1 23 1501 1523 1501 1523 0.98
35 39 0.0051 0.37 11.9 1.8 1 23 1533 1555 1533 1555 0.98
36 39 0.0051 0.37 11.9 1.8 1 23 1565 1587 1565 1587 0.98
37 39 0.0051 0.37 11.9 1.8 1 23 1597 1619 1597 1619 0.98
38 39 0.0068 0.49 11.5 2.0 1 23 1629 1651 1629 1651 0.98
39 39 0.00014 0.01 16.8 0.2 1 23 1657 1680 1657 1680 0.98

Sequence Information

Coding Sequence
ATGGAAGGGATTATGGAGTGGCCGAAAGTGTGCCGGGTTTGCCTAGCTATGGACGTAAAATTACTAGATCTGCAAATGTACCCCTGGAACACATATTTGTATCCTATTTTTAAAATGAATGCCATAGCGGCCACAGATCTTCCCCCATACGCGTGTATTGAATGTGCCACTTTACTGAAGAAAAATTATGATTTCCGCGAGAAATTTCTTCTTGGTCAGTCGGTTCTTTGTGGCATATTGCAAACAAATGGAAGAATTACAGCAGACCTAATAAAACAAATAGACAGACACGATCTGAAATTAGAGTCGAATCTCCGACACCAGCTTATTAATGAAGAAACTATAATAAATATTACTTATATTGAAACTCCTGAACTTCTTGAGAACCTATTATACGACAAGATTAAAGATGAGCCACCGGACATCGAACAAGAATTAGAAGCAGATGAGAAGATTAATATATCTATAGAAGATGATGGTTTTGATGATTTCCCTTTTGGTGCCTTATCAACGGACGACGACGAGCCGCTGTCTCTACACAAGACCAATAAAGAAAAGAAGACAAAAGATAAGAAAAAGAATAAGAAAAGTACAAAGAAGAAAAAAGAAATCCAATCTAATGATGAAATACTAGAGAAGGTGGAAGTTCCAGAAGGTTTATCACAAGAGGAGGCCGATTCTCAGTCGCAACCAGAGACGGAACCAGTTAAGAGAAAGAGAGGGCGTCCGAGAAAGACAGAGATAGCGCGAGTGCAGAAGCAACGGCGCACGAACAACACGGGCGGGGTGGGGGCGGATAATGACGTAGATTTGGAGGAGTGCGTCACTGTTATTAAACTTACGGAAGAACAGCAGCGCGAGGAGGTAGCTAAGCGTCAGTTGTCATCGAACTACATGAACGCGCCGTACCAGTGCAACCTCTGCTTCAAGGGGTTCGTGGAGCTCACCGCCTACAACCACCACGCGGCCAAGCACGACCCCATTTCAAGAATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAAGTGCGGGAGATATAAAGTGTGACGTATGCAAGTTCCGGTTCACGACGAAGCGAGCGCTGCAGAAGCACGCCGCCATACACGAGAAGAAATATGCCTGCAACTCATGCAACTACATCTCCAAGACCACGACGCAAGCTAAACAGCATATGAGATGGCATAAAGGGGTGACTTATAAGTGCCAATACTGTGACGAAATTTCTACCAAATGGACGTCATACTTGAGCCACGTTCGCATCAAGCACCCGTCGGAGTTCATCTGCGGCGTGTGCGGGTACTCGTTCGTCAGCAAGCTGGGGCTCACCATGCACAAGACCATGATGCACAAGGATGTCATAGAAAACGCAGAATCGTCAAAGGATCAGAAATCGGGTCTGTACTGCGAGGAGTGCGACGTAAAGTTCGTGACACTAGACGCGTACAAGAGACACATGGTCATGGCCACCAAACATACCGCCAACAATGCCAAGCCCGGGTGTCGAATATGCGGCGAAAGCTTTAAGACCTCCGAAGAGTTACGACTGCACCGGCGCAAGGAGCACGCGCGGAAGCGACCCAAGAACTACGGCAAGAAACCATCGCACATCACCTGGCCCGCTCCCTGCGACCACTGTCCGGAGATAATCCCGAACGCTCGCGAGCTGTGGACGCACTTCCGGCGCGCGCACCCGGACAAGAGCTACCCCATACAGAAGAGCCACGTGTGCGACATCTGCGGGAAGACCTTCCGGGGCAACGCGTTCCTAGTATACCACAAGCGCACCCACTTCGAGGAGCGCGCGTACAAGTGCGAGAAGTGCCCCAAGGCGTTCTTCAACCGAACCAACCTGCAGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGAGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGAGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGAGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGATGCACGAGAAGACACACTCAGACCACCGGCCCTATCCGTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAAGGAGCGCTGGATAGACACTATCGGAGCCACACGGGCGTCAAACCGTACGAATGCGAGGTGTGCGGCAAAGCGTTCGGCCAATCAAACAGCAGGAAACTGCACGTGCGCACCGTGCACTTCAAACAACCCGCGCCCTACGTCAGCAGAGCGAGACAGGAGAGGCGCAAGCAACACACCGACACACACAACACACACACATACACTATAGGACCGAGTACCGAACACTTCCTCACGTAA
Protein Sequence
MEGIMEWPKVCRVCLAMDVKLLDLQMYPWNTYLYPIFKMNAIAATDLPPYACIECATLLKKNYDFREKFLLGQSVLCGILQTNGRITADLIKQIDRHDLKLESNLRHQLINEETIINITYIETPELLENLLYDKIKDEPPDIEQELEADEKINISIEDDGFDDFPFGALSTDDDEPLSLHKTNKEKKTKDKKKNKKSTKKKKEIQSNDEILEKVEVPEGLSQEEADSQSQPETEPVKRKRGRPRKTEIARVQKQRRTNNTGGVGADNDVDLEECVTVIKLTEEQQREEVAKRQLSSNYMNAPYQCNLCFKGFVELTAYNHHAAKHDPISRMSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKFNIPRRTLRNHLSAGDIKCDVCKFRFTTKRALQKHAAIHEKKYACNSCNYISKTTTQAKQHMRWHKGVTYKCQYCDEISTKWTSYLSHVRIKHPSEFICGVCGYSFVSKLGLTMHKTMMHKDVIENAESSKDQKSGLYCEECDVKFVTLDAYKRHMVMATKHTANNAKPGCRICGESFKTSEELRLHRRKEHARKRPKNYGKKPSHITWPAPCDHCPEIIPNARELWTHFRRAHPDKSYPIQKSHVCDICGKTFRGNAFLVYHKRTHFEERAYKCEKCPKAFFNRTNLQMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVSFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVSFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVSFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRMHEKTHSDHRPYPCDVCFKAFKCKGALDRHYRSHTGVKPYECEVCGKAFGQSNSRKLHVRTVHFKQPAPYVSRARQERRKQHTDTHNTHTYTIGPSTEHFLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01403376;
90% Identity
iTF_01403376;
80% Identity
iTF_01403376;